Cow genome map

Conread name: rthg35_b22.y1

Conread position: 5-185
Cow position:
Alignm length: 191
Alignm identity: 150
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 11, 80

Conread position: 5-317
Cow position:
Alignm length: 320
Alignm identity: 224
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 73, 12

Conread position: 5-320
Cow position:
Alignm length: 319
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 6

Conread position: 5-320
Cow position:
Alignm length: 324
Alignm identity: 227
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 69, 8

Conread position: 5-320
Cow position:
Alignm length: 319
Alignm identity: 221
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 154, 12

Conread position: 5-320
Cow position:
Alignm length: 318
Alignm identity: 220
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 161, 11

Conread position: 5-320
Cow position:
Alignm length: 322
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 8

Conread position: 9-166
Cow position:
Alignm length: 163
Alignm identity: 134
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 39, 0

Conread position: 9-198
Cow position:
Alignm length: 191
Alignm identity: 148
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 68, 124

Conread position: 9-272
Cow position:
Alignm length: 273
Alignm identity: 184
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 31, 151

Conread position: 10-108
Cow position:
Alignm length: 102
Alignm identity: 89
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 38, 98

Conread position: 10-112
Cow position:
Alignm length: 108
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 10-118
Cow position:
Alignm length: 115
Alignm identity: 100
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 66, 0

Conread position: 10-122
Cow position:
Alignm length: 120
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 10-122
Cow position:
Alignm length: 119
Alignm identity: 102
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 69, 0

Conread position: 10-124
Cow position:
Alignm length: 118
Alignm identity: 100
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 36, 97

Conread position: 10-125
Cow position:
Alignm length: 116
Alignm identity: 94
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 10-135
Cow position:
Alignm length: 135
Alignm identity: 109
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 36, 74

Conread position: 10-142
Cow position:
Alignm length: 140
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 36

Conread position: 10-144
Cow position:
Alignm length: 138
Alignm identity: 110
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 10-150
Cow position:
Alignm length: 145
Alignm identity: 110
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 10-156
Cow position:
Alignm length: 152
Alignm identity: 125
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 10-157
Cow position:
Alignm length: 150
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 66, 36

Conread position: 10-157
Cow position:
Alignm length: 152
Alignm identity: 121
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 91, 36

Conread position: 10-157
Cow position:
Alignm length: 148
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 10-163
Cow position:
Alignm length: 158
Alignm identity: 131
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 36, 118

Conread position: 10-164
Cow position:
Alignm length: 159
Alignm identity: 125
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 38, 15

Conread position: 10-165
Cow position:
Alignm length: 162
Alignm identity: 130
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 66, 35

Conread position: 10-165
Cow position:
Alignm length: 164
Alignm identity: 133
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 10-172
Cow position:
Alignm length: 170
Alignm identity: 123
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 10-174
Cow position:
Alignm length: 169
Alignm identity: 133
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 65, 19

Conread position: 10-174
Cow position:
Alignm length: 170
Alignm identity: 133
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 10-181
Cow position:
Alignm length: 179
Alignm identity: 142
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 43, 0

Conread position: 10-182
Cow position:
Alignm length: 177
Alignm identity: 138
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 66, 0

Conread position: 10-183
Cow position:
Alignm length: 176
Alignm identity: 136
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 66, 36

Conread position: 10-186
Cow position:
Alignm length: 179
Alignm identity: 144
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 153, 36

Conread position: 10-186
Cow position:
Alignm length: 178
Alignm identity: 144
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 153, 18

Conread position: 10-189
Cow position:
Alignm length: 183
Alignm identity: 139
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 116, 68

Conread position: 10-191
Cow position:
Alignm length: 191
Alignm identity: 151
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 39, 146

Conread position: 10-192
Cow position:
Alignm length: 186
Alignm identity: 146
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 10-193
Cow position:
Alignm length: 187
Alignm identity: 139
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 37, 65

Conread position: 10-193
Cow position:
Alignm length: 192
Alignm identity: 148
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 15, 37

Conread position: 10-193
Cow position:
Alignm length: 191
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 57, 68

Conread position: 10-195
Cow position:
Alignm length: 187
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 167, 68

Conread position: 10-195
Cow position:
Alignm length: 193
Alignm identity: 150
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 138, 36

Conread position: 10-195
Cow position:
Alignm length: 188
Alignm identity: 156
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 66, 22

Conread position: 10-198
Cow position:
Alignm length: 198
Alignm identity: 154
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 39, 14

Conread position: 10-198
Cow position:
Alignm length: 197
Alignm identity: 160
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 33, 73

Conread position: 10-198
Cow position:
Alignm length: 196
Alignm identity: 153
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 65, 36

Conread position: 10-198
Cow position:
Alignm length: 195
Alignm identity: 154
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 70, 36

Conread position: 10-212
Cow position:
Alignm length: 213
Alignm identity: 166
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 66, 36

Conread position: 10-212
Cow position:
Alignm length: 209
Alignm identity: 161
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 10-224
Cow position:
Alignm length: 223
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 32

Conread position: 10-225
Cow position:
Alignm length: 221
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 68

Conread position: 10-225
Cow position:
Alignm length: 222
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 32

Conread position: 10-236
Cow position:
Alignm length: 233
Alignm identity: 170
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 57, 68

Conread position: 10-237
Cow position:
Alignm length: 233
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 176

Conread position: 10-243
Cow position:
Alignm length: 241
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 37

Conread position: 10-246
Cow position:
Alignm length: 244
Alignm identity: 182
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 68, 36

Conread position: 10-252
Cow position:
Alignm length: 249
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 18

Conread position: 10-254
Cow position:
Alignm length: 252
Alignm identity: 190
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 38, 188

Conread position: 10-263
Cow position:
Alignm length: 257
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 66

Conread position: 10-270
Cow position:
Alignm length: 269
Alignm identity: 189
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 69, 232

Conread position: 10-284
Cow position:
Alignm length: 278
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 80

Conread position: 10-288
Cow position:
Alignm length: 289
Alignm identity: 211
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 138

Conread position: 10-294
Cow position:
Alignm length: 289
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 85

Conread position: 10-308
Cow position:
Alignm length: 300
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 138

Conread position: 10-311
Cow position:
Alignm length: 307
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 96

Conread position: 10-315
Cow position:
Alignm length: 309
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 219

Conread position: 10-318
Cow position:
Alignm length: 316
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 34

Conread position: 10-318
Cow position:
Alignm length: 311
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 36

Conread position: 10-318
Cow position:
Alignm length: 316
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 34

Conread position: 10-318
Cow position:
Alignm length: 313
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 36

Conread position: 10-318
Cow position:
Alignm length: 313
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 37

Conread position: 10-318
Cow position:
Alignm length: 318
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 36

Conread position: 10-319
Cow position:
Alignm length: 313
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 64

Conread position: 10-319
Cow position:
Alignm length: 323
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 34

Conread position: 10-319
Cow position:
Alignm length: 316
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 68

Conread position: 10-319
Cow position:
Alignm length: 310
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 10-320
Cow position:
Alignm length: 314
Alignm identity: 214
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 153, 65

Conread position: 10-320
Cow position:
Alignm length: 318
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 122

Conread position: 10-320
Cow position:
Alignm length: 318
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 10-320
Cow position:
Alignm length: 328
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 65

Conread position: 10-320
Cow position:
Alignm length: 316
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 35

Conread position: 10-320
Cow position:
Alignm length: 320
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 13

Conread position: 10-320
Cow position:
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 80

Conread position: 10-320
Cow position:
Alignm length: 339
Alignm identity: 247
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 145, 36

Conread position: 10-320
Cow position:
Alignm length: 319
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 145

Conread position: 10-320
Cow position:
Alignm length: 316
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 69

Conread position: 10-320
Cow position:
Alignm length: 316
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 33

Conread position: 10-320
Cow position:
Alignm length: 316
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 252

Conread position: 10-320
Cow position:
Alignm length: 313
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 66

Conread position: 10-320
Cow position:
Alignm length: 319
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 10-320
Cow position:
Alignm length: 313
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 69

Conread position: 10-320
Cow position:
Alignm length: 315
Alignm identity: 208
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 88, 35

Conread position: 10-325
Cow position:
Alignm length: 322
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 203

Conread position: 10-325
Cow position:
Alignm length: 320
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 36

Conread position: 10-330
Cow position:
Alignm length: 329
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 34

Conread position: 11-165
Cow position:
Alignm length: 157
Alignm identity: 128
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 65, 34

Conread position: 11-318
Cow position:
Alignm length: 308
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 13-133
Cow position:
Alignm length: 127
Alignm identity: 106
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 13-169
Cow position:
Alignm length: 164
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 72

Conread position: 13-172
Cow position:
Alignm length: 168
Alignm identity: 136
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 32, 0

Conread position: 13-184
Cow position:
Alignm length: 175
Alignm identity: 139
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 63, 28

Conread position: 13-192
Cow position:
Alignm length: 183
Alignm identity: 141
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 33, 91

Conread position: 13-199
Cow position:
Alignm length: 187
Alignm identity: 140
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 31, 0

Conread position: 13-212
Cow position:
Alignm length: 203
Alignm identity: 159
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 65, 33

Conread position: 13-218
Cow position:
Alignm length: 219
Alignm identity: 155
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 13-247
Cow position:
Alignm length: 243
Alignm identity: 182
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 60, 0

Conread position: 13-257
Cow position:
Alignm length: 258
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 33

Conread position: 13-270
Cow position:
Alignm length: 262
Alignm identity: 193
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 150, 62

Conread position: 13-285
Cow position:
Alignm length: 277
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 33

Conread position: 13-311
Cow position:
Alignm length: 300
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 68

Conread position: 13-316
Cow position:
Alignm length: 307
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 13-319
Cow position:
Alignm length: 310
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 15

Conread position: 13-320
Cow position:
Alignm length: 320
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 33

Conread position: 13-320
Cow position:
Alignm length: 315
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 31

Conread position: 13-320
Cow position:
Alignm length: 317
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 234

Conread position: 13-320
Cow position:
Alignm length: 319
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 33

Conread position: 13-320
Cow position:
Alignm length: 314
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 128

Conread position: 14-164
Cow position:
Alignm length: 151
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 14-186
Cow position:
Alignm length: 180
Alignm identity: 139
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 32, 0

Conread position: 14-197
Cow position:
Alignm length: 188
Alignm identity: 148
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 61, 32

Conread position: 14-198
Cow position:
Alignm length: 193
Alignm identity: 152
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 62, 0

Conread position: 14-199
Cow position:
Alignm length: 189
Alignm identity: 146
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 64, 32

Conread position: 14-205
Cow position:
Alignm length: 198
Alignm identity: 159
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 37, 64

Conread position: 14-246
Cow position:
Alignm length: 235
Alignm identity: 176
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 64, 31

Conread position: 14-320
Cow position:
Alignm length: 311
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 64

Conread position: 15-137
Cow position:
Alignm length: 125
Alignm identity: 107
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 63, 0

Conread position: 15-140
Cow position:
Alignm length: 132
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 73

Conread position: 15-143
Cow position:
Alignm length: 129
Alignm identity: 106
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 15-186
Cow position:
Alignm length: 178
Alignm identity: 141
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 61, 31

Conread position: 15-186
Cow position:
Alignm length: 182
Alignm identity: 142
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 63, 31

Conread position: 15-283
Cow position:
Alignm length: 273
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 30

Conread position: 15-303
Cow position:
Alignm length: 290
Alignm identity: 214
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 152, 59

Conread position: 15-318
Cow position:
Alignm length: 307
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 31

Conread position: 15-320
Cow position:
Alignm length: 308
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 116

Conread position: 16-309
Cow position:
Alignm length: 301
Alignm identity: 217
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 85, 37

Conread position: 16-319
Cow position:
Alignm length: 305
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 59

Conread position: 17-241
Cow position:
Alignm length: 227
Alignm identity: 167
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 61

Conread position: 18-194
Cow position:
Alignm length: 181
Alignm identity: 149
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 58, 134

Conread position: 30-320
Cow position:
Alignm length: 297
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 143

Conread position: 33-310
Cow position:
Alignm length: 282
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Show alignments to all cow chromosomes.