Cow genome map

Conread name: rthg35_b22.y1

Conread position: 1-320
Cow position: chr27:30389194-30388871 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 43

Conread position: 4-168
Cow position: chr27:20037097-20036935 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 134
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 7, 0

Conread position: 5-276
Cow position: chr27:29798970-29799244 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 202
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 47, 6

Conread position: 5-299
Cow position: chr27:5882487-5882188 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 214
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 66, 8

Conread position: 5-316
Cow position: chr27:14530820-14530501 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 226
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 73, 143

Conread position: 5-317
Cow position: chr27:2332642-2332328 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 11

Conread position: 5-320
Cow position: chr27:1294384-1294072 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 8

Conread position: 5-320
Cow position: chr27:2390320-2390640 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 11

Conread position: 5-320
Cow position: chr27:9335333-9335015 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 229
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 73, 11

Conread position: 5-325
Cow position: chr27:21349717-21349397 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 12

Conread position: 7-320
Cow position: chr27:27684088-27683769 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 12

Conread position: 8-320
Cow position: chr27:22549753-22549440 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 165

Conread position: 9-146
Cow position: chr27:13841407-13841548 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 16

Conread position: 9-177
Cow position: chr27:27003241-27003078 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 153, 33

Conread position: 9-225
Cow position: chr27:26436848-26436623 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 44, 75

Conread position: 9-319
Cow position: chr27:9090770-9090456 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 37

Conread position: 9-320
Cow position: chr27:22426799-22426483 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 159

Conread position: 10-102
Cow position: chr27:8168397-8168302 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 85
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 10-102
Cow position: chr27:10395225-10395134 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 86
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 44

Conread position: 10-121
Cow position: chr27:4011711-4011820 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 36, 69

Conread position: 10-125
Cow position: chr27:7731217-7731098 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 10-127
Cow position: chr27:29905636-29905755 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 87, 43

Conread position: 10-128
Cow position: chr27:28009027-28008903 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 10-132
Cow position: chr27:14343432-14343310 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 66, 35

Conread position: 10-133
Cow position: chr27:20118439-20118559 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 10-134
Cow position: chr27:11480597-11480470 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 10-137
Cow position: chr27:30872026-30871897 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 66, 0

Conread position: 10-140
Cow position: chr27:27438474-27438339 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 10-142
Cow position: chr27:15643205-15643343 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 115
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 67, 0

Conread position: 10-143
Cow position: chr27:22268535-22268673 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 116
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 66, 35

Conread position: 10-159
Cow position: chr27:27550708-27550563 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 121
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 36, 0

Conread position: 10-160
Cow position: chr27:13252040-13252195 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 129
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 66, 47

Conread position: 10-165
Cow position: chr27:20592015-20592174 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 133
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 42, 0

Conread position: 10-165
Cow position: chr27:25676258-25676417 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 33

Conread position: 10-165
Cow position: chr27:27554649-27554496 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 10-166
Cow position: chr27:30988830-30988990 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 129
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 90, 64

Conread position: 10-166
Cow position: chr27:30989811-30989651 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 128
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 90, 64

Conread position: 10-172
Cow position: chr27:28001776-28001620 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 136
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 153, 60

Conread position: 10-173
Cow position: chr27:18031029-18030860 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 38, 159

Conread position: 10-173
Cow position: chr27:29283375-29283211 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 133
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 66, 154

Conread position: 10-176
Cow position: chr27:2683110-2682941 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 10-176
Cow position: chr27:20354618-20354782 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 140
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 153, 36

Conread position: 10-176
Cow position: chr27:29250910-29251082 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 10-180
Cow position: chr27:19647905-19647738 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 137
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 68, 36

Conread position: 10-180
Cow position: chr27:30915041-30915207 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 153, 36

Conread position: 10-183
Cow position: chr27:22454744-22454570 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 73, 36

Conread position: 10-185
Cow position: chr27:30359439-30359606 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 156, 36

Conread position: 10-186
Cow position: chr27:706985-707159 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 140
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 66, 33

Conread position: 10-186
Cow position: chr27:26163418-26163590 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 85

Conread position: 10-186
Cow position: chr27:26239059-26239236 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 61, 36

Conread position: 10-186
Cow position: chr27:28164372-28164199 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 157, 36

Conread position: 10-189
Cow position: chr27:21453044-21452855 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 152
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 10-191
Cow position: chr27:22771785-22771975 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 149
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 39, 0

Conread position: 10-193
Cow position: chr27:30765070-30765251 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 146
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 36, 77

Conread position: 10-195
Cow position: chr27:1183843-1183655 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 154
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 35, 15

Conread position: 10-195
Cow position: chr27:2592582-2592762 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 150
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 96, 0

Conread position: 10-195
Cow position: chr27:28038307-28038116 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 65, 36

Conread position: 10-197
Cow position: chr27:27640968-27640769 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 164
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 35, 0

Conread position: 10-198
Cow position: chr27:2012070-2011879 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 155
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 14, 137

Conread position: 10-198
Cow position: chr27:6058531-6058726 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 36, 0

Conread position: 10-199
Cow position: chr27:23554296-23554098 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 156
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 33, 179

Conread position: 10-208
Cow position: chr27:22498591-22498788 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 138, 36

Conread position: 10-213
Cow position: chr27:14902618-14902410 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 54

Conread position: 10-213
Cow position: chr27:27259642-27259845 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 165
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 66, 180

Conread position: 10-221
Cow position: chr27:11081228-11081443 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 138

Conread position: 10-227
Cow position: chr27:12516225-12516450 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 179
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 36, 196

Conread position: 10-229
Cow position: chr27:26509127-26508906 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 177
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 66, 132

Conread position: 10-232
Cow position: chr27:24331755-24331987 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 182
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 41, 71

Conread position: 10-232
Cow position: chr27:28921863-28921641 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 34

Conread position: 10-238
Cow position: chr27:2957435-2957668 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 186
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 65, 33

Conread position: 10-246
Cow position: chr27:12429434-12429684 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 10-256
Cow position: chr27:14632871-14633120 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 186
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 49, 68

Conread position: 10-256
Cow position: chr27:22723671-22723431 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 69

Conread position: 10-257
Cow position: chr27:7971603-7971853 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 184
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 63, 0

Conread position: 10-257
Cow position: chr27:26413219-26412975 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 36

Conread position: 10-257
Cow position: chr27:29399849-29400100 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 150

Conread position: 10-264
Cow position: chr27:6500092-6500345 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 201
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 38, 212

Conread position: 10-272
Cow position: chr27:28931760-28931491 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 200

Conread position: 10-282
Cow position: chr27:20758018-20757750 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 202
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 71, 36

Conread position: 10-284
Cow position: chr27:23576505-23576229 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 196
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 90, 45

Conread position: 10-285
Cow position: chr27:29831656-29831377 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 70

Conread position: 10-286
Cow position: chr27:22035343-22035065 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 36

Conread position: 10-292
Cow position: chr27:30792904-30792612 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 213
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 68, 13

Conread position: 10-297
Cow position: chr27:30868706-30868417 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 23

Conread position: 10-304
Cow position: chr27:21408527-21408221 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 260

Conread position: 10-304
Cow position: chr27:27038806-27038511 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 88

Conread position: 10-308
Cow position: chr27:8291972-8291677 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 71

Conread position: 10-310
Cow position: chr27:4386027-4385732 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 34

Conread position: 10-316
Cow position: chr27:4673053-4673357 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 36

Conread position: 10-317
Cow position: chr27:12246691-12246988 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 228
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 88, 34

Conread position: 10-318
Cow position: chr27:815400-815709 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 36

Conread position: 10-318
Cow position: chr27:10307270-10306932 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 240
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 34, 65

Conread position: 10-318
Cow position: chr27:16786856-16787176 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 10-318
Cow position: chr27:17397417-17397110 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 158

Conread position: 10-318
Cow position: chr27:19388048-19388361 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 36

Conread position: 10-318
Cow position: chr27:19717956-19718263 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 36

Conread position: 10-318
Cow position: chr27:23455121-23454806 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 235
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 34, 160

Conread position: 10-318
Cow position: chr27:26807529-26807222 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 207
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 67, 36

Conread position: 10-318
Cow position: chr27:30582773-30583081 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 59

Conread position: 10-320
Cow position: chr27:732603-732909 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 68

Conread position: 10-320
Cow position: chr27:1353621-1353941 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 95

Conread position: 10-320
Cow position: chr27:8942649-8942346 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 67

Conread position: 10-320
Cow position: chr27:11435288-11434985 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 68

Conread position: 10-320
Cow position: chr27:13317925-13317619 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 64

Conread position: 10-320
Cow position: chr27:13875765-13876072 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 36

Conread position: 10-320
Cow position: chr27:15454245-15454559 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 36

Conread position: 10-320
Cow position: chr27:15925375-15925681 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 69

Conread position: 10-320
Cow position: chr27:20637032-20636730 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 228
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 168, 33

Conread position: 10-320
Cow position: chr27:22179760-22179440 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 27

Conread position: 10-320
Cow position: chr27:22418733-22418421 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 36

Conread position: 10-320
Cow position: chr27:23128490-23128798 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 105

Conread position: 10-320
Cow position: chr27:24227764-24227447 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 61

Conread position: 10-320
Cow position: chr27:25923824-25924129 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 65

Conread position: 10-320
Cow position: chr27:27020069-27019757 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 196

Conread position: 10-320
Cow position: chr27:27040639-27040942 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 192

Conread position: 10-320
Cow position: chr27:28018367-28018682 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 47

Conread position: 10-320
Cow position: chr27:30177540-30177228 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 43

Conread position: 10-322
Cow position: chr27:16620022-16620336 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 36

Conread position: 10-325
Cow position: chr27:29309056-29309372 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 220
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 34, 65

Conread position: 10-339
Cow position: chr27:26428099-26427763 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 11-163
Cow position: chr27:31499102-31499256 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 90

Conread position: 11-226
Cow position: chr27:2930564-2930344 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 169
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 37, 0

Conread position: 11-270
Cow position: chr27:30362278-30362538 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 32

Conread position: 11-318
Cow position: chr27:22603205-22603506 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 67

Conread position: 12-317
Cow position: chr27:27064404-27064101 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 32

Conread position: 13-149
Cow position: chr27:9169608-9169470 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 63, 0

Conread position: 13-164
Cow position: chr27:18739421-18739577 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 36, 0

Conread position: 13-171
Cow position: chr27:30844039-30843881 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 97, 69

Conread position: 13-173
Cow position: chr27:21569806-21569644 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 132
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 34, 51

Conread position: 13-182
Cow position: chr27:12596802-12596964 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 13-195
Cow position: chr27:4812843-4812656 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 153
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 63, 33

Conread position: 13-211
Cow position: chr27:18593304-18593503 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 157
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 63, 32

Conread position: 13-229
Cow position: chr27:18507679-18507887 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 53, 21

Conread position: 13-240
Cow position: chr27:6550494-6550717 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 33

Conread position: 13-262
Cow position: chr27:23882341-23882077 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 201
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 63, 125

Conread position: 13-319
Cow position: chr27:21350984-21350671 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 308

Conread position: 13-320
Cow position: chr27:10992391-10992713 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 5

Conread position: 13-320
Cow position: chr27:15867433-15867733 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 73

Conread position: 13-320
Cow position: chr27:15871197-15871508 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 88

Conread position: 13-320
Cow position: chr27:18558396-18558713 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 240
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 51

Conread position: 14-126
Cow position: chr27:23890977-23891089 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 98
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 30, 75

Conread position: 14-135
Cow position: chr27:27270504-27270377 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 110
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 37, 63

Conread position: 14-153
Cow position: chr27:20803480-20803622 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 14-163
Cow position: chr27:911047-910896 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 56

Conread position: 14-174
Cow position: chr27:25277175-25277336 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 133
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 30, 74

Conread position: 14-177
Cow position: chr27:24027012-24027175 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 132
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 32, 53

Conread position: 14-179
Cow position: chr27:19685673-19685509 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 132
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 149, 32

Conread position: 14-181
Cow position: chr27:1498355-1498521 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 136
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 62, 32

Conread position: 14-198
Cow position: chr27:21419031-21418844 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 147
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 37, 175

Conread position: 14-229
Cow position: chr27:16263373-16263588 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 38, 84

Conread position: 14-255
Cow position: chr27:7935120-7934883 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 171
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 39, 63

Conread position: 14-255
Cow position: chr27:23930014-23930245 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 178
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 27, 0

Conread position: 14-269
Cow position: chr27:28190179-28189922 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 30

Conread position: 14-284
Cow position: chr27:18544032-18544308 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 14-311
Cow position: chr27:23070321-23070026 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 28

Conread position: 14-318
Cow position: chr27:25380031-25380341 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 32

Conread position: 14-320
Cow position: chr27:21978101-21977791 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 84

Conread position: 15-165
Cow position: chr27:16705285-16705437 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 15-165
Cow position: chr27:18434437-18434281 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 126
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 61, 135

Conread position: 15-176
Cow position: chr27:18215089-18215258 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 137
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 29, 0

Conread position: 15-225
Cow position: chr27:31147637-31147422 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 169
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 29, 92

Conread position: 15-255
Cow position: chr27:28518328-28518558 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 15-257
Cow position: chr27:19589509-19589758 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 188
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 62, 168

Conread position: 15-318
Cow position: chr27:15315544-15315834 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 220
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 27, 53

Conread position: 15-320
Cow position: chr27:16237944-16238242 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 29

Conread position: 15-320
Cow position: chr27:27141633-27141938 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 31

Conread position: 15-320
Cow position: chr27:30921198-30921497 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 215
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 34, 50

Conread position: 16-165
Cow position: chr27:11296304-11296448 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 63, 29

Conread position: 16-197
Cow position: chr27:26218746-26218918 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 148
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 148, 57

Conread position: 16-201
Cow position: chr27:26625165-26625352 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 155
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 59, 170

Conread position: 16-320
Cow position: chr27:9337557-9337859 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 175

Conread position: 17-256
Cow position: chr27:2643885-2643657 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 181
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 61, 0

Conread position: 17-276
Cow position: chr27:23124316-23124054 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 188
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 56, 121

Conread position: 17-317
Cow position: chr27:18922491-18922793 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 30

Conread position: 17-320
Cow position: chr27:21393462-21393161 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 56

Conread position: 19-320
Cow position: chr27:22440179-22440488 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 74

Conread position: 22-186
Cow position: chr27:17926586-17926425 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 139
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 51, 0

Conread position: 22-320
Cow position: chr27:22655336-22655031 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 300

Conread position: 22-324
Cow position: chr27:7290062-7289758 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 0

Conread position: 22-324
Cow position: chr27:29812425-29812120 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 216
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 56, 64

Conread position: 25-320
Cow position: chr27:27521960-27521658 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 53

Conread position: 28-164
Cow position: chr27:30670790-30670927 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 115
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 48, 0

Show alignments to all cow chromosomes.