Cow genome map
| Conread name: | rthg35_b22.y1 |
| Conread position: | 5-160 |
| Cow position: | chr28:2888364-2888206 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 46, 79 |
| Conread position: | 5-219 |
| Cow position: | chr28:7144721-7144507 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 64, 6 |
| Conread position: | 5-294 |
| Cow position: | chr28:3187352-3187647 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 207 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 66, 12 |
| Conread position: | 5-305 |
| Cow position: | chr28:11505082-11505385 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 215 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 95, 8 |
| Conread position: | 5-310 |
| Cow position: | chr28:7746280-7745961 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 12 |
| Conread position: | 5-317 |
| Cow position: | chr28:32785037-32785350 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 11 |
| Conread position: | 5-320 |
| Cow position: | chr28:1810809-1811125 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 8 |
| Conread position: | 5-320 |
| Cow position: | chr28:5212528-5212209 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 8 |
| Conread position: | 5-320 |
| Cow position: | chr28:21766959-21767280 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 226 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 73, 8 |
| Conread position: | 5-320 |
| Cow position: | chr28:26418810-26419130 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 8 |
| Conread position: | 6-320 |
| Cow position: | chr28:23616339-23616018 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 7 |
| Conread position: | 7-135 |
| Cow position: | chr28:10845049-10844920 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 69, 11 |
| Conread position: | 9-96 |
| Cow position: | chr28:19015355-19015444 (view UCSC Genome Browser custom track) |
| Alignm length: | 90 |
| Alignm identity: | 80 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 9-124 |
| Cow position: | chr28:118123-118243 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 70, 57 |
| Conread position: | 9-192 |
| Cow position: | chr28:2862794-2862605 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 68, 36 |
| Conread position: | 9-193 |
| Cow position: | chr28:26719279-26719103 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 150, 37 |
| Conread position: | 9-257 |
| Cow position: | chr28:4188458-4188209 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 199 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 69, 27 |
| Conread position: | 9-304 |
| Cow position: | chr28:22304777-22304490 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 47 |
| Conread position: | 9-317 |
| Cow position: | chr28:19295431-19295743 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 37 |
| Conread position: | 9-320 |
| Cow position: | chr28:16003980-16003681 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 221 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 150, 19 |
| Conread position: | 9-320 |
| Cow position: | chr28:17316802-17316481 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 195 |
| Conread position: | 10-112 |
| Cow position: | chr28:26264734-26264628 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 91 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 10-116 |
| Cow position: | chr28:11829010-11829117 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 66, 36 |
| Conread position: | 10-126 |
| Cow position: | chr28:23724527-23724645 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 68, 33 |
| Conread position: | 10-137 |
| Cow position: | chr28:25459456-25459325 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 88, 68 |
| Conread position: | 10-156 |
| Cow position: | chr28:9108374-9108222 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 67, 36 |
| Conread position: | 10-157 |
| Cow position: | chr28:5188476-5188622 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 10-157 |
| Cow position: | chr28:18625157-18625002 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 10-164 |
| Cow position: | chr28:10053405-10053566 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 10-165 |
| Cow position: | chr28:8408662-8408511 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 66, 36 |
| Conread position: | 10-165 |
| Cow position: | chr28:12951357-12951204 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 10-165 |
| Cow position: | chr28:19394544-19394402 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 14 |
| Conread position: | 10-165 |
| Cow position: | chr28:28076482-28076636 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 82, 58 |
| Conread position: | 10-168 |
| Cow position: | chr28:11818035-11818194 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 94, 36 |
| Conread position: | 10-172 |
| Cow position: | chr28:34430494-34430663 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 10-176 |
| Cow position: | chr28:4914167-4914342 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 10-177 |
| Cow position: | chr28:3077917-3077752 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 10-185 |
| Cow position: | chr28:2898926-2898746 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 10-186 |
| Cow position: | chr28:13607813-13607635 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 64, 36 |
| Conread position: | 10-186 |
| Cow position: | chr28:22321354-22321172 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 10-186 |
| Cow position: | chr28:22345947-22345769 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 65, 36 |
| Conread position: | 10-189 |
| Cow position: | chr28:33051956-33051767 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 66, 36 |
| Conread position: | 10-193 |
| Cow position: | chr28:13865770-13865588 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 158, 36 |
| Conread position: | 10-193 |
| Cow position: | chr28:27218252-27218063 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 66, 36 |
| Conread position: | 10-194 |
| Cow position: | chr28:21502323-21502137 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 40, 32 |
| Conread position: | 10-195 |
| Cow position: | chr28:34230159-34229970 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 152 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 85, 65 |
| Conread position: | 10-198 |
| Cow position: | chr28:16243831-16244021 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 79, 18 |
| Conread position: | 10-198 |
| Cow position: | chr28:16252932-16253117 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 160 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 10-198 |
| Cow position: | chr28:24996661-24996849 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 84, 30 |
| Conread position: | 10-198 |
| Cow position: | chr28:26533477-26533280 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 10-202 |
| Cow position: | chr28:22485176-22484983 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 160 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 39, 108 |
| Conread position: | 10-211 |
| Cow position: | chr28:15263789-15263999 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 38, 188 |
| Conread position: | 10-212 |
| Cow position: | chr28:23410397-23410599 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 35, 60 |
| Conread position: | 10-218 |
| Cow position: | chr28:26784537-26784750 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 10-223 |
| Cow position: | chr28:27428671-27428469 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 156, 35 |
| Conread position: | 10-229 |
| Cow position: | chr28:23007806-23008021 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 153, 36 |
| Conread position: | 10-232 |
| Cow position: | chr28:15043934-15044152 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 66, 36 |
| Conread position: | 10-244 |
| Cow position: | chr28:10669503-10669266 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 57, 81 |
| Conread position: | 10-252 |
| Cow position: | chr28:15008089-15007846 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 36 |
| Conread position: | 10-254 |
| Cow position: | chr28:12758574-12758825 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 160 |
| Conread position: | 10-255 |
| Cow position: | chr28:2124356-2124120 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 38, 56 |
| Conread position: | 10-256 |
| Cow position: | chr28:4307976-4308218 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 71 |
| Conread position: | 10-257 |
| Cow position: | chr28:4880338-4880585 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 36 |
| Conread position: | 10-257 |
| Cow position: | chr28:19222668-19222915 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 180 |
| Conread position: | 10-260 |
| Cow position: | chr28:7512659-7512914 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 198 |
| Conread position: | 10-269 |
| Cow position: | chr28:7590253-7590516 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 219 |
| Conread position: | 10-272 |
| Cow position: | chr28:23676068-23675812 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 190 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 10-273 |
| Cow position: | chr28:22371749-22372012 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 36 |
| Conread position: | 10-277 |
| Cow position: | chr28:7549132-7549403 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 36 |
| Conread position: | 10-291 |
| Cow position: | chr28:13267714-13267426 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 216 |
| Conread position: | 10-295 |
| Cow position: | chr28:34442828-34443122 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 212 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 38, 246 |
| Conread position: | 10-302 |
| Cow position: | chr28:13474228-13473941 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 36 |
| Conread position: | 10-304 |
| Cow position: | chr28:8347659-8347353 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 72 |
| Conread position: | 10-304 |
| Cow position: | chr28:22132853-22132558 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 47 |
| Conread position: | 10-304 |
| Cow position: | chr28:23480330-23480628 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 197 |
| Conread position: | 10-306 |
| Cow position: | chr28:3474888-3474602 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 218 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 68, 79 |
| Conread position: | 10-308 |
| Cow position: | chr28:10745140-10744833 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 10-313 |
| Cow position: | chr28:17738146-17738454 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 249 |
| Conread position: | 10-317 |
| Cow position: | chr28:21363673-21363378 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 36 |
| Conread position: | 10-318 |
| Cow position: | chr28:3256725-3256419 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 32 |
| Conread position: | 10-318 |
| Cow position: | chr28:3914639-3914328 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 10-318 |
| Cow position: | chr28:7865252-7864949 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 36 |
| Conread position: | 10-318 |
| Cow position: | chr28:11451535-11451856 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 316 |
| Conread position: | 10-318 |
| Cow position: | chr28:12430535-12430224 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 35 |
| Conread position: | 10-318 |
| Cow position: | chr28:19079915-19080253 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 247 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 36, 310 |
| Conread position: | 10-318 |
| Cow position: | chr28:20124711-20124407 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 35 |
| Conread position: | 10-319 |
| Cow position: | chr28:7268008-7268316 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 36 |
| Conread position: | 10-319 |
| Cow position: | chr28:13371245-13371559 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 68 |
| Conread position: | 10-319 |
| Cow position: | chr28:25806500-25806219 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 82 |
| Conread position: | 10-319 |
| Cow position: | chr28:26922439-26922753 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 46 |
| Conread position: | 10-320 |
| Cow position: | chr28:3161142-3161467 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 35 |
| Conread position: | 10-320 |
| Cow position: | chr28:4022313-4021999 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 173 |
| Conread position: | 10-320 |
| Cow position: | chr28:5769128-5768818 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 233 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 43, 71 |
| Conread position: | 10-320 |
| Cow position: | chr28:5817771-5817465 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 66 |
| Conread position: | 10-320 |
| Cow position: | chr28:11786784-11787090 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 10-320 |
| Cow position: | chr28:12048775-12049097 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 36 |
| Conread position: | 10-320 |
| Cow position: | chr28:12946876-12946560 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 153 |
| Conread position: | 10-320 |
| Cow position: | chr28:16085252-16084943 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 93 |
| Conread position: | 10-320 |
| Cow position: | chr28:18717193-18717509 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 185 |
| Conread position: | 10-320 |
| Cow position: | chr28:20759992-20760307 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 36 |
| Conread position: | 10-320 |
| Cow position: | chr28:21103908-21104228 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 150 |
| Conread position: | 10-320 |
| Cow position: | chr28:21598326-21598637 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 36 |
| Conread position: | 10-320 |
| Cow position: | chr28:22170788-22171114 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 206 |
| Conread position: | 10-320 |
| Cow position: | chr28:22308577-22308276 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 53 |
| Conread position: | 10-320 |
| Cow position: | chr28:22323196-22322880 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 10-320 |
| Cow position: | chr28:23721265-23720959 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 50, 68 |
| Conread position: | 10-320 |
| Cow position: | chr28:25727306-25726997 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 157 |
| Conread position: | 10-320 |
| Cow position: | chr28:30293658-30293971 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 197 |
| Conread position: | 10-320 |
| Cow position: | chr28:34082089-34082399 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 59 |
| Conread position: | 10-321 |
| Cow position: | chr28:20313203-20312888 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 121 |
| Conread position: | 10-322 |
| Cow position: | chr28:23840129-23839826 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 84 |
| Conread position: | 10-333 |
| Cow position: | chr28:11827421-11827099 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 67 |
| Conread position: | 11-112 |
| Cow position: | chr28:9928356-9928455 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 11-286 |
| Cow position: | chr28:30303265-30303537 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 134 |
| Conread position: | 11-316 |
| Cow position: | chr28:11752214-11752523 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 35 |
| Conread position: | 12-146 |
| Cow position: | chr28:4884337-4884476 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 64, 34 |
| Conread position: | 12-254 |
| Cow position: | chr28:10888594-10888345 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 12-320 |
| Cow position: | chr28:31142040-31142347 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 166 |
| Conread position: | 13-136 |
| Cow position: | chr28:27313817-27313948 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 13-142 |
| Cow position: | chr28:22739717-22739595 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 13-165 |
| Cow position: | chr28:8656816-8656964 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 64, 85 |
| Conread position: | 13-186 |
| Cow position: | chr28:16386583-16386756 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 34, 90 |
| Conread position: | 13-195 |
| Cow position: | chr28:19026087-19026262 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 150, 32 |
| Conread position: | 13-198 |
| Cow position: | chr28:23460076-23459876 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 13-250 |
| Cow position: | chr28:2819690-2819446 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 185 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 37, 217 |
| Conread position: | 13-269 |
| Cow position: | chr28:17637942-17638197 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 33 |
| Conread position: | 13-276 |
| Cow position: | chr28:7698055-7698317 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 101 |
| Conread position: | 13-280 |
| Cow position: | chr28:2960907-2961162 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 63, 30 |
| Conread position: | 13-282 |
| Cow position: | chr28:14933891-14933616 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 13-310 |
| Cow position: | chr28:18790939-18790638 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 144 |
| Conread position: | 13-319 |
| Cow position: | chr28:23793380-23793702 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 28 |
| Conread position: | 13-320 |
| Cow position: | chr28:5771291-5770984 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 33 |
| Conread position: | 13-320 |
| Cow position: | chr28:10529559-10529849 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 61 |
| Conread position: | 13-320 |
| Cow position: | chr28:10606703-10606994 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 229 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 38, 67 |
| Conread position: | 13-320 |
| Cow position: | chr28:16388556-16388267 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 13-320 |
| Cow position: | chr28:18139528-18139840 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 31 |
| Conread position: | 13-320 |
| Cow position: | chr28:26269252-26268951 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 29 |
| Conread position: | 13-322 |
| Cow position: | chr28:18354398-18354692 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 224 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 162, 65 |
| Conread position: | 14-122 |
| Cow position: | chr28:18760124-18760228 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 61, 23 |
| Conread position: | 14-122 |
| Cow position: | chr28:19024065-19023947 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 14-157 |
| Cow position: | chr28:13447621-13447488 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 14-181 |
| Cow position: | chr28:14649272-14649102 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 62, 31 |
| Conread position: | 14-186 |
| Cow position: | chr28:13241904-13242074 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 149, 49 |
| Conread position: | 14-189 |
| Cow position: | chr28:4057905-4057733 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 148, 30 |
| Conread position: | 14-211 |
| Cow position: | chr28:616307-616127 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 193, 30 |
| Conread position: | 14-227 |
| Cow position: | chr28:31110080-31110296 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 14-255 |
| Cow position: | chr28:26685038-26684796 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 192 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 62, 31 |
| Conread position: | 14-290 |
| Cow position: | chr28:34878046-34878323 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 179 |
| Conread position: | 14-320 |
| Cow position: | chr28:4138747-4139062 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 235 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 61, 41 |
| Conread position: | 14-320 |
| Cow position: | chr28:5931276-5930967 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 9 |
| Conread position: | 14-320 |
| Cow position: | chr28:10478419-10478709 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 64, 144 |
| Conread position: | 14-320 |
| Cow position: | chr28:11047515-11047192 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 230 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 52, 64 |
| Conread position: | 14-320 |
| Cow position: | chr28:21355147-21354840 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 29 |
| Conread position: | 14-320 |
| Cow position: | chr28:21380802-21380495 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 32 |
| Conread position: | 14-325 |
| Cow position: | chr28:25071051-25070712 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 35, 70 |
| Conread position: | 15-137 |
| Cow position: | chr28:5224637-5224512 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 38, 22 |
| Conread position: | 15-167 |
| Cow position: | chr28:751153-750995 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 35, 140 |
| Conread position: | 15-185 |
| Cow position: | chr28:5236675-5236849 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 60, 144 |
| Conread position: | 15-225 |
| Cow position: | chr28:16450780-16450980 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 15-258 |
| Cow position: | chr28:6059542-6059791 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 35, 186 |
| Conread position: | 15-294 |
| Cow position: | chr28:16109865-16109595 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 63 |
| Conread position: | 15-324 |
| Cow position: | chr28:25700944-25701248 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 59 |
| Conread position: | 17-127 |
| Cow position: | chr28:10999753-10999859 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 17-316 |
| Cow position: | chr28:3480193-3479885 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 19-319 |
| Cow position: | chr28:1837911-1837623 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 54, 24 |
| Conread position: | 22-291 |
| Cow position: | chr28:4215291-4215015 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 200 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 45, 196 |
| Conread position: | 28-320 |
| Cow position: | chr28:22279284-22279568 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 96 |
Show alignments to all cow chromosomes.