Cow genome map
| Conread name: | rthg35_b22.y1 | 
| Conread position: | 1-209 | 
| Cow position: | chr6:51398773-51398562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 10, 23 | 
| Conread position: | 4-176 | 
| Cow position: | chr6:54864702-54864872 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 7e-40 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 5-275 | 
| Cow position: | chr6:47039112-47039378 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 8e-31 | 
| Alignm gaps (pig, cow): | 66, 12 | 
| Conread position: | 5-287 | 
| Cow position: | chr6:15137053-15137337 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 64, 12 | 
| Conread position: | 5-307 | 
| Cow position: | chr6:17111047-17111354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 58, 8 | 
| Conread position: | 5-307 | 
| Cow position: | chr6:17122505-17122201 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 92, 8 | 
| Conread position: | 5-317 | 
| Cow position: | chr6:8206307-8205990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 2.99878e-43 | 
| Alignm gaps (pig, cow): | 66, 8 | 
| Conread position: | 5-317 | 
| Cow position: | chr6:60877416-60877098 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 4.2039e-45 | 
| Alignm gaps (pig, cow): | 73, 11 | 
| Conread position: | 5-319 | 
| Cow position: | chr6:52431061-52431381 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 6 | 
| Conread position: | 5-320 | 
| Cow position: | chr6:1264571-1264259 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 62, 11 | 
| Conread position: | 5-320 | 
| Cow position: | chr6:3271376-3271681 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 146, 8 | 
| Conread position: | 5-320 | 
| Cow position: | chr6:28111721-28112038 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 73, 8 | 
| Conread position: | 5-320 | 
| Cow position: | chr6:48872242-48872556 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 73, 8 | 
| Conread position: | 5-320 | 
| Cow position: | chr6:55538156-55538473 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 11 | 
| Conread position: | 5-323 | 
| Cow position: | chr6:40814484-40814158 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 8 | 
| Conread position: | 5-334 | 
| Cow position: | chr6:26413346-26413022 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 296, 11 | 
| Conread position: | 6-165 | 
| Cow position: | chr6:54701509-54701346 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 8e-21 | 
| Alignm gaps (pig, cow): | 67, 7 | 
| Conread position: | 8-147 | 
| Cow position: | chr6:59104567-59104432 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 8e-21 | 
| Alignm gaps (pig, cow): | 45, 54 | 
| Conread position: | 8-197 | 
| Cow position: | chr6:14949514-14949708 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 8-243 | 
| Cow position: | chr6:47150755-47150506 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 35, 0 | 
| Conread position: | 9-176 | 
| Cow position: | chr6:6098320-6098488 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 15, 38 | 
| Conread position: | 9-179 | 
| Cow position: | chr6:53519660-53519829 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 6e-39 | 
| Alignm gaps (pig, cow): | 70, 61 | 
| Conread position: | 9-294 | 
| Cow position: | chr6:5673200-5672906 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 243 | 
| Conread position: | 10-101 | 
| Cow position: | chr6:60667382-60667291 (view UCSC Genome Browser custom track) | 
| Alignm length: | 93 | 
| Alignm identity: | 81 | 
| Alignm E-value: | 9e-22 | 
| Alignm gaps (pig, cow): | 42, 69 | 
| Conread position: | 10-108 | 
| Cow position: | chr6:48988402-48988300 (view UCSC Genome Browser custom track) | 
| Alignm length: | 103 | 
| Alignm identity: | 86 | 
| Alignm E-value: | 8e-21 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 10-112 | 
| Cow position: | chr6:19996581-19996479 (view UCSC Genome Browser custom track) | 
| Alignm length: | 104 | 
| Alignm identity: | 91 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 88, 68 | 
| Conread position: | 10-116 | 
| Cow position: | chr6:16316270-16316166 (view UCSC Genome Browser custom track) | 
| Alignm length: | 108 | 
| Alignm identity: | 96 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 36, 66 | 
| Conread position: | 10-117 | 
| Cow position: | chr6:29266166-29266059 (view UCSC Genome Browser custom track) | 
| Alignm length: | 109 | 
| Alignm identity: | 90 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 36, 69 | 
| Conread position: | 10-120 | 
| Cow position: | chr6:22254022-22254136 (view UCSC Genome Browser custom track) | 
| Alignm length: | 115 | 
| Alignm identity: | 93 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 10-123 | 
| Cow position: | chr6:4692017-4692136 (view UCSC Genome Browser custom track) | 
| Alignm length: | 120 | 
| Alignm identity: | 96 | 
| Alignm E-value: | 8e-21 | 
| Alignm gaps (pig, cow): | 68, 0 | 
| Conread position: | 10-127 | 
| Cow position: | chr6:27888312-27888192 (view UCSC Genome Browser custom track) | 
| Alignm length: | 123 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 35, 13 | 
| Conread position: | 10-130 | 
| Cow position: | chr6:60739978-60739856 (view UCSC Genome Browser custom track) | 
| Alignm length: | 123 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 7e-30 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 10-133 | 
| Cow position: | chr6:12542971-12543095 (view UCSC Genome Browser custom track) | 
| Alignm length: | 126 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 68, 36 | 
| Conread position: | 10-134 | 
| Cow position: | chr6:50984188-50984060 (view UCSC Genome Browser custom track) | 
| Alignm length: | 130 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 94, 68 | 
| Conread position: | 10-135 | 
| Cow position: | chr6:44984292-44984162 (view UCSC Genome Browser custom track) | 
| Alignm length: | 132 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 65, 80 | 
| Conread position: | 10-136 | 
| Cow position: | chr6:40834507-40834638 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 8e-21 | 
| Alignm gaps (pig, cow): | 66, 34 | 
| Conread position: | 10-138 | 
| Cow position: | chr6:16764690-16764809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 129 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 36, 0 | 
| Conread position: | 10-138 | 
| Cow position: | chr6:53453733-53453601 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 8e-21 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 10-140 | 
| Cow position: | chr6:19013029-19012900 (view UCSC Genome Browser custom track) | 
| Alignm length: | 132 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 37, 66 | 
| Conread position: | 10-141 | 
| Cow position: | chr6:15447241-15447378 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 9e-22 | 
| Alignm gaps (pig, cow): | 60, 35 | 
| Conread position: | 10-142 | 
| Cow position: | chr6:54288036-54287909 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 38, 69 | 
| Conread position: | 10-144 | 
| Cow position: | chr6:12669067-12668934 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 9e-22 | 
| Alignm gaps (pig, cow): | 42, 73 | 
| Conread position: | 10-144 | 
| Cow position: | chr6:65264576-65264708 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 10-145 | 
| Cow position: | chr6:60819478-60819341 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 10-146 | 
| Cow position: | chr6:9839132-9838987 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 32, 0 | 
| Conread position: | 10-147 | 
| Cow position: | chr6:11246725-11246589 (view UCSC Genome Browser custom track) | 
| Alignm length: | 140 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 66, 36 | 
| Conread position: | 10-155 | 
| Cow position: | chr6:1703780-1703630 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 68, 34 | 
| Conread position: | 10-157 | 
| Cow position: | chr6:47799254-47799112 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 67, 82 | 
| Conread position: | 10-161 | 
| Cow position: | chr6:8788075-8788227 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 90, 63 | 
| Conread position: | 10-164 | 
| Cow position: | chr6:416061-415899 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 10-164 | 
| Cow position: | chr6:28318366-28318216 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 36, 0 | 
| Conread position: | 10-165 | 
| Cow position: | chr6:12092031-12092178 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 42, 0 | 
| Conread position: | 10-165 | 
| Cow position: | chr6:16191636-16191473 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 37, 109 | 
| Conread position: | 10-165 | 
| Cow position: | chr6:16423662-16423505 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 84, 36 | 
| Conread position: | 10-165 | 
| Cow position: | chr6:33277005-33276845 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 39, 97 | 
| Conread position: | 10-165 | 
| Cow position: | chr6:37199568-37199739 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 37, 0 | 
| Conread position: | 10-165 | 
| Cow position: | chr6:48187617-48187775 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 39, 70 | 
| Conread position: | 10-165 | 
| Cow position: | chr6:52412823-52412660 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 8e-31 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 10-165 | 
| Cow position: | chr6:53731484-53731327 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 10-166 | 
| Cow position: | chr6:14850752-14850909 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 36, 0 | 
| Conread position: | 10-169 | 
| Cow position: | chr6:46400449-46400604 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 145, 65 | 
| Conread position: | 10-170 | 
| Cow position: | chr6:58732344-58732513 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 10-171 | 
| Cow position: | chr6:46245355-46245524 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 10-171 | 
| Cow position: | chr6:59069662-59069829 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 68, 36 | 
| Conread position: | 10-172 | 
| Cow position: | chr6:52025690-52025857 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 10-173 | 
| Cow position: | chr6:48425359-48425524 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 7e-30 | 
| Alignm gaps (pig, cow): | 36, 87 | 
| Conread position: | 10-173 | 
| Cow position: | chr6:66131268-66131105 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 43, 70 | 
| Conread position: | 10-175 | 
| Cow position: | chr6:15782559-15782730 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 19, 0 | 
| Conread position: | 10-175 | 
| Cow position: | chr6:20157293-20157120 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 38, 49 | 
| Conread position: | 10-176 | 
| Cow position: | chr6:2896718-2896545 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 4e-35 | 
| Alignm gaps (pig, cow): | 38, 113 | 
| Conread position: | 10-176 | 
| Cow position: | chr6:7989447-7989619 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 39, 141 | 
| Conread position: | 10-176 | 
| Cow position: | chr6:38641456-38641292 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 153, 33 | 
| Conread position: | 10-176 | 
| Cow position: | chr6:47989147-47988984 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 66, 36 | 
| Conread position: | 10-182 | 
| Cow position: | chr6:57405161-57405336 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 57, 36 | 
| Conread position: | 10-185 | 
| Cow position: | chr6:17997352-17997530 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 10-186 | 
| Cow position: | chr6:21110927-21110753 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 7e-40 | 
| Alignm gaps (pig, cow): | 153, 61 | 
| Conread position: | 10-187 | 
| Cow position: | chr6:18968818-18968991 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 66, 36 | 
| Conread position: | 10-189 | 
| Cow position: | chr6:38614778-38614605 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 5e-37 | 
| Alignm gaps (pig, cow): | 153, 34 | 
| Conread position: | 10-191 | 
| Cow position: | chr6:7190157-7190340 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 8e-31 | 
| Alignm gaps (pig, cow): | 64, 55 | 
| Conread position: | 10-191 | 
| Cow position: | chr6:29239902-29239722 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 68, 86 | 
| Conread position: | 10-191 | 
| Cow position: | chr6:38207529-38207716 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 66, 35 | 
| Conread position: | 10-191 | 
| Cow position: | chr6:59301858-59302047 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 10-193 | 
| Cow position: | chr6:15300856-15301040 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 5e-37 | 
| Alignm gaps (pig, cow): | 64, 82 | 
| Conread position: | 10-193 | 
| Cow position: | chr6:38441138-38440959 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 68, 45 | 
| Conread position: | 10-193 | 
| Cow position: | chr6:50090608-50090417 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 10-194 | 
| Cow position: | chr6:389132-388947 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 5e-37 | 
| Alignm gaps (pig, cow): | 66, 36 | 
| Conread position: | 10-194 | 
| Cow position: | chr6:45160332-45160515 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 5e-37 | 
| Alignm gaps (pig, cow): | 33, 0 | 
| Conread position: | 10-195 | 
| Cow position: | chr6:20605898-20605709 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 66, 36 | 
| Conread position: | 10-195 | 
| Cow position: | chr6:37149150-37148974 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 64, 0 | 
| Conread position: | 10-195 | 
| Cow position: | chr6:60239426-60239613 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 66, 161 | 
| Conread position: | 10-195 | 
| Cow position: | chr6:66874312-66874137 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 153, 36 | 
| Conread position: | 10-197 | 
| Cow position: | chr6:5462090-5462275 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 8.00001e-41 | 
| Alignm gaps (pig, cow): | 35, 93 | 
| Conread position: | 10-198 | 
| Cow position: | chr6:16746305-16746112 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 33, 98 | 
| Conread position: | 10-198 | 
| Cow position: | chr6:44194580-44194773 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 2.99878e-43 | 
| Alignm gaps (pig, cow): | 61, 36 | 
| Conread position: | 10-199 | 
| Cow position: | chr6:54884948-54885142 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 10-200 | 
| Cow position: | chr6:49002771-49002954 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 64, 0 | 
| Conread position: | 10-204 | 
| Cow position: | chr6:130199-130398 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 36 | 
| Conread position: | 10-204 | 
| Cow position: | chr6:54430788-54430584 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 37, 0 | 
| Conread position: | 10-211 | 
| Cow position: | chr6:9736682-9736880 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 83, 47 | 
| Conread position: | 10-211 | 
| Cow position: | chr6:61113719-61113509 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 8.99634e-43 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 10-220 | 
| Cow position: | chr6:27110556-27110343 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 67, 159 | 
| Conread position: | 10-220 | 
| Cow position: | chr6:53711077-53710866 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 66, 42 | 
| Conread position: | 10-229 | 
| Cow position: | chr6:64449354-64449133 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 4.2039e-45 | 
| Alignm gaps (pig, cow): | 39, 120 | 
| Conread position: | 10-234 | 
| Cow position: | chr6:16103232-16103466 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 43, 102 | 
| Conread position: | 10-238 | 
| Cow position: | chr6:60350333-60350567 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 6e-39 | 
| Alignm gaps (pig, cow): | 66, 36 | 
| Conread position: | 10-239 | 
| Cow position: | chr6:5114083-5114318 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 66, 33 | 
| Conread position: | 10-239 | 
| Cow position: | chr6:35471557-35471795 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 4.2039e-45 | 
| Alignm gaps (pig, cow): | 66, 36 | 
| Conread position: | 10-242 | 
| Cow position: | chr6:7103267-7103503 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 39, 178 | 
| Conread position: | 10-242 | 
| Cow position: | chr6:48281961-48281723 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 10-243 | 
| Cow position: | chr6:52562205-52562441 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 61, 191 | 
| Conread position: | 10-243 | 
| Cow position: | chr6:54365368-54365596 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 167, 68 | 
| Conread position: | 10-245 | 
| Cow position: | chr6:42961398-42961642 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 4.2039e-45 | 
| Alignm gaps (pig, cow): | 40, 0 | 
| Conread position: | 10-245 | 
| Cow position: | chr6:50746949-50746702 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 128 | 
| Conread position: | 10-250 | 
| Cow position: | chr6:57118975-57119207 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 18, 63 | 
| Conread position: | 10-252 | 
| Cow position: | chr6:61515229-61515481 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 4.2039e-45 | 
| Alignm gaps (pig, cow): | 35, 0 | 
| Conread position: | 10-253 | 
| Cow position: | chr6:6264605-6264363 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 90, 36 | 
| Conread position: | 10-256 | 
| Cow position: | chr6:38218633-38218378 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 36 | 
| Conread position: | 10-256 | 
| Cow position: | chr6:57164389-57164141 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 101 | 
| Conread position: | 10-257 | 
| Cow position: | chr6:28559386-28559132 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 215 | 
| Conread position: | 10-257 | 
| Cow position: | chr6:54368936-54369183 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 181 | 
| Conread position: | 10-257 | 
| Cow position: | chr6:62479201-62479452 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 4.2039e-45 | 
| Alignm gaps (pig, cow): | 20, 69 | 
| Conread position: | 10-268 | 
| Cow position: | chr6:15937889-15938162 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 84, 36 | 
| Conread position: | 10-269 | 
| Cow position: | chr6:19508478-19508730 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 187, 36 | 
| Conread position: | 10-273 | 
| Cow position: | chr6:31526005-31525749 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 34 | 
| Conread position: | 10-280 | 
| Cow position: | chr6:21587454-21587731 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 0 | 
| Conread position: | 10-281 | 
| Cow position: | chr6:46558016-46557747 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 36, 66 | 
| Conread position: | 10-284 | 
| Cow position: | chr6:12500824-12500543 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 65 | 
| Conread position: | 10-287 | 
| Cow position: | chr6:16700227-16699945 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 208 | 
| Conread position: | 10-287 | 
| Cow position: | chr6:60859337-60859620 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 200 | 
| Conread position: | 10-288 | 
| Cow position: | chr6:32121873-32121593 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 36 | 
| Conread position: | 10-292 | 
| Cow position: | chr6:27851743-27852026 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 5, 67 | 
| Conread position: | 10-297 | 
| Cow position: | chr6:51835360-51835076 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 153, 75 | 
| Conread position: | 10-297 | 
| Cow position: | chr6:54140772-54140492 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 69 | 
| Conread position: | 10-302 | 
| Cow position: | chr6:10176334-10176630 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 73 | 
| Conread position: | 10-304 | 
| Cow position: | chr6:2607577-2607280 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 36 | 
| Conread position: | 10-304 | 
| Cow position: | chr6:10332128-10332440 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 56 | 
| Conread position: | 10-304 | 
| Cow position: | chr6:35842617-35842327 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 86 | 
| Conread position: | 10-304 | 
| Cow position: | chr6:62925035-62925327 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 149, 36 | 
| Conread position: | 10-304 | 
| Cow position: | chr6:67187646-67187363 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 0 | 
| Conread position: | 10-305 | 
| Cow position: | chr6:28482982-28482679 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 10-306 | 
| Cow position: | chr6:445283-444991 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 179 | 
| Conread position: | 10-310 | 
| Cow position: | chr6:54867476-54867179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 68 | 
| Conread position: | 10-311 | 
| Cow position: | chr6:51674875-51674569 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 65 | 
| Conread position: | 10-311 | 
| Cow position: | chr6:58076192-58075887 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 198 | 
| Conread position: | 10-316 | 
| Cow position: | chr6:32210666-32210972 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 36 | 
| Conread position: | 10-317 | 
| Cow position: | chr6:28477140-28476830 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 36 | 
| Conread position: | 10-317 | 
| Cow position: | chr6:39093698-39093415 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 7e-40 | 
| Alignm gaps (pig, cow): | 270, 36 | 
| Conread position: | 10-317 | 
| Cow position: | chr6:49398652-49398964 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 36 | 
| Conread position: | 10-318 | 
| Cow position: | chr6:4864586-4864886 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 10-318 | 
| Cow position: | chr6:9751083-9751393 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 154, 34 | 
| Conread position: | 10-318 | 
| Cow position: | chr6:24781594-24781912 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 0 | 
| Conread position: | 10-318 | 
| Cow position: | chr6:36928617-36928305 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 36 | 
| Conread position: | 10-318 | 
| Cow position: | chr6:42565651-42565338 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 138 | 
| Conread position: | 10-318 | 
| Cow position: | chr6:47305302-47304980 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 182 | 
| Conread position: | 10-318 | 
| Cow position: | chr6:48169908-48169597 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 87 | 
| Conread position: | 10-318 | 
| Cow position: | chr6:63047541-63047229 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 69 | 
| Conread position: | 10-319 | 
| Cow position: | chr6:30826070-30826401 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 66, 36 | 
| Conread position: | 10-319 | 
| Cow position: | chr6:56849974-56849653 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 153, 36 | 
| Conread position: | 10-320 | 
| Cow position: | chr6:1770236-1770544 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 20 | 
| Conread position: | 10-320 | 
| Cow position: | chr6:1783815-1784115 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 88, 65 | 
| Conread position: | 10-320 | 
| Cow position: | chr6:3978700-3979011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 70 | 
| Conread position: | 10-320 | 
| Cow position: | chr6:5095585-5095900 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 81 | 
| Conread position: | 10-320 | 
| Cow position: | chr6:6067729-6068038 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 154, 53 | 
| Conread position: | 10-320 | 
| Cow position: | chr6:6614400-6614085 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 36 | 
| Conread position: | 10-320 | 
| Cow position: | chr6:8562682-8562366 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 36 | 
| Conread position: | 10-320 | 
| Cow position: | chr6:8804568-8804893 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 36 | 
| Conread position: | 10-320 | 
| Cow position: | chr6:9008649-9008950 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 34 | 
| Conread position: | 10-320 | 
| Cow position: | chr6:12928081-12927773 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 153, 209 | 
| Conread position: | 10-320 | 
| Cow position: | chr6:14839062-14839376 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 145 | 
| Conread position: | 10-320 | 
| Cow position: | chr6:16411153-16410848 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 0 | 
| Conread position: | 10-320 | 
| Cow position: | chr6:17557344-17557025 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 10-320 | 
| Cow position: | chr6:18080545-18080866 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 0 | 
| Conread position: | 10-320 | 
| Cow position: | chr6:18988175-18987870 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 10-320 | 
| Cow position: | chr6:21004636-21004306 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 189 | 
| Conread position: | 10-320 | 
| Cow position: | chr6:21311786-21312105 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 202 | 
| Conread position: | 10-320 | 
| Cow position: | chr6:32126026-32125717 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 30 | 
| Conread position: | 10-320 | 
| Cow position: | chr6:33302373-33302061 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 70 | 
| Conread position: | 10-320 | 
| Cow position: | chr6:35103371-35103674 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 53, 0 | 
| Conread position: | 10-320 | 
| Cow position: | chr6:36470604-36470919 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 69 | 
| Conread position: | 10-320 | 
| Cow position: | chr6:40032155-40031843 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 36 | 
| Conread position: | 10-320 | 
| Cow position: | chr6:44099049-44098738 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 186 | 
| Conread position: | 10-320 | 
| Cow position: | chr6:46634219-46633913 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 8.00001e-41 | 
| Alignm gaps (pig, cow): | 52, 68 | 
| Conread position: | 10-320 | 
| Cow position: | chr6:47540493-47540175 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 13 | 
| Conread position: | 10-320 | 
| Cow position: | chr6:52248169-52248472 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 67, 36 | 
| Conread position: | 10-320 | 
| Cow position: | chr6:53178601-53178289 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 155 | 
| Conread position: | 10-320 | 
| Cow position: | chr6:61631646-61631963 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 203 | 
| Conread position: | 10-320 | 
| Cow position: | chr6:65862650-65862336 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 18 | 
| Conread position: | 10-320 | 
| Cow position: | chr6:67214707-67214392 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 105 | 
| Conread position: | 10-323 | 
| Cow position: | chr6:42518938-42518617 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 0 | 
| Conread position: | 10-323 | 
| Cow position: | chr6:55040249-55040570 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 10-325 | 
| Cow position: | chr6:54647559-54647880 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 96 | 
| Conread position: | 11-184 | 
| Cow position: | chr6:59620632-59620455 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 5e-37 | 
| Alignm gaps (pig, cow): | 37, 13 | 
| Conread position: | 11-291 | 
| Cow position: | chr6:9375405-9375692 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 233 | 
| Conread position: | 11-318 | 
| Cow position: | chr6:48946409-48946713 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 66, 50 | 
| Conread position: | 11-319 | 
| Cow position: | chr6:31635729-31636036 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 33 | 
| Conread position: | 13-112 | 
| Cow position: | chr6:50509638-50509537 (view UCSC Genome Browser custom track) | 
| Alignm length: | 102 | 
| Alignm identity: | 90 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 64, 0 | 
| Conread position: | 13-116 | 
| Cow position: | chr6:19351195-19351299 (view UCSC Genome Browser custom track) | 
| Alignm length: | 106 | 
| Alignm identity: | 88 | 
| Alignm E-value: | 9e-22 | 
| Alignm gaps (pig, cow): | 63, 33 | 
| Conread position: | 13-126 | 
| Cow position: | chr6:31847261-31847375 (view UCSC Genome Browser custom track) | 
| Alignm length: | 116 | 
| Alignm identity: | 92 | 
| Alignm E-value: | 8e-21 | 
| Alignm gaps (pig, cow): | 63, 42 | 
| Conread position: | 13-155 | 
| Cow position: | chr6:25008669-25008530 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 63, 33 | 
| Conread position: | 13-182 | 
| Cow position: | chr6:24515234-24515405 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 63, 30 | 
| Conread position: | 13-186 | 
| Cow position: | chr6:60442378-60442203 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 38, 57 | 
| Conread position: | 13-190 | 
| Cow position: | chr6:37783379-37783190 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 33, 0 | 
| Conread position: | 13-191 | 
| Cow position: | chr6:49685543-49685364 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 62, 40 | 
| Conread position: | 13-198 | 
| Cow position: | chr6:68049396-68049208 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 4.2039e-45 | 
| Alignm gaps (pig, cow): | 40, 0 | 
| Conread position: | 13-207 | 
| Cow position: | chr6:62966922-62967124 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 32, 90 | 
| Conread position: | 13-225 | 
| Cow position: | chr6:3952477-3952270 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 13-226 | 
| Cow position: | chr6:2423703-2423493 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 9e-32 | 
| Alignm gaps (pig, cow): | 28, 68 | 
| Conread position: | 13-270 | 
| Cow position: | chr6:60057695-60057965 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 6 | 
| Conread position: | 13-282 | 
| Cow position: | chr6:40264241-40264511 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 150, 65 | 
| Conread position: | 13-284 | 
| Cow position: | chr6:50445801-50446073 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 54 | 
| Conread position: | 13-312 | 
| Cow position: | chr6:12629984-12629673 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 54 | 
| Conread position: | 13-316 | 
| Cow position: | chr6:10649065-10649364 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 146, 62 | 
| Conread position: | 13-317 | 
| Cow position: | chr6:20452067-20451760 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 65, 170 | 
| Conread position: | 13-318 | 
| Cow position: | chr6:1886705-1886995 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 10 | 
| Conread position: | 13-318 | 
| Cow position: | chr6:6343387-6343080 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 217 | 
| Conread position: | 13-318 | 
| Cow position: | chr6:41823862-41824176 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 25 | 
| Conread position: | 13-319 | 
| Cow position: | chr6:47339394-47339705 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 150, 31 | 
| Conread position: | 13-320 | 
| Cow position: | chr6:6642641-6642935 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 0 | 
| Conread position: | 13-320 | 
| Cow position: | chr6:14958386-14958692 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 33 | 
| Conread position: | 13-320 | 
| Cow position: | chr6:18447551-18447863 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 33 | 
| Conread position: | 13-320 | 
| Cow position: | chr6:38771245-38770955 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 179, 33 | 
| Conread position: | 13-320 | 
| Cow position: | chr6:46205974-46205668 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 63 | 
| Conread position: | 13-320 | 
| Cow position: | chr6:46667071-46666757 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 123 | 
| Conread position: | 13-321 | 
| Cow position: | chr6:10106032-10106351 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 33 | 
| Conread position: | 14-122 | 
| Cow position: | chr6:57088741-57088846 (view UCSC Genome Browser custom track) | 
| Alignm length: | 111 | 
| Alignm identity: | 94 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 63, 80 | 
| Conread position: | 14-126 | 
| Cow position: | chr6:67323275-67323161 (view UCSC Genome Browser custom track) | 
| Alignm length: | 115 | 
| Alignm identity: | 92 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 14-129 | 
| Cow position: | chr6:4559346-4559462 (view UCSC Genome Browser custom track) | 
| Alignm length: | 117 | 
| Alignm identity: | 91 | 
| Alignm E-value: | 8e-21 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 14-131 | 
| Cow position: | chr6:55763813-55763694 (view UCSC Genome Browser custom track) | 
| Alignm length: | 120 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 29, 0 | 
| Conread position: | 14-143 | 
| Cow position: | chr6:47355782-47355652 (view UCSC Genome Browser custom track) | 
| Alignm length: | 132 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 64, 30 | 
| Conread position: | 14-156 | 
| Cow position: | chr6:36011648-36011509 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 38, 60 | 
| Conread position: | 14-166 | 
| Cow position: | chr6:53138963-53139124 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 8e-31 | 
| Alignm gaps (pig, cow): | 29, 0 | 
| Conread position: | 14-168 | 
| Cow position: | chr6:22502951-22503120 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 29, 0 | 
| Conread position: | 14-190 | 
| Cow position: | chr6:7694390-7694573 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 2.99878e-43 | 
| Alignm gaps (pig, cow): | 32, 119 | 
| Conread position: | 14-193 | 
| Cow position: | chr6:56041665-56041845 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 9, 33 | 
| Conread position: | 14-195 | 
| Cow position: | chr6:34475593-34475768 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 86, 115 | 
| Conread position: | 14-207 | 
| Cow position: | chr6:32335760-32335580 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 35, 66 | 
| Conread position: | 14-207 | 
| Cow position: | chr6:61978216-61978418 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 33, 46 | 
| Conread position: | 14-212 | 
| Cow position: | chr6:6063332-6063519 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 148, 55 | 
| Conread position: | 14-221 | 
| Cow position: | chr6:40713542-40713750 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 4.2039e-45 | 
| Alignm gaps (pig, cow): | 86, 62 | 
| Conread position: | 14-230 | 
| Cow position: | chr6:67950911-67950701 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 149, 32 | 
| Conread position: | 14-291 | 
| Cow position: | chr6:5445584-5445327 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 64, 129 | 
| Conread position: | 14-291 | 
| Cow position: | chr6:35990275-35990549 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 202, 32 | 
| Conread position: | 14-320 | 
| Cow position: | chr6:16706961-16706660 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 149, 61 | 
| Conread position: | 14-320 | 
| Cow position: | chr6:53345755-53345446 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 14-321 | 
| Cow position: | chr6:20230870-20231171 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 61 | 
| Conread position: | 15-127 | 
| Cow position: | chr6:52705759-52705873 (view UCSC Genome Browser custom track) | 
| Alignm length: | 115 | 
| Alignm identity: | 96 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 15-142 | 
| Cow position: | chr6:33450985-33451103 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 15-146 | 
| Cow position: | chr6:8125288-8125157 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 32, 79 | 
| Conread position: | 15-157 | 
| Cow position: | chr6:65259520-65259653 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 8e-21 | 
| Alignm gaps (pig, cow): | 29, 0 | 
| Conread position: | 15-165 | 
| Cow position: | chr6:10399943-10400089 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 15-184 | 
| Cow position: | chr6:528317-528488 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 62, 29 | 
| Conread position: | 15-184 | 
| Cow position: | chr6:65702440-65702615 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 33, 94 | 
| Conread position: | 15-186 | 
| Cow position: | chr6:242767-242598 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 31, 61 | 
| Conread position: | 15-195 | 
| Cow position: | chr6:21542277-21542095 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 5e-37 | 
| Alignm gaps (pig, cow): | 60, 31 | 
| Conread position: | 15-232 | 
| Cow position: | chr6:54294065-54293849 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 150, 63 | 
| Conread position: | 15-262 | 
| Cow position: | chr6:34196193-34196440 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 31 | 
| Conread position: | 15-282 | 
| Cow position: | chr6:19681565-19681828 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 43 | 
| Conread position: | 15-282 | 
| Cow position: | chr6:48567384-48567654 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 66 | 
| Conread position: | 15-319 | 
| Cow position: | chr6:55607855-55608155 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 148, 56 | 
| Conread position: | 15-320 | 
| Cow position: | chr6:607224-606912 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 15-320 | 
| Cow position: | chr6:5958063-5958365 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 22 | 
| Conread position: | 16-163 | 
| Cow position: | chr6:8187557-8187711 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 16-165 | 
| Cow position: | chr6:31928221-31928081 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 16-251 | 
| Cow position: | chr6:21535012-21534778 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 147, 62 | 
| Conread position: | 16-320 | 
| Cow position: | chr6:9732887-9733181 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 59 | 
| Conread position: | 17-163 | 
| Cow position: | chr6:37603478-37603331 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 59, 28 | 
| Conread position: | 17-318 | 
| Cow position: | chr6:12845267-12844962 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 26, 88 | 
| Conread position: | 17-318 | 
| Cow position: | chr6:13367246-13366950 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 59, 29 | 
| Conread position: | 18-320 | 
| Cow position: | chr6:34075981-34075676 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 96 | 
| Conread position: | 19-165 | 
| Cow position: | chr6:21812684-21812536 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 19-257 | 
| Cow position: | chr6:6201394-6201161 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 29, 60 | 
| Conread position: | 20-320 | 
| Cow position: | chr6:40774400-40774720 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 145, 26 | 
| Conread position: | 22-210 | 
| Cow position: | chr6:3622068-3621873 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 9e-22 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 22-244 | 
| Cow position: | chr6:57149001-57149229 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 51, 135 | 
| Conread position: | 22-320 | 
| Cow position: | chr6:6769226-6768927 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 87, 56 | 
| Conread position: | 28-234 | 
| Cow position: | chr6:65903672-65903880 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 48, 174 | 
| Conread position: | 28-234 | 
| Cow position: | chr6:65904323-65904531 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 48, 174 | 
| Conread position: | 34-318 | 
| Cow position: | chr6:16625884-16625600 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 43, 10 | 
Show alignments to all cow chromosomes.
