Cow genome map

Conread name: rthg35_b22.y1

Conread position: 1-209
Cow position: chr6:51398773-51398562 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 167
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 10, 23

Conread position: 4-176
Cow position: chr6:54864702-54864872 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 140
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 74, 0

Conread position: 5-275
Cow position: chr6:47039112-47039378 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 66, 12

Conread position: 5-287
Cow position: chr6:15137053-15137337 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 204
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 64, 12

Conread position: 5-307
Cow position: chr6:17111047-17111354 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 214
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 58, 8

Conread position: 5-307
Cow position: chr6:17122505-17122201 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 213
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 92, 8

Conread position: 5-317
Cow position: chr6:8206307-8205990 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 222
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 66, 8

Conread position: 5-317
Cow position: chr6:60877416-60877098 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 226
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 73, 11

Conread position: 5-319
Cow position: chr6:52431061-52431381 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 6

Conread position: 5-320
Cow position: chr6:1264571-1264259 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 217
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 62, 11

Conread position: 5-320
Cow position: chr6:3271376-3271681 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 222
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 146, 8

Conread position: 5-320
Cow position: chr6:28111721-28112038 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 219
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 73, 8

Conread position: 5-320
Cow position: chr6:48872242-48872556 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 218
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 73, 8

Conread position: 5-320
Cow position: chr6:55538156-55538473 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 11

Conread position: 5-323
Cow position: chr6:40814484-40814158 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 8

Conread position: 5-334
Cow position: chr6:26413346-26413022 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 11

Conread position: 6-165
Cow position: chr6:54701509-54701346 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 67, 7

Conread position: 8-147
Cow position: chr6:59104567-59104432 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 45, 54

Conread position: 8-197
Cow position: chr6:14949514-14949708 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 153
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 95, 0

Conread position: 8-243
Cow position: chr6:47150755-47150506 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 188
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 35, 0

Conread position: 9-176
Cow position: chr6:6098320-6098488 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 141
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 15, 38

Conread position: 9-179
Cow position: chr6:53519660-53519829 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 141
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 70, 61

Conread position: 9-294
Cow position: chr6:5673200-5672906 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 243

Conread position: 10-101
Cow position: chr6:60667382-60667291 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 81
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 42, 69

Conread position: 10-108
Cow position: chr6:48988402-48988300 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 10-112
Cow position: chr6:19996581-19996479 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 91
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 88, 68

Conread position: 10-116
Cow position: chr6:16316270-16316166 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 96
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 66

Conread position: 10-117
Cow position: chr6:29266166-29266059 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 69

Conread position: 10-120
Cow position: chr6:22254022-22254136 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 10-123
Cow position: chr6:4692017-4692136 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 10-127
Cow position: chr6:27888312-27888192 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 35, 13

Conread position: 10-130
Cow position: chr6:60739978-60739856 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 104
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 66, 0

Conread position: 10-133
Cow position: chr6:12542971-12543095 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 68, 36

Conread position: 10-134
Cow position: chr6:50984188-50984060 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 108
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 94, 68

Conread position: 10-135
Cow position: chr6:44984292-44984162 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 109
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 65, 80

Conread position: 10-136
Cow position: chr6:40834507-40834638 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 66, 34

Conread position: 10-138
Cow position: chr6:16764690-16764809 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 10-138
Cow position: chr6:53453733-53453601 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 10-140
Cow position: chr6:19013029-19012900 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 66

Conread position: 10-141
Cow position: chr6:15447241-15447378 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 60, 35

Conread position: 10-142
Cow position: chr6:54288036-54287909 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 69

Conread position: 10-144
Cow position: chr6:12669067-12668934 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 42, 73

Conread position: 10-144
Cow position: chr6:65264576-65264708 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 10-145
Cow position: chr6:60819478-60819341 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 66, 0

Conread position: 10-146
Cow position: chr6:9839132-9838987 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 10-147
Cow position: chr6:11246725-11246589 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 36

Conread position: 10-155
Cow position: chr6:1703780-1703630 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 68, 34

Conread position: 10-157
Cow position: chr6:47799254-47799112 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 67, 82

Conread position: 10-161
Cow position: chr6:8788075-8788227 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 90, 63

Conread position: 10-164
Cow position: chr6:416061-415899 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 131
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 66, 0

Conread position: 10-164
Cow position: chr6:28318366-28318216 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 10-165
Cow position: chr6:12092031-12092178 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 10-165
Cow position: chr6:16191636-16191473 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 37, 109

Conread position: 10-165
Cow position: chr6:16423662-16423505 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 128
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 84, 36

Conread position: 10-165
Cow position: chr6:33277005-33276845 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 129
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 39, 97

Conread position: 10-165
Cow position: chr6:37199568-37199739 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 10-165
Cow position: chr6:48187617-48187775 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 39, 70

Conread position: 10-165
Cow position: chr6:52412823-52412660 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 130
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 39, 0

Conread position: 10-165
Cow position: chr6:53731484-53731327 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 130
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 66, 0

Conread position: 10-166
Cow position: chr6:14850752-14850909 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 131
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 36, 0

Conread position: 10-169
Cow position: chr6:46400449-46400604 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 145, 65

Conread position: 10-170
Cow position: chr6:58732344-58732513 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 10-171
Cow position: chr6:46245355-46245524 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 39, 0

Conread position: 10-171
Cow position: chr6:59069662-59069829 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 135
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 68, 36

Conread position: 10-172
Cow position: chr6:52025690-52025857 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 140
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 41, 0

Conread position: 10-173
Cow position: chr6:48425359-48425524 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 36, 87

Conread position: 10-173
Cow position: chr6:66131268-66131105 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 134
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 43, 70

Conread position: 10-175
Cow position: chr6:15782559-15782730 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 10-175
Cow position: chr6:20157293-20157120 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 38, 49

Conread position: 10-176
Cow position: chr6:2896718-2896545 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 141
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 38, 113

Conread position: 10-176
Cow position: chr6:7989447-7989619 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 39, 141

Conread position: 10-176
Cow position: chr6:38641456-38641292 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 140
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 153, 33

Conread position: 10-176
Cow position: chr6:47989147-47988984 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 66, 36

Conread position: 10-182
Cow position: chr6:57405161-57405336 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 57, 36

Conread position: 10-185
Cow position: chr6:17997352-17997530 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 145
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 66, 0

Conread position: 10-186
Cow position: chr6:21110927-21110753 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 146
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 153, 61

Conread position: 10-187
Cow position: chr6:18968818-18968991 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 66, 36

Conread position: 10-189
Cow position: chr6:38614778-38614605 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 145
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 153, 34

Conread position: 10-191
Cow position: chr6:7190157-7190340 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 64, 55

Conread position: 10-191
Cow position: chr6:29239902-29239722 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 146
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 68, 86

Conread position: 10-191
Cow position: chr6:38207529-38207716 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 153
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 66, 35

Conread position: 10-191
Cow position: chr6:59301858-59302047 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 157
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 66, 0

Conread position: 10-193
Cow position: chr6:15300856-15301040 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 150
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 64, 82

Conread position: 10-193
Cow position: chr6:38441138-38440959 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 146
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 68, 45

Conread position: 10-193
Cow position: chr6:50090608-50090417 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 10-194
Cow position: chr6:389132-388947 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 147
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 66, 36

Conread position: 10-194
Cow position: chr6:45160332-45160515 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 33, 0

Conread position: 10-195
Cow position: chr6:20605898-20605709 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 151
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 66, 36

Conread position: 10-195
Cow position: chr6:37149150-37148974 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 155
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 64, 0

Conread position: 10-195
Cow position: chr6:60239426-60239613 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 66, 161

Conread position: 10-195
Cow position: chr6:66874312-66874137 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 153, 36

Conread position: 10-197
Cow position: chr6:5462090-5462275 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 154
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 35, 93

Conread position: 10-198
Cow position: chr6:16746305-16746112 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 150
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 33, 98

Conread position: 10-198
Cow position: chr6:44194580-44194773 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 158
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 61, 36

Conread position: 10-199
Cow position: chr6:54884948-54885142 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 158
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 39, 0

Conread position: 10-200
Cow position: chr6:49002771-49002954 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 152
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 64, 0

Conread position: 10-204
Cow position: chr6:130199-130398 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 36

Conread position: 10-204
Cow position: chr6:54430788-54430584 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 10-211
Cow position: chr6:9736682-9736880 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 160
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 83, 47

Conread position: 10-211
Cow position: chr6:61113719-61113509 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 167
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 38, 0

Conread position: 10-220
Cow position: chr6:27110556-27110343 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 67, 159

Conread position: 10-220
Cow position: chr6:53711077-53710866 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 169
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 66, 42

Conread position: 10-229
Cow position: chr6:64449354-64449133 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 177
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 39, 120

Conread position: 10-234
Cow position: chr6:16103232-16103466 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 43, 102

Conread position: 10-238
Cow position: chr6:60350333-60350567 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 177
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 66, 36

Conread position: 10-239
Cow position: chr6:5114083-5114318 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 66, 33

Conread position: 10-239
Cow position: chr6:35471557-35471795 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 185
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 66, 36

Conread position: 10-242
Cow position: chr6:7103267-7103503 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 184
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 39, 178

Conread position: 10-242
Cow position: chr6:48281961-48281723 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 10-243
Cow position: chr6:52562205-52562441 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 61, 191

Conread position: 10-243
Cow position: chr6:54365368-54365596 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 68

Conread position: 10-245
Cow position: chr6:42961398-42961642 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 187
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 40, 0

Conread position: 10-245
Cow position: chr6:50746949-50746702 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 128

Conread position: 10-250
Cow position: chr6:57118975-57119207 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 180
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 18, 63

Conread position: 10-252
Cow position: chr6:61515229-61515481 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 191
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 35, 0

Conread position: 10-253
Cow position: chr6:6264605-6264363 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 190
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 90, 36

Conread position: 10-256
Cow position: chr6:38218633-38218378 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 36

Conread position: 10-256
Cow position: chr6:57164389-57164141 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 101

Conread position: 10-257
Cow position: chr6:28559386-28559132 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 215

Conread position: 10-257
Cow position: chr6:54368936-54369183 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 181

Conread position: 10-257
Cow position: chr6:62479201-62479452 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 188
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 20, 69

Conread position: 10-268
Cow position: chr6:15937889-15938162 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 204
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 84, 36

Conread position: 10-269
Cow position: chr6:19508478-19508730 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 196
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 187, 36

Conread position: 10-273
Cow position: chr6:31526005-31525749 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 34

Conread position: 10-280
Cow position: chr6:21587454-21587731 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 10-281
Cow position: chr6:46558016-46557747 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 203
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 36, 66

Conread position: 10-284
Cow position: chr6:12500824-12500543 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 65

Conread position: 10-287
Cow position: chr6:16700227-16699945 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 208

Conread position: 10-287
Cow position: chr6:60859337-60859620 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 200

Conread position: 10-288
Cow position: chr6:32121873-32121593 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 36

Conread position: 10-292
Cow position: chr6:27851743-27852026 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 67

Conread position: 10-297
Cow position: chr6:51835360-51835076 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 75

Conread position: 10-297
Cow position: chr6:54140772-54140492 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 69

Conread position: 10-302
Cow position: chr6:10176334-10176630 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 73

Conread position: 10-304
Cow position: chr6:2607577-2607280 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 36

Conread position: 10-304
Cow position: chr6:10332128-10332440 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 56

Conread position: 10-304
Cow position: chr6:35842617-35842327 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 86

Conread position: 10-304
Cow position: chr6:62925035-62925327 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 36

Conread position: 10-304
Cow position: chr6:67187646-67187363 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 10-305
Cow position: chr6:28482982-28482679 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 10-306
Cow position: chr6:445283-444991 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 179

Conread position: 10-310
Cow position: chr6:54867476-54867179 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 68

Conread position: 10-311
Cow position: chr6:51674875-51674569 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 65

Conread position: 10-311
Cow position: chr6:58076192-58075887 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 198

Conread position: 10-316
Cow position: chr6:32210666-32210972 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 36

Conread position: 10-317
Cow position: chr6:28477140-28476830 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 36

Conread position: 10-317
Cow position: chr6:39093698-39093415 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 224
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 270, 36

Conread position: 10-317
Cow position: chr6:49398652-49398964 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 36

Conread position: 10-318
Cow position: chr6:4864586-4864886 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 10-318
Cow position: chr6:9751083-9751393 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 34

Conread position: 10-318
Cow position: chr6:24781594-24781912 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 10-318
Cow position: chr6:36928617-36928305 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 36

Conread position: 10-318
Cow position: chr6:42565651-42565338 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 138

Conread position: 10-318
Cow position: chr6:47305302-47304980 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 182

Conread position: 10-318
Cow position: chr6:48169908-48169597 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 87

Conread position: 10-318
Cow position: chr6:63047541-63047229 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 69

Conread position: 10-319
Cow position: chr6:30826070-30826401 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 234
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 66, 36

Conread position: 10-319
Cow position: chr6:56849974-56849653 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 36

Conread position: 10-320
Cow position: chr6:1770236-1770544 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 20

Conread position: 10-320
Cow position: chr6:1783815-1784115 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 65

Conread position: 10-320
Cow position: chr6:3978700-3979011 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 70

Conread position: 10-320
Cow position: chr6:5095585-5095900 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 81

Conread position: 10-320
Cow position: chr6:6067729-6068038 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 53

Conread position: 10-320
Cow position: chr6:6614400-6614085 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 36

Conread position: 10-320
Cow position: chr6:8562682-8562366 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 36

Conread position: 10-320
Cow position: chr6:8804568-8804893 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 36

Conread position: 10-320
Cow position: chr6:9008649-9008950 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 34

Conread position: 10-320
Cow position: chr6:12928081-12927773 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 209

Conread position: 10-320
Cow position: chr6:14839062-14839376 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 145

Conread position: 10-320
Cow position: chr6:16411153-16410848 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 10-320
Cow position: chr6:17557344-17557025 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 10-320
Cow position: chr6:18080545-18080866 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 10-320
Cow position: chr6:18988175-18987870 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 10-320
Cow position: chr6:21004636-21004306 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 189

Conread position: 10-320
Cow position: chr6:21311786-21312105 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 202

Conread position: 10-320
Cow position: chr6:32126026-32125717 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 30

Conread position: 10-320
Cow position: chr6:33302373-33302061 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 70

Conread position: 10-320
Cow position: chr6:35103371-35103674 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 10-320
Cow position: chr6:36470604-36470919 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 69

Conread position: 10-320
Cow position: chr6:40032155-40031843 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 36

Conread position: 10-320
Cow position: chr6:44099049-44098738 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 186

Conread position: 10-320
Cow position: chr6:46634219-46633913 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 226
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 52, 68

Conread position: 10-320
Cow position: chr6:47540493-47540175 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 10-320
Cow position: chr6:52248169-52248472 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 236
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 67, 36

Conread position: 10-320
Cow position: chr6:53178601-53178289 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 155

Conread position: 10-320
Cow position: chr6:61631646-61631963 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 203

Conread position: 10-320
Cow position: chr6:65862650-65862336 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 18

Conread position: 10-320
Cow position: chr6:67214707-67214392 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 105

Conread position: 10-323
Cow position: chr6:42518938-42518617 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 10-323
Cow position: chr6:55040249-55040570 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 10-325
Cow position: chr6:54647559-54647880 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 96

Conread position: 11-184
Cow position: chr6:59620632-59620455 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 143
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 37, 13

Conread position: 11-291
Cow position: chr6:9375405-9375692 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 233

Conread position: 11-318
Cow position: chr6:48946409-48946713 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 215
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 66, 50

Conread position: 11-319
Cow position: chr6:31635729-31636036 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 33

Conread position: 13-112
Cow position: chr6:50509638-50509537 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 90
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 13-116
Cow position: chr6:19351195-19351299 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 63, 33

Conread position: 13-126
Cow position: chr6:31847261-31847375 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 63, 42

Conread position: 13-155
Cow position: chr6:25008669-25008530 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 63, 33

Conread position: 13-182
Cow position: chr6:24515234-24515405 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 63, 30

Conread position: 13-186
Cow position: chr6:60442378-60442203 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 57

Conread position: 13-190
Cow position: chr6:37783379-37783190 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 13-191
Cow position: chr6:49685543-49685364 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 62, 40

Conread position: 13-198
Cow position: chr6:68049396-68049208 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 154
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 40, 0

Conread position: 13-207
Cow position: chr6:62966922-62967124 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 32, 90

Conread position: 13-225
Cow position: chr6:3952477-3952270 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 13-226
Cow position: chr6:2423703-2423493 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 28, 68

Conread position: 13-270
Cow position: chr6:60057695-60057965 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 6

Conread position: 13-282
Cow position: chr6:40264241-40264511 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 65

Conread position: 13-284
Cow position: chr6:50445801-50446073 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 54

Conread position: 13-312
Cow position: chr6:12629984-12629673 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 54

Conread position: 13-316
Cow position: chr6:10649065-10649364 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 62

Conread position: 13-317
Cow position: chr6:20452067-20451760 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 222
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 65, 170

Conread position: 13-318
Cow position: chr6:1886705-1886995 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 10

Conread position: 13-318
Cow position: chr6:6343387-6343080 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 217

Conread position: 13-318
Cow position: chr6:41823862-41824176 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 13-319
Cow position: chr6:47339394-47339705 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 31

Conread position: 13-320
Cow position: chr6:6642641-6642935 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 13-320
Cow position: chr6:14958386-14958692 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 33

Conread position: 13-320
Cow position: chr6:18447551-18447863 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 33

Conread position: 13-320
Cow position: chr6:38771245-38770955 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 222
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 179, 33

Conread position: 13-320
Cow position: chr6:46205974-46205668 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 63

Conread position: 13-320
Cow position: chr6:46667071-46666757 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 123

Conread position: 13-321
Cow position: chr6:10106032-10106351 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 33

Conread position: 14-122
Cow position: chr6:57088741-57088846 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 80

Conread position: 14-126
Cow position: chr6:67323275-67323161 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 14-129
Cow position: chr6:4559346-4559462 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 100, 0

Conread position: 14-131
Cow position: chr6:55763813-55763694 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 102
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 14-143
Cow position: chr6:47355782-47355652 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 64, 30

Conread position: 14-156
Cow position: chr6:36011648-36011509 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 38, 60

Conread position: 14-166
Cow position: chr6:53138963-53139124 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 129
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 14-168
Cow position: chr6:22502951-22503120 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 14-190
Cow position: chr6:7694390-7694573 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 154
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 32, 119

Conread position: 14-193
Cow position: chr6:56041665-56041845 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 140
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 9, 33

Conread position: 14-195
Cow position: chr6:34475593-34475768 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 86, 115

Conread position: 14-207
Cow position: chr6:32335760-32335580 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 35, 66

Conread position: 14-207
Cow position: chr6:61978216-61978418 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 33, 46

Conread position: 14-212
Cow position: chr6:6063332-6063519 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 148, 55

Conread position: 14-221
Cow position: chr6:40713542-40713750 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 168
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 86, 62

Conread position: 14-230
Cow position: chr6:67950911-67950701 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 149, 32

Conread position: 14-291
Cow position: chr6:5445584-5445327 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 64, 129

Conread position: 14-291
Cow position: chr6:35990275-35990549 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 32

Conread position: 14-320
Cow position: chr6:16706961-16706660 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 61

Conread position: 14-320
Cow position: chr6:53345755-53345446 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 14-321
Cow position: chr6:20230870-20231171 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 61

Conread position: 15-127
Cow position: chr6:52705759-52705873 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 15-142
Cow position: chr6:33450985-33451103 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 15-146
Cow position: chr6:8125288-8125157 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 79

Conread position: 15-157
Cow position: chr6:65259520-65259653 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 15-165
Cow position: chr6:10399943-10400089 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 15-184
Cow position: chr6:528317-528488 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 62, 29

Conread position: 15-184
Cow position: chr6:65702440-65702615 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 33, 94

Conread position: 15-186
Cow position: chr6:242767-242598 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 140
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 31, 61

Conread position: 15-195
Cow position: chr6:21542277-21542095 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 60, 31

Conread position: 15-232
Cow position: chr6:54294065-54293849 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 169
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 150, 63

Conread position: 15-262
Cow position: chr6:34196193-34196440 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 31

Conread position: 15-282
Cow position: chr6:19681565-19681828 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 43

Conread position: 15-282
Cow position: chr6:48567384-48567654 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 66

Conread position: 15-319
Cow position: chr6:55607855-55608155 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 56

Conread position: 15-320
Cow position: chr6:607224-606912 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 15-320
Cow position: chr6:5958063-5958365 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 22

Conread position: 16-163
Cow position: chr6:8187557-8187711 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 16-165
Cow position: chr6:31928221-31928081 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 121
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 16-251
Cow position: chr6:21535012-21534778 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 62

Conread position: 16-320
Cow position: chr6:9732887-9733181 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 59

Conread position: 17-163
Cow position: chr6:37603478-37603331 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 122
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 59, 28

Conread position: 17-318
Cow position: chr6:12845267-12844962 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 88

Conread position: 17-318
Cow position: chr6:13367246-13366950 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 223
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 59, 29

Conread position: 18-320
Cow position: chr6:34075981-34075676 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 96

Conread position: 19-165
Cow position: chr6:21812684-21812536 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 121
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 58, 0

Conread position: 19-257
Cow position: chr6:6201394-6201161 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 182
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 29, 60

Conread position: 20-320
Cow position: chr6:40774400-40774720 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 230
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 145, 26

Conread position: 22-210
Cow position: chr6:3622068-3621873 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 22-244
Cow position: chr6:57149001-57149229 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 51, 135

Conread position: 22-320
Cow position: chr6:6769226-6768927 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 56

Conread position: 28-234
Cow position: chr6:65903672-65903880 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 48, 174

Conread position: 28-234
Cow position: chr6:65904323-65904531 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 48, 174

Conread position: 34-318
Cow position: chr6:16625884-16625600 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 43, 10

Show alignments to all cow chromosomes.