Cow genome map
| Conread name: | rton1219b_i23.y1 |
| Conread position: | 1-112 |
| Cow position: | chr11:16315082-16314971 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 34, 54 |
| Conread position: | 1-140 |
| Cow position: | chr11:58938508-58938646 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 54 |
| Conread position: | 1-144 |
| Cow position: | chr11:65676334-65676476 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-145 |
| Cow position: | chr11:41451767-41451915 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 27, 57 |
| Conread position: | 2-143 |
| Cow position: | chr11:62729133-62728994 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 2-144 |
| Cow position: | chr11:39803310-39803449 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 95, 45 |
| Conread position: | 3-132 |
| Cow position: | chr11:37545995-37546122 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 33, 57 |
| Conread position: | 3-145 |
| Cow position: | chr11:29983402-29983543 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 4-142 |
| Cow position: | chr11:480681-480541 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 39, 53 |
| Conread position: | 5-144 |
| Cow position: | chr11:16796709-16796568 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 104, 47 |
| Conread position: | 5-145 |
| Cow position: | chr11:79018806-79018953 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 6-112 |
| Cow position: | chr11:25968650-25968756 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 25, 49 |
| Conread position: | 7-136 |
| Cow position: | chr11:65842628-65842758 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 25, 49 |
| Conread position: | 8-121 |
| Cow position: | chr11:23063838-23063950 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 28, 46 |
| Conread position: | 8-144 |
| Cow position: | chr11:64952055-64951922 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 10-141 |
| Cow position: | chr11:44037093-44036967 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 12-198 |
| Cow position: | chr11:53130958-53130779 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 13-113 |
| Cow position: | chr11:47784976-47784876 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 23, 40 |
| Conread position: | 18-143 |
| Cow position: | chr11:34623404-34623280 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 18-144 |
| Cow position: | chr11:6156048-6156175 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 54, 34 |
| Conread position: | 18-144 |
| Cow position: | chr11:14466266-14466392 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 83, 36 |
| Conread position: | 18-144 |
| Cow position: | chr11:36849147-36849022 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 18-145 |
| Cow position: | chr11:69294949-69295078 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 18, 37 |
| Conread position: | 18-145 |
| Cow position: | chr11:77470273-77470399 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 18-174 |
| Cow position: | chr11:36128681-36128525 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 20, 37 |
| Conread position: | 19-126 |
| Cow position: | chr11:63640667-63640774 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 19, 36 |
| Conread position: | 19-135 |
| Cow position: | chr11:3234330-3234215 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 19, 36 |
| Conread position: | 20-136 |
| Cow position: | chr11:26845380-26845496 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 16, 35 |
| Conread position: | 23-134 |
| Cow position: | chr11:37982362-37982473 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 13, 32 |
| Conread position: | 24-128 |
| Cow position: | chr11:8419745-8419849 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 91 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 12, 32 |
| Conread position: | 25-141 |
| Cow position: | chr11:48932405-48932520 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 11, 30 |
| Conread position: | 25-142 |
| Cow position: | chr11:21816850-21816968 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 11, 31 |
| Conread position: | 26-126 |
| Cow position: | chr11:27932485-27932385 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 10, 29 |
| Conread position: | 26-145 |
| Cow position: | chr11:17991409-17991289 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 12, 29 |
| Conread position: | 37-151 |
| Cow position: | chr11:77468246-77468361 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 102, 17 |
Show alignments to all cow chromosomes.