Cow genome map
| Conread name: | rton1219b_i23.y1 |
| Conread position: | 1-108 |
| Cow position: | chr16:2223169-2223276 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 36, 54 |
| Conread position: | 1-143 |
| Cow position: | chr16:35297377-35297236 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 91, 53 |
| Conread position: | 1-144 |
| Cow position: | chr16:52705820-52705962 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 31, 55 |
| Conread position: | 3-104 |
| Cow position: | chr16:18572831-18572933 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 29, 52 |
| Conread position: | 3-145 |
| Cow position: | chr16:33523135-33523275 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 3-146 |
| Cow position: | chr16:16945034-16945176 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 5-128 |
| Cow position: | chr16:13164363-13164485 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 5-136 |
| Cow position: | chr16:10757211-10757082 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 5-140 |
| Cow position: | chr16:54084305-54084171 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 7-132 |
| Cow position: | chr16:11922783-11922911 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 19, 50 |
| Conread position: | 8-139 |
| Cow position: | chr16:6310447-6310579 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 17, 48 |
| Conread position: | 10-134 |
| Cow position: | chr16:55002435-55002314 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 12-131 |
| Cow position: | chr16:20025739-20025621 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 24, 44 |
| Conread position: | 13-124 |
| Cow position: | chr16:12091440-12091550 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 18-130 |
| Cow position: | chr16:48340185-48340297 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 18, 37 |
| Conread position: | 18-143 |
| Cow position: | chr16:7550219-7550094 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 18, 35 |
| Conread position: | 20-145 |
| Cow position: | chr16:48099706-48099578 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 15, 50 |
| Conread position: | 21-131 |
| Cow position: | chr16:13726075-13725966 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 21-133 |
| Cow position: | chr16:13972936-13973048 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 34 |
| Conread position: | 22-141 |
| Cow position: | chr16:53614328-53614210 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 23-145 |
| Cow position: | chr16:39238502-39238379 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 90, 31 |
| Conread position: | 24-128 |
| Cow position: | chr16:20749413-20749309 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 12, 31 |
| Conread position: | 26-124 |
| Cow position: | chr16:13611239-13611336 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 26-137 |
| Cow position: | chr16:3114768-3114657 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 10, 29 |
| Conread position: | 26-145 |
| Cow position: | chr16:496136-496252 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 30-143 |
| Cow position: | chr16:13448982-13448871 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 96, 24 |
Show alignments to all cow chromosomes.