Cow genome map
| Conread name: | rton1219b_i23.y1 |
| Conread position: | 1-138 |
| Cow position: | chr27:17919017-17918877 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 35, 124 |
| Conread position: | 2-116 |
| Cow position: | chr27:1193572-1193456 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 30, 53 |
| Conread position: | 2-124 |
| Cow position: | chr27:22708729-22708852 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 24, 54 |
| Conread position: | 2-170 |
| Cow position: | chr27:30793852-30793677 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 23, 56 |
| Conread position: | 3-136 |
| Cow position: | chr27:19823046-19823177 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 3-141 |
| Cow position: | chr27:11466782-11466644 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 33, 52 |
| Conread position: | 3-145 |
| Cow position: | chr27:6014907-6015046 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 4-131 |
| Cow position: | chr27:27270832-27270706 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 4-143 |
| Cow position: | chr27:4155296-4155157 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 54 |
| Conread position: | 6-123 |
| Cow position: | chr27:16088529-16088644 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 7-122 |
| Cow position: | chr27:2685178-2685292 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 7-145 |
| Cow position: | chr27:6428696-6428834 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 24, 48 |
| Conread position: | 8-145 |
| Cow position: | chr27:20790225-20790090 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 44 |
| Conread position: | 9-143 |
| Cow position: | chr27:342365-342500 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 23, 47 |
| Conread position: | 11-132 |
| Cow position: | chr27:28290585-28290705 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 12-134 |
| Cow position: | chr27:29658995-29658874 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 18-134 |
| Cow position: | chr27:30988524-30988638 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 18-141 |
| Cow position: | chr27:23665039-23664918 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 20-119 |
| Cow position: | chr27:154177-154275 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 20-138 |
| Cow position: | chr27:30293171-30293053 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 19, 39 |
| Conread position: | 20-144 |
| Cow position: | chr27:7212979-7212856 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 35 |
| Conread position: | 21-141 |
| Cow position: | chr27:17927403-17927283 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 15, 34 |
| Conread position: | 21-144 |
| Cow position: | chr27:27673306-27673183 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 15, 34 |
| Conread position: | 22-142 |
| Cow position: | chr27:15214947-15215067 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 14, 33 |
| Conread position: | 23-145 |
| Cow position: | chr27:16345134-16345013 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 25-135 |
| Cow position: | chr27:2098630-2098521 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 37-145 |
| Cow position: | chr27:26907116-26907009 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 18, 0 |
Show alignments to all cow chromosomes.