Cow genome map
| Conread name: | rton1219b_i23.y1 |
| Conread position: | 1-140 |
| Cow position: | chr3:53508843-53508703 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 31, 55 |
| Conread position: | 1-147 |
| Cow position: | chr3:59147813-59147669 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 35, 55 |
| Conread position: | 2-132 |
| Cow position: | chr3:5346444-5346573 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 3-133 |
| Cow position: | chr3:36569841-36569969 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 4-136 |
| Cow position: | chr3:26973194-26973327 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 29, 52 |
| Conread position: | 4-144 |
| Cow position: | chr3:39909460-39909601 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 32, 53 |
| Conread position: | 5-144 |
| Cow position: | chr3:23443939-23444079 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 31, 51 |
| Conread position: | 5-144 |
| Cow position: | chr3:78201842-78201705 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 56, 45 |
| Conread position: | 7-188 |
| Cow position: | chr3:32458128-32457947 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 29, 44 |
| Conread position: | 8-138 |
| Cow position: | chr3:14625928-14626054 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 8-145 |
| Cow position: | chr3:35285285-35285148 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 100, 46 |
| Conread position: | 11-144 |
| Cow position: | chr3:1785033-1785165 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 26, 44 |
| Conread position: | 12-145 |
| Cow position: | chr3:75151198-75151330 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 14-144 |
| Cow position: | chr3:74044540-74044410 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 21, 41 |
| Conread position: | 17-133 |
| Cow position: | chr3:54435152-54435037 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 21, 39 |
| Conread position: | 18-128 |
| Cow position: | chr3:83215452-83215342 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 18, 36 |
| Conread position: | 19-121 |
| Cow position: | chr3:35299869-35299768 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 20-144 |
| Cow position: | chr3:49731314-49731439 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 72, 33 |
| Conread position: | 22-124 |
| Cow position: | chr3:623929-623827 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 87 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 14, 33 |
| Conread position: | 23-122 |
| Cow position: | chr3:50012879-50012780 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 36 |
| Conread position: | 24-131 |
| Cow position: | chr3:11368834-11368940 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 24-138 |
| Cow position: | chr3:44330231-44330345 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 14, 29 |
| Conread position: | 24-141 |
| Cow position: | chr3:48043797-48043914 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 12, 31 |
| Conread position: | 25-126 |
| Cow position: | chr3:28937408-28937508 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 86 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 25-143 |
| Cow position: | chr3:49232059-49231942 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 25-251 |
| Cow position: | chr3:64372919-64373145 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 18, 14 |
| Conread position: | 27-144 |
| Cow position: | chr3:62622981-62623098 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 27 |
| Conread position: | 27-145 |
| Cow position: | chr3:27670647-27670527 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 9, 28 |
| Conread position: | 37-140 |
| Cow position: | chr3:53256721-53256619 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
Show alignments to all cow chromosomes.