Cow genome map
| Conread name: | rton1219b_i23.y1 |
| Conread position: | 4-124 |
| Cow position: | chr4:47029911-47029792 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 4-132 |
| Cow position: | chr4:15462014-15462142 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 32, 51 |
| Conread position: | 5-143 |
| Cow position: | chr4:26671630-26671767 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 30, 53 |
| Conread position: | 7-120 |
| Cow position: | chr4:59871691-59871578 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 25, 49 |
| Conread position: | 8-145 |
| Cow position: | chr4:47349073-47348932 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 19, 49 |
| Conread position: | 13-144 |
| Cow position: | chr4:13211450-13211317 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 42 |
| Conread position: | 15-130 |
| Cow position: | chr4:45012952-45013066 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 17-139 |
| Cow position: | chr4:19456007-19456128 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 18-116 |
| Cow position: | chr4:46656333-46656235 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 84 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 17, 37 |
| Conread position: | 18-126 |
| Cow position: | chr4:19542349-19542241 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 20, 37 |
| Conread position: | 18-143 |
| Cow position: | chr4:43894611-43894735 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 99, 34 |
| Conread position: | 18-145 |
| Cow position: | chr4:69398634-69398760 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 69, 21 |
| Conread position: | 20-145 |
| Cow position: | chr4:32272724-32272852 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 16, 35 |
| Conread position: | 20-145 |
| Cow position: | chr4:45799132-45799007 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 94, 34 |
| Conread position: | 21-130 |
| Cow position: | chr4:44554399-44554291 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 15, 34 |
| Conread position: | 23-145 |
| Cow position: | chr4:19324214-19324092 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 13, 32 |
| Conread position: | 24-129 |
| Cow position: | chr4:21065218-21065114 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 12, 31 |
| Conread position: | 25-137 |
| Cow position: | chr4:45367960-45367849 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 11, 30 |
| Conread position: | 26-144 |
| Cow position: | chr4:65730542-65730659 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 87, 28 |
| Conread position: | 27-144 |
| Cow position: | chr4:52268106-52268224 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 85, 25 |
| Conread position: | 34-143 |
| Cow position: | chr4:27755030-27755138 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 37-251 |
| Cow position: | chr4:65649901-65650106 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 187, 15 |
| Conread position: | 39-248 |
| Cow position: | chr4:50675937-50676142 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 144, 15 |
Show alignments to all cow chromosomes.