Cow genome map
| Conread name: | rton1219b_i23.y1 |
| Conread position: | 1-136 |
| Cow position: | chr9:42986508-42986373 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 36, 54 |
| Conread position: | 1-142 |
| Cow position: | chr9:4268197-4268057 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-142 |
| Cow position: | chr9:53413474-53413333 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 34, 54 |
| Conread position: | 1-145 |
| Cow position: | chr9:36849434-36849579 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 35, 52 |
| Conread position: | 1-146 |
| Cow position: | chr9:61307074-61306930 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 2-135 |
| Cow position: | chr9:49225182-49225314 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 4-108 |
| Cow position: | chr9:61019556-61019453 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 6-153 |
| Cow position: | chr9:41701254-41701401 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 30, 49 |
| Conread position: | 7-118 |
| Cow position: | chr9:44526920-44527031 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 28, 48 |
| Conread position: | 11-248 |
| Cow position: | chr9:17310813-17310571 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 95, 23 |
| Conread position: | 12-144 |
| Cow position: | chr9:1733113-1733245 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 125, 42 |
| Conread position: | 14-172 |
| Cow position: | chr9:9421893-9421734 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 18, 42 |
| Conread position: | 18-139 |
| Cow position: | chr9:28686177-28686297 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 18-145 |
| Cow position: | chr9:34065771-34065640 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 18-145 |
| Cow position: | chr9:59386989-59386863 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 18, 37 |
| Conread position: | 18-148 |
| Cow position: | chr9:50540921-50540788 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 37 |
| Conread position: | 20-145 |
| Cow position: | chr9:1972717-1972844 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 16, 35 |
| Conread position: | 21-143 |
| Cow position: | chr9:7951858-7951736 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 15, 35 |
| Conread position: | 22-142 |
| Cow position: | chr9:39681128-39681247 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 23-144 |
| Cow position: | chr9:31638874-31638754 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 24-141 |
| Cow position: | chr9:36634966-36634850 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 24-144 |
| Cow position: | chr9:50074998-50075116 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 83, 30 |
| Conread position: | 24-145 |
| Cow position: | chr9:22696003-22696123 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 27-144 |
| Cow position: | chr9:8122280-8122396 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 28-153 |
| Cow position: | chr9:41716227-41716353 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 100, 27 |
| Conread position: | 36-132 |
| Cow position: | chr9:5407696-5407601 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 56-145 |
| Cow position: | chr9:31270312-31270401 (view UCSC Genome Browser custom track) |
| Alignm length: | 90 |
| Alignm identity: | 82 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.