Cow genome map

Conread name: rton1227b_p6.y1

Conread position: 103-284
Cow position: chr24:18614904-18615084 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 50, 43

Conread position: 105-283
Cow position: chr24:19623764-19623938 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 14, 29

Conread position: 106-281
Cow position: chr24:16118272-16118441 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 6, 40

Conread position: 109-284
Cow position: chr24:16268217-16268045 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 36, 42

Conread position: 113-284
Cow position: chr24:15861685-15861510 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 114-275
Cow position: chr24:24755359-24755522 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 42

Conread position: 114-277
Cow position: chr24:28045667-28045836 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 95, 41

Conread position: 114-278
Cow position: chr24:37395293-37395133 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 101, 26

Conread position: 114-280
Cow position: chr24:8886826-8886990 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 76, 26

Conread position: 114-280
Cow position: chr24:19769404-19769570 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 155, 43

Conread position: 114-280
Cow position: chr24:34496034-34496202 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 51, 41

Conread position: 114-281
Cow position: chr24:32054576-32054741 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 117
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 19, 0

Conread position: 114-281
Cow position: chr24:33944319-33944482 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 114-281
Cow position: chr24:39791455-39791622 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 26, 50

Conread position: 114-282
Cow position: chr24:17832897-17832739 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 114-283
Cow position: chr24:27418185-27418021 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 93

Conread position: 114-283
Cow position: chr24:43364275-43364441 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 105, 0

Conread position: 114-284
Cow position: chr24:2992962-2992798 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 114-284
Cow position: chr24:6102741-6102911 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 35, 101

Conread position: 114-284
Cow position: chr24:7777703-7777545 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 114-284
Cow position: chr24:15373323-15373489 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 26, 0

Conread position: 114-284
Cow position: chr24:16509887-16510061 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 67, 30

Conread position: 114-284
Cow position: chr24:16645407-16645235 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 114-284
Cow position: chr24:17955525-17955361 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 114-284
Cow position: chr24:24457333-24457167 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 31, 0

Conread position: 114-284
Cow position: chr24:27290785-27290955 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 34, 42

Conread position: 114-284
Cow position: chr24:28327170-28326997 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 94

Conread position: 114-284
Cow position: chr24:30484034-30483857 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 125
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 107, 0

Conread position: 114-284
Cow position: chr24:31816492-31816662 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 119
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 26, 42

Conread position: 114-284
Cow position: chr24:32194425-32194592 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 139

Conread position: 114-284
Cow position: chr24:32204878-32204711 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 40, 0

Conread position: 114-284
Cow position: chr24:34742668-34742837 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 77, 36

Conread position: 114-284
Cow position: chr24:35150438-35150602 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 115-284
Cow position: chr24:27844613-27844444 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 23, 46

Conread position: 115-284
Cow position: chr24:31159538-31159699 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 118-284
Cow position: chr24:18970587-18970424 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 80, 22

Conread position: 120-284
Cow position: chr24:27202012-27202172 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 120-284
Cow position: chr24:29673442-29673605 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 20

Conread position: 121-275
Cow position: chr24:11840112-11840262 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 121-281
Cow position: chr24:7046825-7046669 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 121-281
Cow position: chr24:31324205-31324365 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 132

Conread position: 121-284
Cow position: chr24:17104649-17104486 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 121-284
Cow position: chr24:26732375-26732533 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 121-284
Cow position: chr24:29606112-29605949 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 33, 19

Conread position: 121-284
Cow position: chr24:32124717-32124559 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 61

Conread position: 121-284
Cow position: chr24:34396251-34396095 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 22, 0

Conread position: 121-284
Cow position: chr24:39523524-39523365 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 19, 0

Conread position: 122-262
Cow position: chr24:15508616-15508482 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 17

Conread position: 122-282
Cow position: chr24:28690609-28690766 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 122-282
Cow position: chr24:32369994-32369833 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 62, 32

Conread position: 122-284
Cow position: chr24:29679385-29679229 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 123-280
Cow position: chr24:27726090-27725932 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 18, 30

Conread position: 125-271
Cow position: chr24:21894977-21895120 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 125-281
Cow position: chr24:3165743-3165899 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 112
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 29, 9

Conread position: 125-281
Cow position: chr24:25164960-25165115 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 24, 33

Conread position: 125-281
Cow position: chr24:28319285-28319128 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 125-284
Cow position: chr24:17752186-17752029 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 125-284
Cow position: chr24:27900655-27900811 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 125

Conread position: 126-284
Cow position: chr24:12452710-12452867 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 117

Conread position: 126-284
Cow position: chr24:19535326-19535172 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 126-284
Cow position: chr24:19736407-19736251 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 34, 18

Conread position: 126-284
Cow position: chr24:33723918-33723761 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 59

Conread position: 133-278
Cow position: chr24:16895503-16895358 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 139, 22

Conread position: 133-281
Cow position: chr24:11007393-11007537 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 13, 23

Conread position: 133-282
Cow position: chr24:34008640-34008491 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 134-282
Cow position: chr24:33098539-33098391 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 134-283
Cow position: chr24:34272745-34272893 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 34, 16

Conread position: 135-283
Cow position: chr24:2095948-2095799 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 10

Conread position: 137-283
Cow position: chr24:17434551-17434693 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 16, 12

Conread position: 138-281
Cow position: chr24:24662195-24662050 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 138-283
Cow position: chr24:18741635-18741489 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 9, 0

Conread position: 138-284
Cow position: chr24:22999953-23000098 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 51

Conread position: 140-283
Cow position: chr24:28289314-28289171 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 140

Conread position: 140-284
Cow position: chr24:20969722-20969580 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 140-284
Cow position: chr24:41405832-41405978 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 53, 10

Conread position: 141-280
Cow position: chr24:43832472-43832608 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 141-281
Cow position: chr24:39905513-39905366 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 92, 37

Conread position: 141-284
Cow position: chr24:28042916-28043059 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 143-284
Cow position: chr24:34896757-34896617 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 33

Conread position: 145-284
Cow position: chr24:29389176-29389318 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 95, 0

Conread position: 149-284
Cow position: chr24:26848780-26848649 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 150-283
Cow position: chr24:29170912-29171044 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 8, 76

Conread position: 151-283
Cow position: chr24:22647392-22647259 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 101
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 57, 79

Conread position: 151-284
Cow position: chr24:33465667-33465538 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 76, 0

Conread position: 152-270
Cow position: chr24:18355161-18355278 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 152-281
Cow position: chr24:34555988-34556115 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 101, 0

Conread position: 152-282
Cow position: chr24:32070915-32071043 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 152-284
Cow position: chr24:28470728-28470596 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 156-283
Cow position: chr24:15347545-15347672 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 96, 118

Conread position: 160-284
Cow position: chr24:41068220-41068344 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 110, 67

Conread position: 164-284
Cow position: chr24:32891080-32890960 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 178-284
Cow position: chr24:22235445-22235551 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 179-284
Cow position: chr24:32818325-32818219 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 6, 35

Conread position: 181-284
Cow position: chr24:28024260-28024363 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 186-284
Cow position: chr24:256012-256110 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 189-284
Cow position: chr24:39218563-39218468 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.