Cow genome map

Conread name: rton1227b_p6.y1

Conread position: 103-283
Cow position: chr28:21380813-21380992 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 168, 150

Conread position: 108-284
Cow position: chr28:7156771-7156950 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 17, 53

Conread position: 109-283
Cow position: chr28:6059531-6059358 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 14, 41

Conread position: 114-271
Cow position: chr28:4823552-4823704 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 114-274
Cow position: chr28:23676084-23676241 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 27, 0

Conread position: 114-278
Cow position: chr28:1538115-1538268 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 114-280
Cow position: chr28:4307958-4307788 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 114-280
Cow position: chr28:20759756-20759593 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 36, 0

Conread position: 114-280
Cow position: chr28:23007788-23007621 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 39, 31

Conread position: 114-281
Cow position: chr28:4841453-4841280 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 53, 32

Conread position: 114-282
Cow position: chr28:8347677-8347842 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 114-282
Cow position: chr28:32174575-32174740 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 80, 32

Conread position: 114-283
Cow position: chr28:30865363-30865529 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 114-284
Cow position: chr28:616329-616494 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 140, 0

Conread position: 114-284
Cow position: chr28:2752549-2752381 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 25, 0

Conread position: 114-284
Cow position: chr28:4765621-4765789 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 117, 26

Conread position: 114-284
Cow position: chr28:5144574-5144408 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 114-284
Cow position: chr28:5204138-5204308 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 19

Conread position: 114-284
Cow position: chr28:7009031-7008865 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 31, 0

Conread position: 114-284
Cow position: chr28:7372176-7372009 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 114-284
Cow position: chr28:7698034-7697869 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 30, 37

Conread position: 114-284
Cow position: chr28:7805479-7805309 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 59

Conread position: 114-284
Cow position: chr28:11559690-11559519 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 120
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 114-284
Cow position: chr28:19222205-19222038 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 19, 0

Conread position: 114-284
Cow position: chr28:21363691-21363853 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 114-284
Cow position: chr28:23410379-23410210 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 109, 34

Conread position: 114-284
Cow position: chr28:25399818-25399981 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 114-284
Cow position: chr28:26743570-26743739 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 26, 0

Conread position: 114-284
Cow position: chr28:26922421-26922255 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 114-284
Cow position: chr28:32365788-32365956 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 26, 0

Conread position: 115-283
Cow position: chr28:27161381-27161215 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 137
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 40, 0

Conread position: 117-284
Cow position: chr28:3726265-3726096 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 27, 39

Conread position: 118-284
Cow position: chr28:5931303-5931462 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 118-284
Cow position: chr28:20397421-20397257 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 22, 0

Conread position: 120-281
Cow position: chr28:30746777-30746619 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 143, 20

Conread position: 121-277
Cow position: chr28:19564279-19564122 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 121-280
Cow position: chr28:11752190-11752030 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 121-281
Cow position: chr28:7619200-7619040 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 121-281
Cow position: chr28:8408687-8408846 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 142, 23

Conread position: 121-282
Cow position: chr28:34843622-34843464 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 115
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 121-284
Cow position: chr28:17601600-17601441 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 121-284
Cow position: chr28:20313228-20313390 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 122-280
Cow position: chr28:21598300-21598141 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 149, 33

Conread position: 122-284
Cow position: chr28:17601922-17601762 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 122-284
Cow position: chr28:25249308-25249467 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 123-284
Cow position: chr28:777626-777789 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 116
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 124-283
Cow position: chr28:11866711-11866553 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 125-281
Cow position: chr28:2762150-2762305 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 125-281
Cow position: chr28:13474257-13474410 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 125-281
Cow position: chr28:14998021-14998176 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 148, 0

Conread position: 126-280
Cow position: chr28:19026052-19025896 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 112
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 126-284
Cow position: chr28:5437130-5436976 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 111, 0

Conread position: 126-284
Cow position: chr28:22571709-22571555 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 17, 32

Conread position: 126-284
Cow position: chr28:29434472-29434315 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 126-284
Cow position: chr28:33051989-33052149 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 27, 152

Conread position: 132-284
Cow position: chr28:26372703-26372850 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 133-277
Cow position: chr28:23793346-23793203 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 82, 12

Conread position: 133-284
Cow position: chr28:9294531-9294380 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 34

Conread position: 134-252
Cow position: chr28:21046612-21046495 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 134-284
Cow position: chr28:10615983-10615833 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 134-284
Cow position: chr28:14494788-14494936 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 109
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 103, 0

Conread position: 135-284
Cow position: chr28:13176717-13176576 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 135-284
Cow position: chr28:21355196-21355344 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 108
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 136-279
Cow position: chr28:3408254-3408111 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 11, 101

Conread position: 137-281
Cow position: chr28:2772681-2772820 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 137-283
Cow position: chr28:5236637-5236492 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 137-283
Cow position: chr28:34230193-34230340 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 107
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 137-284
Cow position: chr28:19216789-19216934 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 138-283
Cow position: chr28:17398263-17398122 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 138-283
Cow position: chr28:17414504-17414363 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 140-284
Cow position: chr28:8149662-8149519 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 16, 0

Conread position: 141-282
Cow position: chr28:21008696-21008555 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 16, 85

Conread position: 141-284
Cow position: chr28:3011297-3011157 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 102, 9

Conread position: 141-284
Cow position: chr28:4881270-4881127 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 142-284
Cow position: chr28:3143904-3143765 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 144-283
Cow position: chr28:18770056-18770192 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 10, 78

Conread position: 145-284
Cow position: chr28:7388793-7388659 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 147-276
Cow position: chr28:555480-555609 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 147-280
Cow position: chr28:24706873-24707006 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 149-284
Cow position: chr28:5867701-5867834 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 151-284
Cow position: chr28:2898969-2899102 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 152-281
Cow position: chr28:23724481-23724349 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 152-282
Cow position: chr28:7228404-7228280 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 42

Conread position: 152-283
Cow position: chr28:8147882-8147752 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 98
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 152-283
Cow position: chr28:14933939-14934070 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 97
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 152-284
Cow position: chr28:26719324-26719456 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 154-283
Cow position: chr28:25677359-25677229 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 155-280
Cow position: chr28:19295145-19295026 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 161-282
Cow position: chr28:19039029-19038908 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 93
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 168-284
Cow position: chr28:26784244-26784129 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 92, 0

Show alignments to all cow chromosomes.