Cow genome map

Conread name: rtra01_e11r1.y1

Conread position: 1-132
Cow position:
Alignm length: 135
Alignm identity: 104
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 33, 115

Conread position: 1-154
Cow position:
Alignm length: 157
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 21

Conread position: 1-157
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 137, 53

Conread position: 1-162
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 1-187
Cow position:
Alignm length: 196
Alignm identity: 149
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 56, 32

Conread position: 1-188
Cow position:
Alignm length: 193
Alignm identity: 137
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 27, 19

Conread position: 1-191
Cow position:
Alignm length: 196
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 11

Conread position: 1-225
Cow position:
Alignm length: 225
Alignm identity: 165
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 60, 0

Conread position: 1-240
Cow position:
Alignm length: 257
Alignm identity: 177
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 1-241
Cow position:
Alignm length: 256
Alignm identity: 187
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 45, 60

Conread position: 1-259
Cow position:
Alignm length: 275
Alignm identity: 195
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 32, 132

Conread position: 1-262
Cow position:
Alignm length: 279
Alignm identity: 201
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 59, 0

Conread position: 1-270
Cow position:
Alignm length: 290
Alignm identity: 208
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 59, 0

Conread position: 1-270
Cow position:
Alignm length: 281
Alignm identity: 201
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 123, 59

Conread position: 1-302
Cow position:
Alignm length: 312
Alignm identity: 219
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 65, 55

Conread position: 1-302
Cow position:
Alignm length: 321
Alignm identity: 225
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 66, 21

Conread position: 1-302
Cow position:
Alignm length: 333
Alignm identity: 246
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 61, 16

Conread position: 1-317
Cow position:
Alignm length: 337
Alignm identity: 240
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 81, 59

Conread position: 1-318
Cow position:
Alignm length: 336
Alignm identity: 239
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 8, 103

Conread position: 1-319
Cow position:
Alignm length: 339
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 125

Conread position: 1-324
Cow position:
Alignm length: 346
Alignm identity: 239
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 83, 42

Conread position: 1-325
Cow position:
Alignm length: 352
Alignm identity: 243
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 59, 261

Conread position: 1-327
Cow position:
Alignm length: 350
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 86

Conread position: 1-328
Cow position:
Alignm length: 347
Alignm identity: 240
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 50, 292

Conread position: 1-328
Cow position:
Alignm length: 349
Alignm identity: 238
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 33, 50

Conread position: 1-329
Cow position:
Alignm length: 349
Alignm identity: 240
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 99, 59

Conread position: 1-330
Cow position:
Alignm length: 361
Alignm identity: 246
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 93, 59

Conread position: 1-330
Cow position:
Alignm length: 351
Alignm identity: 250
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 27, 19

Conread position: 1-333
Cow position:
Alignm length: 361
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 119

Conread position: 1-356
Cow position:
Alignm length: 387
Alignm identity: 267
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 61, 30

Conread position: 1-370
Cow position:
Alignm length: 399
Alignm identity: 269
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 138, 59

Conread position: 2-301
Cow position:
Alignm length: 316
Alignm identity: 220
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 58, 123

Conread position: 2-302
Cow position:
Alignm length: 334
Alignm identity: 229
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 203

Conread position: 2-302
Cow position:
Alignm length: 325
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 193

Conread position: 2-318
Cow position:
Alignm length: 333
Alignm identity: 233
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 53, 46

Conread position: 2-327
Cow position:
Alignm length: 343
Alignm identity: 239
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 11, 126

Conread position: 2-330
Cow position:
Alignm length: 332
Alignm identity: 227
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 17, 38

Conread position: 2-338
Cow position:
Alignm length: 360
Alignm identity: 246
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 27, 42

Conread position: 3-301
Cow position:
Alignm length: 320
Alignm identity: 230
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 55, 0

Conread position: 3-327
Cow position:
Alignm length: 352
Alignm identity: 248
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 135, 100

Conread position: 4-319
Cow position:
Alignm length: 341
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 5-333
Cow position:
Alignm length: 344
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 53

Conread position: 6-312
Cow position:
Alignm length: 327
Alignm identity: 228
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 6, 59

Conread position: 6-316
Cow position:
Alignm length: 327
Alignm identity: 215
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 28, 176

Conread position: 6-330
Cow position:
Alignm length: 342
Alignm identity: 237
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 13, 0

Conread position: 6-338
Cow position:
Alignm length: 364
Alignm identity: 253
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 54, 0

Conread position: 6-338
Cow position:
Alignm length: 347
Alignm identity: 227
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 28, 52

Conread position: 7-253
Cow position:
Alignm length: 254
Alignm identity: 179
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 106, 49

Conread position: 10-302
Cow position:
Alignm length: 317
Alignm identity: 228
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 50, 222

Conread position: 10-310
Cow position:
Alignm length: 334
Alignm identity: 238
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 50, 198

Conread position: 10-313
Cow position:
Alignm length: 327
Alignm identity: 233
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 48, 0

Conread position: 10-330
Cow position:
Alignm length: 348
Alignm identity: 238
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 50, 175

Conread position: 10-330
Cow position:
Alignm length: 344
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 97

Conread position: 12-319
Cow position:
Alignm length: 318
Alignm identity: 211
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 191, 95

Conread position: 24-302
Cow position:
Alignm length: 294
Alignm identity: 202
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 33, 0

Conread position: 24-324
Cow position:
Alignm length: 308
Alignm identity: 205
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 28, 139

Conread position: 24-332
Cow position:
Alignm length: 313
Alignm identity: 204
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 48

Conread position: 25-318
Cow position:
Alignm length: 316
Alignm identity: 217
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 60, 96

Conread position: 26-330
Cow position:
Alignm length: 325
Alignm identity: 229
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 25, 132

Conread position: 27-327
Cow position:
Alignm length: 311
Alignm identity: 214
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 101, 20

Conread position: 28-302
Cow position:
Alignm length: 291
Alignm identity: 205
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 54, 32

Conread position: 28-330
Cow position:
Alignm length: 314
Alignm identity: 210
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 110, 32

Conread position: 36-342
Cow position:
Alignm length: 322
Alignm identity: 217
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 99, 13

Conread position: 38-316
Cow position:
Alignm length: 287
Alignm identity: 196
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 166, 14

Conread position: 38-319
Cow position:
Alignm length: 307
Alignm identity: 208
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 41, 21

Conread position: 38-319
Cow position:
Alignm length: 311
Alignm identity: 233
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 22, 70

Conread position: 40-327
Cow position:
Alignm length: 317
Alignm identity: 238
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 18, 45

Conread position: 40-339
Cow position:
Alignm length: 329
Alignm identity: 219
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 323

Conread position: 47-319
Cow position:
Alignm length: 304
Alignm identity: 214
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 125-327
Cow position:
Alignm length: 210
Alignm identity: 156
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 16, 61

Conread position: 132-300
Cow position:
Alignm length: 179
Alignm identity: 135
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 72, 15

Conread position: 135-269
Cow position:
Alignm length: 143
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 68, 42

Conread position: 135-286
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 68, 49

Conread position: 135-310
Cow position:
Alignm length: 186
Alignm identity: 144
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 69, 38

Conread position: 135-317
Cow position:
Alignm length: 192
Alignm identity: 148
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 69, 46

Conread position: 135-317
Cow position:
Alignm length: 195
Alignm identity: 146
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 69, 42

Conread position: 135-320
Cow position:
Alignm length: 197
Alignm identity: 148
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 69, 20

Conread position: 135-325
Cow position:
Alignm length: 203
Alignm identity: 151
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 69, 46

Conread position: 135-327
Cow position:
Alignm length: 206
Alignm identity: 158
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 69, 46

Conread position: 135-327
Cow position:
Alignm length: 205
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 69, 30

Conread position: 135-327
Cow position:
Alignm length: 195
Alignm identity: 149
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 69, 32

Conread position: 135-328
Cow position:
Alignm length: 202
Alignm identity: 151
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 69, 46

Conread position: 135-329
Cow position:
Alignm length: 208
Alignm identity: 164
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 69, 39

Conread position: 135-329
Cow position:
Alignm length: 201
Alignm identity: 148
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 69, 31

Conread position: 135-332
Cow position:
Alignm length: 211
Alignm identity: 167
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 69, 53

Conread position: 135-332
Cow position:
Alignm length: 210
Alignm identity: 154
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 69, 29

Conread position: 135-370
Cow position:
Alignm length: 248
Alignm identity: 172
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 69, 46

Conread position: 136-316
Cow position:
Alignm length: 192
Alignm identity: 147
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 99, 30

Conread position: 138-320
Cow position:
Alignm length: 190
Alignm identity: 144
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 66, 39

Conread position: 138-330
Cow position:
Alignm length: 203
Alignm identity: 155
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 66, 25

Conread position: 139-330
Cow position:
Alignm length: 203
Alignm identity: 147
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 34, 28

Conread position: 139-338
Cow position:
Alignm length: 214
Alignm identity: 154
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 65, 26

Conread position: 140-318
Cow position:
Alignm length: 190
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 49

Conread position: 140-330
Cow position:
Alignm length: 203
Alignm identity: 156
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 64, 41

Conread position: 140-330
Cow position:
Alignm length: 198
Alignm identity: 148
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 71, 41

Conread position: 140-330
Cow position:
Alignm length: 196
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 64, 27

Conread position: 140-332
Cow position:
Alignm length: 198
Alignm identity: 150
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 64, 27

Conread position: 141-333
Cow position:
Alignm length: 199
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 24

Conread position: 141-338
Cow position:
Alignm length: 205
Alignm identity: 152
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 63, 26

Conread position: 142-354
Cow position:
Alignm length: 220
Alignm identity: 157
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 62, 22

Conread position: 152-332
Cow position:
Alignm length: 191
Alignm identity: 146
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 14, 143

Conread position: 178-335
Cow position:
Alignm length: 165
Alignm identity: 122
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 8, 105

Show alignments to all cow chromosomes.