Cow genome map


           Conread name:
           rtra01_e11r1.y1
        

               Conread position:
               1-171
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               57, 108
               

               Conread position:
               1-240
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               57, 205
               

               Conread position:
               1-258
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               137, 45
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               222
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               133, 59
               

               Conread position:
               1-308
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               111, 34
               

               Conread position:
               1-324
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               99, 59
               

               Conread position:
               1-330
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-342
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               102, 18
               

               Conread position:
               2-301
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               27, 86
               

               Conread position:
               2-315
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               232
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               100, 188
               

               Conread position:
               2-317
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               231
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               17, 189
               

               Conread position:
               2-319
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               32, 224
               

               Conread position:
               2-330
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               32, 120
               

               Conread position:
               3-320
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               22, 78
               

               Conread position:
               3-329
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 195
               

               Conread position:
               3-330
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               31, 53
               

               Conread position:
               3-338
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               264
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               31, 64
               

               Conread position:
               4-330
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               24, 17
               

               Conread position:
               5-285
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               5-329
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               5-338
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               29, 233
               

               Conread position:
               7-338
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               260
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               100, 52
               

               Conread position:
               8-328
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               8, 17
               

               Conread position:
               10-316
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               38, 28
               

               Conread position:
               10-327
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               85, 50
               

               Conread position:
               11-327
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               84, 49
               

               Conread position:
               18-338
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               254
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               33, 44
               

               Conread position:
               20-210
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               38, 160
               

               Conread position:
               24-325
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               9, 25
               

               Conread position:
               60-319
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               64, 39
               

               Conread position:
               66-338
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               190
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               34, 219
               

               Conread position:
               93-302
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               7, 41
               

               Conread position:
               130-343
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               32, 5
               

               Conread position:
               135-316
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               106, 43
               

               Conread position:
               135-316
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               69, 40
               

               Conread position:
               135-330
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               65, 40
               

               Conread position:
               135-330
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               69, 46
               

               Conread position:
               135-330
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               33, 22
               

               Conread position:
               135-332
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               71, 32
               

               Conread position:
               136-330
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               48, 30
               

               Conread position:
               140-319
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               64, 27
               

               Conread position:
               140-338
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               90, 18
               

               Conread position:
               143-330
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               36, 59
               

               Conread position:
               154-305
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               49, 27
               

               Conread position:
               184-332
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               103, 0
               
Show alignments to all cow chromosomes.