Cow genome map


           Conread name:
           rtra01_e11r1.y1
        

               Conread position:
               1-198
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               53, 137
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               59, 208
               

               Conread position:
               1-294
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               116, 58
               

               Conread position:
               1-302
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1-313
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 188
               

               Conread position:
               1-319
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               242
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               130, 59
               

               Conread position:
               1-327
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               260
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               61, 222
               

               Conread position:
               1-330
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 59
               

               Conread position:
               1-333
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               95, 55
               

               Conread position:
               1-333
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               236
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               33, 145
               

               Conread position:
               1-334
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               250
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               59, 204
               

               Conread position:
               1-354
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               244
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               47, 30
               

               Conread position:
               2-240
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               94, 140
               

               Conread position:
               2-319
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               17, 59
               

               Conread position:
               2-327
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               23, 124
               

               Conread position:
               2-330
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               32, 91
               

               Conread position:
               2-375
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               270
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               24, 54
               

               Conread position:
               4-285
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               96, 56
               

               Conread position:
               4-319
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               54, 76
               

               Conread position:
               4-320
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               123, 55
               

               Conread position:
               4-403
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               294
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               107, 56
               

               Conread position:
               5-270
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               199, 52
               

               Conread position:
               5-319
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               30, 40
               

               Conread position:
               5-327
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               258
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               29, 305
               

               Conread position:
               6-319
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               234
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               97, 11
               

               Conread position:
               6-330
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               28, 54
               

               Conread position:
               10-198
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               116, 50
               

               Conread position:
               10-318
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               44, 92
               

               Conread position:
               10-327
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               251
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               47, 104
               

               Conread position:
               10-329
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               90, 49
               

               Conread position:
               11-154
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               17-315
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               96, 39
               

               Conread position:
               24-331
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               237
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               36, 14
               

               Conread position:
               25-322
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               99, 88
               

               Conread position:
               26-330
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               34, 59
               

               Conread position:
               27-338
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               242
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               39-317
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               218
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               68, 7
               

               Conread position:
               59-362
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               238
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               80, 19
               

               Conread position:
               61-330
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               94, 47
               

               Conread position:
               93-302
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               16, 73
               

               Conread position:
               105-330
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               33, 19
               

               Conread position:
               114-368
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               22, 54
               

               Conread position:
               134-333
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               105, 32
               

               Conread position:
               135-285
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               69, 46
               

               Conread position:
               135-302
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               69, 46
               

               Conread position:
               135-310
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               69, 53
               

               Conread position:
               135-321
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               69, 36
               

               Conread position:
               135-327
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               69, 46
               

               Conread position:
               135-329
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               68, 46
               

               Conread position:
               135-329
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               69, 46
               

               Conread position:
               135-338
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               69, 32
               

               Conread position:
               136-319
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               68, 45
               

               Conread position:
               136-330
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               68, 30
               

               Conread position:
               139-330
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               65, 42
               

               Conread position:
               140-330
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               61, 27
               

               Conread position:
               185-330
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               19, 0
               
Show alignments to all cow chromosomes.