Cow genome map


           Conread name:
           rtra01_e11r1.y1
        

               Conread position:
               1-135
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               137, 59
               

               Conread position:
               1-178
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               59, 184
               

               Conread position:
               1-204
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               27, 60
               

               Conread position:
               1-228
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               137, 56
               

               Conread position:
               1-230
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               57, 114
               

               Conread position:
               1-240
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               120, 59
               

               Conread position:
               1-271
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               208
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               61, 40
               

               Conread position:
               1-302
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               137, 18
               

               Conread position:
               1-313
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               229
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               56, 152
               

               Conread position:
               1-318
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               1-325
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               86, 59
               

               Conread position:
               1-329
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               137, 57
               

               Conread position:
               1-330
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               24, 59
               

               Conread position:
               1-333
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 59
               

               Conread position:
               1-333
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 198
               

               Conread position:
               1-338
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 59
               

               Conread position:
               2-329
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               24, 188
               

               Conread position:
               2-333
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               243
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               16, 34
               

               Conread position:
               2-333
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               31, 219
               

               Conread position:
               2-381
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               280
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               69, 8
               

               Conread position:
               3-198
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               31, 95
               

               Conread position:
               3-304
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               234
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               108, 57
               

               Conread position:
               3-310
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               232
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               16, 49
               

               Conread position:
               3-319
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               32, 67
               

               Conread position:
               3-324
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               230
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               31, 210
               

               Conread position:
               3-330
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 191
               

               Conread position:
               3-332
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               201, 46
               

               Conread position:
               4-198
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               134, 56
               

               Conread position:
               4-298
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               54, 259
               

               Conread position:
               5-318
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               237
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               142, 55
               

               Conread position:
               5-319
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               29, 45
               

               Conread position:
               5-329
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               27, 176
               

               Conread position:
               5-348
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               250
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               133, 55
               

               Conread position:
               6-331
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               68, 31
               

               Conread position:
               7-336
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               255
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               27, 349
               

               Conread position:
               10-308
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               9, 129
               

               Conread position:
               10-312
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               50, 210
               

               Conread position:
               10-317
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               10-327
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 49
               

               Conread position:
               10-329
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 81
               

               Conread position:
               11-234
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               13, 46
               

               Conread position:
               11-325
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               225
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               91, 7
               

               Conread position:
               16-319
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               24-327
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               33, 180
               

               Conread position:
               24-353
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               88, 28
               

               Conread position:
               26-333
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               7, 96
               

               Conread position:
               35-327
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               23, 165
               

               Conread position:
               44-327
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               54, 154
               

               Conread position:
               57-240
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               45, 140
               

               Conread position:
               59-333
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               53, 115
               

               Conread position:
               76-302
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               63, 159
               

               Conread position:
               133-330
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               71, 54
               

               Conread position:
               133-338
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               175
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               25, 56
               

               Conread position:
               135-241
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               69, 46
               

               Conread position:
               135-302
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               100, 46
               

               Conread position:
               135-319
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               69, 43
               

               Conread position:
               135-321
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               68, 46
               

               Conread position:
               135-325
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               69, 46
               

               Conread position:
               135-327
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               69, 46
               

               Conread position:
               135-329
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               170
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               69, 46
               

               Conread position:
               135-332
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               68, 54
               

               Conread position:
               135-334
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               70, 30
               

               Conread position:
               136-327
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               68, 45
               

               Conread position:
               136-330
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               68, 45
               

               Conread position:
               138-329
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               66, 27
               

               Conread position:
               138-350
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               109, 58
               

               Conread position:
               138-352
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               66, 35
               

               Conread position:
               139-339
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               44, 28
               

               Conread position:
               140-318
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               85, 27
               

               Conread position:
               140-318
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               64, 72
               

               Conread position:
               140-330
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               64, 24
               

               Conread position:
               141-338
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               63, 24
               

               Conread position:
               144-326
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               60, 23
               

               Conread position:
               144-330
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               60, 23
               

               Conread position:
               179-330
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               54, 25
               
Show alignments to all cow chromosomes.