Cow genome map


           Conread name:
           rtra01_e11r1.y1
        

               Conread position:
               1-186
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               123, 52
               

               Conread position:
               1-222
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               59, 188
               

               Conread position:
               1-240
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               59, 32
               

               Conread position:
               1-240
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               17, 106
               

               Conread position:
               1-302
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               225
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               101, 59
               

               Conread position:
               1-302
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 59
               

               Conread position:
               1-302
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               43, 50
               

               Conread position:
               1-319
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               247
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-319
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               259
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               59, 205
               

               Conread position:
               1-323
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               247
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               57, 207
               

               Conread position:
               1-325
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               242
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               97, 44
               

               Conread position:
               1-327
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 229
               

               Conread position:
               1-331
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               59, 107
               

               Conread position:
               1-338
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               249
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               137, 34
               

               Conread position:
               2-119
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               2-254
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               27, 79
               

               Conread position:
               2-327
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               252
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               32, 20
               

               Conread position:
               2-332
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               23, 32
               

               Conread position:
               3-137
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               3-313
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               3-327
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               255
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               38, 195
               

               Conread position:
               4-178
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               135, 56
               

               Conread position:
               4-301
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               96, 42
               

               Conread position:
               4-323
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               58, 238
               

               Conread position:
               5-338
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               257
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               52, 179
               

               Conread position:
               6-236
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               48, 40
               

               Conread position:
               6-241
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               23, 52
               

               Conread position:
               6-338
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               245
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               29, 122
               

               Conread position:
               10-268
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               203
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               112, 164
               

               Conread position:
               10-319
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 103
               

               Conread position:
               10-327
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               121, 49
               

               Conread position:
               10-330
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               228
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               95, 50
               

               Conread position:
               10-332
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               194, 89
               

               Conread position:
               10-338
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               211, 47
               

               Conread position:
               10-339
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               248
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               19, 168
               

               Conread position:
               10-372
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               269
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               23-330
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               20, 91
               

               Conread position:
               24-262
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               36, 180
               

               Conread position:
               28-330
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               87, 29
               

               Conread position:
               28-330
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               218
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               32-338
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               26, 178
               

               Conread position:
               38-355
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               13, 31
               

               Conread position:
               59-299
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               37, 10
               

               Conread position:
               59-331
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               79, 118
               

               Conread position:
               60-320
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               38, 104
               

               Conread position:
               76-339
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               20, 60
               

               Conread position:
               94-318
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               110, 43
               

               Conread position:
               111-330
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               135-302
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               69, 23
               

               Conread position:
               135-317
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               69, 29
               

               Conread position:
               135-319
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               69, 48
               

               Conread position:
               135-327
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               68, 40
               

               Conread position:
               135-329
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               69, 38
               

               Conread position:
               135-329
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               69, 46
               

               Conread position:
               135-330
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               70, 58
               

               Conread position:
               135-330
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               69, 46
               

               Conread position:
               135-333
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               69, 46
               

               Conread position:
               135-338
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               37, 54
               

               Conread position:
               135-342
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               108, 32
               

               Conread position:
               135-342
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               68, 52
               

               Conread position:
               135-349
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               69, 46
               

               Conread position:
               135-386
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               69, 46
               

               Conread position:
               138-298
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               59, 37
               

               Conread position:
               138-304
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               45, 115
               

               Conread position:
               138-330
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               66, 29
               

               Conread position:
               140-302
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               58, 41
               

               Conread position:
               140-316
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               140-317
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               64, 28
               

               Conread position:
               140-319
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               63, 35
               

               Conread position:
               140-328
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               64, 24
               

               Conread position:
               140-329
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               64, 23
               

               Conread position:
               140-329
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               64, 24
               

               Conread position:
               140-330
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               64, 41
               

               Conread position:
               140-350
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               64, 27
               

               Conread position:
               144-329
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               60, 23
               

               Conread position:
               144-339
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               60, 21
               
Show alignments to all cow chromosomes.