Cow genome map


           Conread name:
           rtra01_e11r1.y1
        

               Conread position:
               1-117
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               1-137
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               1-259
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               33, 225
               

               Conread position:
               1-262
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               198
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               137, 59
               

               Conread position:
               1-275
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               30, 35
               

               Conread position:
               1-286
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               131, 61
               

               Conread position:
               1-302
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               34, 198
               

               Conread position:
               1-302
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               61, 77
               

               Conread position:
               1-313
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               99, 63
               

               Conread position:
               1-314
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               33, 23
               

               Conread position:
               1-318
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               238
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               31, 167
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               247
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               56, 66
               

               Conread position:
               1-327
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               248
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               137, 63
               

               Conread position:
               1-329
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               251
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               59, 24
               

               Conread position:
               1-330
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 120
               

               Conread position:
               1-330
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               245
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               130, 57
               

               Conread position:
               1-333
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               19, 29
               

               Conread position:
               1-334
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 74
               

               Conread position:
               1-338
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               2-298
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               58, 197
               

               Conread position:
               2-330
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               242
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               32, 118
               

               Conread position:
               3-330
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               22, 232
               

               Conread position:
               4-302
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               219
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               132, 32
               

               Conread position:
               5-241
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               30, 110
               

               Conread position:
               6-327
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               234
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               23, 228
               

               Conread position:
               6-327
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 150
               

               Conread position:
               6-329
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               116, 55
               

               Conread position:
               6-338
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               256
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               51, 271
               

               Conread position:
               10-153
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               48, 104
               

               Conread position:
               10-329
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               10-330
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 78
               

               Conread position:
               13-352
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               15-347
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               243
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               17-327
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               246
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               24-319
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               34, 264
               

               Conread position:
               24-329
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               24-330
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               36, 171
               

               Conread position:
               25-328
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               54, 10
               

               Conread position:
               28-332
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               30, 76
               

               Conread position:
               40-332
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               18, 65
               

               Conread position:
               42-318
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 64
               

               Conread position:
               135-295
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               69, 145
               

               Conread position:
               135-296
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               69, 43
               

               Conread position:
               135-297
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               69, 47
               

               Conread position:
               135-298
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               106, 46
               

               Conread position:
               135-325
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               104, 46
               

               Conread position:
               135-327
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               159
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               68, 42
               

               Conread position:
               135-329
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               69, 46
               

               Conread position:
               135-330
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               135-330
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               69, 53
               

               Conread position:
               135-330
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               69, 33
               

               Conread position:
               135-330
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               135-338
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               135-338
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               69, 13
               

               Conread position:
               135-338
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               106, 32
               

               Conread position:
               135-342
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               69, 38
               

               Conread position:
               138-330
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               66, 26
               

               Conread position:
               138-330
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               66, 43
               

               Conread position:
               139-319
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               65, 30
               

               Conread position:
               139-326
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               140-270
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               64, 41
               

               Conread position:
               140-329
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               64, 41
               

               Conread position:
               140-330
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               64, 24
               

               Conread position:
               148-298
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               56, 16
               
Show alignments to all cow chromosomes.