Cow genome map
Conread name: | rtra01_e11r1.y1 |
Conread position: | 1-117 |
Cow position: | chr18:26372979-26372861 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 94 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 1-137 |
Cow position: | chr18:213478-213616 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 109 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 1-259 |
Cow position: | chr18:23714824-23715110 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 213 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 33, 225 |
Conread position: | 1-262 |
Cow position: | chr18:15831538-15831802 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 198 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 137, 59 |
Conread position: | 1-275 |
Cow position: | chr18:44493427-44493708 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 209 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 30, 35 |
Conread position: | 1-286 |
Cow position: | chr18:6157972-6157670 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 207 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 131, 61 |
Conread position: | 1-302 |
Cow position: | chr18:21176246-21175917 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 236 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 34, 198 |
Conread position: | 1-302 |
Cow position: | chr18:40893332-40893029 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 217 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 61, 77 |
Conread position: | 1-313 |
Cow position: | chr18:34324896-34325237 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 242 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 99, 63 |
Conread position: | 1-314 |
Cow position: | chr18:32773937-32773599 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 244 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 33, 23 |
Conread position: | 1-318 |
Cow position: | chr18:4578428-4578753 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 238 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 31, 167 |
Conread position: | 1-326 |
Cow position: | chr18:38793828-38794152 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 247 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 56, 66 |
Conread position: | 1-327 |
Cow position: | chr18:25970576-25970925 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 248 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 137, 63 |
Conread position: | 1-329 |
Cow position: | chr18:25002831-25003172 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 251 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 59, 24 |
Conread position: | 1-330 |
Cow position: | chr18:45961212-45961555 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 120 |
Conread position: | 1-330 |
Cow position: | chr18:55696965-55697311 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 245 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 130, 57 |
Conread position: | 1-333 |
Cow position: | chr18:21575045-21574704 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 241 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 19, 29 |
Conread position: | 1-334 |
Cow position: | chr18:16726707-16726345 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 74 |
Conread position: | 1-338 |
Cow position: | chr18:21681914-21682274 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 2-298 |
Cow position: | chr18:1495361-1495044 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 217 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 58, 197 |
Conread position: | 2-330 |
Cow position: | chr18:16134255-16134604 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 242 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 32, 118 |
Conread position: | 3-330 |
Cow position: | chr18:23317051-23317399 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 229 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 22, 232 |
Conread position: | 4-302 |
Cow position: | chr18:33275345-33275043 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 219 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 132, 32 |
Conread position: | 5-241 |
Cow position: | chr18:2619158-2619396 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 167 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 30, 110 |
Conread position: | 6-327 |
Cow position: | chr18:51271694-51272033 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 234 |
Alignm E-value: | 7e-30 |
Alignm gaps (pig, cow): | 23, 228 |
Conread position: | 6-327 |
Cow position: | chr18:51537626-51537955 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 150 |
Conread position: | 6-329 |
Cow position: | chr18:17324755-17324415 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 230 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 116, 55 |
Conread position: | 6-338 |
Cow position: | chr18:34051937-34052293 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 256 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 51, 271 |
Conread position: | 10-153 |
Cow position: | chr18:51002489-51002628 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 110 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 48, 104 |
Conread position: | 10-329 |
Cow position: | chr18:11322646-11322294 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 234 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 10-330 |
Cow position: | chr18:43113895-43114216 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 78 |
Conread position: | 13-352 |
Cow position: | chr18:11685029-11684671 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 229 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 15-347 |
Cow position: | chr18:1144139-1144507 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 243 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 17-327 |
Cow position: | chr18:42061119-42060783 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 246 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 24-319 |
Cow position: | chr18:26535472-26535801 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 242 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 34, 264 |
Conread position: | 24-329 |
Cow position: | chr18:40202768-40203094 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 231 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 19, 9 |
Conread position: | 24-330 |
Cow position: | chr18:4516065-4515731 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 237 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 36, 171 |
Conread position: | 25-328 |
Cow position: | chr18:23424934-23424634 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 220 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 54, 10 |
Conread position: | 28-332 |
Cow position: | chr18:13172501-13172821 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 217 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 30, 76 |
Conread position: | 40-332 |
Cow position: | chr18:50993250-50993568 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 224 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 18, 65 |
Conread position: | 42-318 |
Cow position: | chr18:23652603-23652897 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 64 |
Conread position: | 135-295 |
Cow position: | chr18:19363839-19363675 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 124 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 69, 145 |
Conread position: | 135-296 |
Cow position: | chr18:22411711-22411876 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 131 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 69, 43 |
Conread position: | 135-297 |
Cow position: | chr18:17669898-17670062 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 131 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 69, 47 |
Conread position: | 135-298 |
Cow position: | chr18:19487017-19486853 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 128 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 106, 46 |
Conread position: | 135-325 |
Cow position: | chr18:36478103-36477907 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 153 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 104, 46 |
Conread position: | 135-327 |
Cow position: | chr18:51298383-51298188 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 159 |
Alignm E-value: | 8.99634e-43 |
Alignm gaps (pig, cow): | 68, 42 |
Conread position: | 135-329 |
Cow position: | chr18:11367856-11368058 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 153 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 69, 46 |
Conread position: | 135-330 |
Cow position: | chr18:8170093-8169878 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 154 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 135-330 |
Cow position: | chr18:16842159-16842361 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 155 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 69, 53 |
Conread position: | 135-330 |
Cow position: | chr18:23807969-23808169 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 153 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 69, 33 |
Conread position: | 135-330 |
Cow position: | chr18:49161539-49161752 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 156 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 135-338 |
Cow position: | chr18:22065449-22065667 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 166 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 135-338 |
Cow position: | chr18:32860547-32860342 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 163 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 69, 13 |
Conread position: | 135-338 |
Cow position: | chr18:36445343-36445126 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 160 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 106, 32 |
Conread position: | 135-342 |
Cow position: | chr18:50700575-50700358 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 174 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 69, 38 |
Conread position: | 138-330 |
Cow position: | chr18:4648840-4649031 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 146 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 66, 26 |
Conread position: | 138-330 |
Cow position: | chr18:29768816-29768618 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 159 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 66, 43 |
Conread position: | 139-319 |
Cow position: | chr18:36098103-36097916 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 137 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 65, 30 |
Conread position: | 139-326 |
Cow position: | chr18:5995367-5995180 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 142 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 62, 19 |
Conread position: | 140-270 |
Cow position: | chr18:219233-219100 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 105 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 64, 41 |
Conread position: | 140-329 |
Cow position: | chr18:44262525-44262328 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 151 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 64, 41 |
Conread position: | 140-330 |
Cow position: | chr18:52637622-52637825 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 146 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 64, 24 |
Conread position: | 148-298 |
Cow position: | chr18:33793598-33793447 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 118 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 56, 16 |
Show alignments to all cow chromosomes.