Cow genome map

Conread name: rtra01_e11r1.y1

Conread position: 1-133
Cow position:
Alignm length: 133
Alignm identity: 106
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 1-137
Cow position:
Alignm length: 139
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 1-183
Cow position:
Alignm length: 184
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 137, 59

Conread position: 1-191
Cow position:
Alignm length: 200
Alignm identity: 144
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 125, 57

Conread position: 1-214
Cow position:
Alignm length: 216
Alignm identity: 150
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 70, 21

Conread position: 1-251
Cow position:
Alignm length: 254
Alignm identity: 181
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 57, 100

Conread position: 1-285
Cow position:
Alignm length: 300
Alignm identity: 211
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 63, 42

Conread position: 1-302
Cow position:
Alignm length: 326
Alignm identity: 233
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 59, 24

Conread position: 1-302
Cow position:
Alignm length: 331
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 195

Conread position: 1-302
Cow position:
Alignm length: 332
Alignm identity: 228
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 138, 34

Conread position: 1-309
Cow position:
Alignm length: 337
Alignm identity: 233
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 77, 51

Conread position: 1-319
Cow position:
Alignm length: 348
Alignm identity: 242
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 33, 193

Conread position: 1-323
Cow position:
Alignm length: 345
Alignm identity: 244
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 101, 30

Conread position: 1-327
Cow position:
Alignm length: 353
Alignm identity: 255
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 59, 31

Conread position: 1-327
Cow position:
Alignm length: 344
Alignm identity: 233
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 18, 32

Conread position: 1-327
Cow position:
Alignm length: 346
Alignm identity: 235
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 54, 145

Conread position: 1-327
Cow position:
Alignm length: 332
Alignm identity: 229
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 138, 59

Conread position: 1-328
Cow position:
Alignm length: 351
Alignm identity: 240
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 18, 40

Conread position: 1-330
Cow position:
Alignm length: 347
Alignm identity: 243
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 57, 19

Conread position: 1-339
Cow position:
Alignm length: 364
Alignm identity: 262
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 59, 201

Conread position: 1-339
Cow position:
Alignm length: 348
Alignm identity: 240
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 34, 103

Conread position: 1-347
Cow position:
Alignm length: 369
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 59

Conread position: 1-370
Cow position:
Alignm length: 399
Alignm identity: 275
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 93, 8

Conread position: 2-258
Cow position:
Alignm length: 272
Alignm identity: 182
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 30

Conread position: 2-268
Cow position:
Alignm length: 277
Alignm identity: 195
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 33, 184

Conread position: 2-276
Cow position:
Alignm length: 289
Alignm identity: 199
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 22, 174

Conread position: 2-302
Cow position:
Alignm length: 315
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 58

Conread position: 2-310
Cow position:
Alignm length: 318
Alignm identity: 221
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 17, 140

Conread position: 2-316
Cow position:
Alignm length: 324
Alignm identity: 225
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 17, 108

Conread position: 2-327
Cow position:
Alignm length: 354
Alignm identity: 244
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 54, 19

Conread position: 2-329
Cow position:
Alignm length: 344
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 57

Conread position: 2-332
Cow position:
Alignm length: 348
Alignm identity: 241
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 32, 94

Conread position: 2-334
Cow position:
Alignm length: 358
Alignm identity: 239
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 17, 36

Conread position: 2-338
Cow position:
Alignm length: 361
Alignm identity: 248
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 16, 0

Conread position: 3-318
Cow position:
Alignm length: 350
Alignm identity: 256
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 57, 200

Conread position: 3-319
Cow position:
Alignm length: 353
Alignm identity: 251
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 57, 14

Conread position: 3-338
Cow position:
Alignm length: 372
Alignm identity: 262
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 57, 0

Conread position: 4-183
Cow position:
Alignm length: 186
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 110

Conread position: 4-329
Cow position:
Alignm length: 342
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 6

Conread position: 4-330
Cow position:
Alignm length: 359
Alignm identity: 250
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 15, 199

Conread position: 4-330
Cow position:
Alignm length: 357
Alignm identity: 257
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 6, 94

Conread position: 4-338
Cow position:
Alignm length: 364
Alignm identity: 261
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 109, 56

Conread position: 5-319
Cow position:
Alignm length: 348
Alignm identity: 248
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 133, 55

Conread position: 5-330
Cow position:
Alignm length: 342
Alignm identity: 235
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 49, 115

Conread position: 5-333
Cow position:
Alignm length: 343
Alignm identity: 236
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 53, 145

Conread position: 5-342
Cow position:
Alignm length: 348
Alignm identity: 240
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 41, 163

Conread position: 6-202
Cow position:
Alignm length: 204
Alignm identity: 154
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 111, 31

Conread position: 6-253
Cow position:
Alignm length: 254
Alignm identity: 177
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 52, 165

Conread position: 6-319
Cow position:
Alignm length: 338
Alignm identity: 234
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 114, 50

Conread position: 6-331
Cow position:
Alignm length: 338
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 44

Conread position: 7-319
Cow position:
Alignm length: 342
Alignm identity: 240
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 25, 199

Conread position: 10-324
Cow position:
Alignm length: 330
Alignm identity: 228
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 69, 50

Conread position: 10-352
Cow position:
Alignm length: 359
Alignm identity: 247
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 50, 178

Conread position: 12-248
Cow position:
Alignm length: 238
Alignm identity: 169
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 192, 48

Conread position: 12-330
Cow position:
Alignm length: 348
Alignm identity: 252
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 48, 16

Conread position: 12-330
Cow position:
Alignm length: 345
Alignm identity: 248
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 15, 73

Conread position: 12-330
Cow position:
Alignm length: 356
Alignm identity: 252
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 15, 0

Conread position: 14-333
Cow position:
Alignm length: 353
Alignm identity: 244
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 40, 180

Conread position: 17-342
Cow position:
Alignm length: 336
Alignm identity: 225
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 130, 94

Conread position: 17-383
Cow position:
Alignm length: 386
Alignm identity: 255
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 40, 60

Conread position: 24-350
Cow position:
Alignm length: 353
Alignm identity: 240
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 27, 171

Conread position: 25-330
Cow position:
Alignm length: 315
Alignm identity: 223
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 35, 92

Conread position: 26-240
Cow position:
Alignm length: 232
Alignm identity: 168
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 32, 171

Conread position: 26-330
Cow position:
Alignm length: 322
Alignm identity: 223
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 113, 34

Conread position: 26-350
Cow position:
Alignm length: 332
Alignm identity: 220
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 31, 113

Conread position: 27-330
Cow position:
Alignm length: 323
Alignm identity: 218
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 30, 172

Conread position: 35-284
Cow position:
Alignm length: 260
Alignm identity: 180
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 103, 24

Conread position: 44-343
Cow position:
Alignm length: 323
Alignm identity: 226
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 28, 76

Conread position: 55-301
Cow position:
Alignm length: 255
Alignm identity: 177
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 29, 133

Conread position: 83-327
Cow position:
Alignm length: 251
Alignm identity: 190
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 55, 78

Conread position: 130-285
Cow position:
Alignm length: 165
Alignm identity: 132
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 74, 5

Conread position: 131-302
Cow position:
Alignm length: 178
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 72, 36

Conread position: 134-327
Cow position:
Alignm length: 204
Alignm identity: 148
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 70, 25

Conread position: 135-285
Cow position:
Alignm length: 161
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 69, 46

Conread position: 135-286
Cow position:
Alignm length: 154
Alignm identity: 123
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 53, 36

Conread position: 135-319
Cow position:
Alignm length: 195
Alignm identity: 148
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 69, 31

Conread position: 135-328
Cow position:
Alignm length: 206
Alignm identity: 152
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 104, 46

Conread position: 135-329
Cow position:
Alignm length: 207
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 69, 28

Conread position: 135-329
Cow position:
Alignm length: 199
Alignm identity: 153
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 69, 46

Conread position: 135-329
Cow position:
Alignm length: 212
Alignm identity: 152
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 135-330
Cow position:
Alignm length: 202
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 5

Conread position: 135-352
Cow position:
Alignm length: 222
Alignm identity: 152
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 152, 46

Conread position: 138-294
Cow position:
Alignm length: 163
Alignm identity: 126
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 65, 43

Conread position: 139-319
Cow position:
Alignm length: 188
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 100, 28

Conread position: 139-333
Cow position:
Alignm length: 216
Alignm identity: 164
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 140-316
Cow position:
Alignm length: 186
Alignm identity: 137
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 64, 24

Conread position: 140-330
Cow position:
Alignm length: 197
Alignm identity: 138
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 64, 23

Conread position: 140-330
Cow position:
Alignm length: 201
Alignm identity: 150
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 64, 27

Conread position: 143-327
Cow position:
Alignm length: 199
Alignm identity: 145
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 61, 38

Conread position: 152-324
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 51, 15

Conread position: 168-324
Cow position:
Alignm length: 171
Alignm identity: 136
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 36, 20

Show alignments to all cow chromosomes.