Cow genome map

Conread name: rtra01_e11r1.y1

Conread position: 1-153
Cow position:
Alignm length: 156
Alignm identity: 116
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 1-191
Cow position:
Alignm length: 193
Alignm identity: 139
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 79, 53

Conread position: 1-214
Cow position:
Alignm length: 223
Alignm identity: 162
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 59, 119

Conread position: 1-255
Cow position:
Alignm length: 274
Alignm identity: 189
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 59, 11

Conread position: 1-302
Cow position:
Alignm length: 314
Alignm identity: 222
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 61, 106

Conread position: 1-305
Cow position:
Alignm length: 321
Alignm identity: 222
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 59, 43

Conread position: 1-312
Cow position:
Alignm length: 348
Alignm identity: 244
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 53, 110

Conread position: 1-319
Cow position:
Alignm length: 343
Alignm identity: 239
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 57, 35

Conread position: 1-320
Cow position:
Alignm length: 338
Alignm identity: 230
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 151, 59

Conread position: 1-326
Cow position:
Alignm length: 352
Alignm identity: 247
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 131, 59

Conread position: 1-330
Cow position:
Alignm length: 353
Alignm identity: 253
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 11, 269

Conread position: 1-330
Cow position:
Alignm length: 354
Alignm identity: 257
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 59, 30

Conread position: 1-338
Cow position:
Alignm length: 356
Alignm identity: 256
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 99, 59

Conread position: 1-339
Cow position:
Alignm length: 355
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 80

Conread position: 1-342
Cow position:
Alignm length: 367
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 119

Conread position: 1-377
Cow position:
Alignm length: 410
Alignm identity: 279
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 137, 58

Conread position: 2-319
Cow position:
Alignm length: 347
Alignm identity: 243
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 17, 37

Conread position: 2-326
Cow position:
Alignm length: 353
Alignm identity: 244
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 100, 198

Conread position: 2-330
Cow position:
Alignm length: 338
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 49

Conread position: 2-335
Cow position:
Alignm length: 367
Alignm identity: 250
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 17, 37

Conread position: 2-340
Cow position:
Alignm length: 370
Alignm identity: 262
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 26, 90

Conread position: 2-375
Cow position:
Alignm length: 411
Alignm identity: 279
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 17, 165

Conread position: 3-320
Cow position:
Alignm length: 340
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 17

Conread position: 3-350
Cow position:
Alignm length: 381
Alignm identity: 271
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 31, 197

Conread position: 5-253
Cow position:
Alignm length: 260
Alignm identity: 175
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 28, 110

Conread position: 10-262
Cow position:
Alignm length: 273
Alignm identity: 197
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 70, 50

Conread position: 10-329
Cow position:
Alignm length: 347
Alignm identity: 246
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 48, 0

Conread position: 17-266
Cow position:
Alignm length: 266
Alignm identity: 182
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 121, 43

Conread position: 24-241
Cow position:
Alignm length: 239
Alignm identity: 173
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 177

Conread position: 24-327
Cow position:
Alignm length: 330
Alignm identity: 223
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 33, 254

Conread position: 24-329
Cow position:
Alignm length: 319
Alignm identity: 217
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 7, 18

Conread position: 24-330
Cow position:
Alignm length: 326
Alignm identity: 228
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 23, 0

Conread position: 24-355
Cow position:
Alignm length: 349
Alignm identity: 235
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 11, 56

Conread position: 34-302
Cow position:
Alignm length: 280
Alignm identity: 187
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 104, 26

Conread position: 38-342
Cow position:
Alignm length: 317
Alignm identity: 213
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 19, 76

Conread position: 39-330
Cow position:
Alignm length: 297
Alignm identity: 199
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 18, 121

Conread position: 40-327
Cow position:
Alignm length: 311
Alignm identity: 232
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 20, 6

Conread position: 41-330
Cow position:
Alignm length: 309
Alignm identity: 223
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 16, 8

Conread position: 46-327
Cow position:
Alignm length: 304
Alignm identity: 201
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 57-327
Cow position:
Alignm length: 280
Alignm identity: 187
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 125, 78

Conread position: 135-296
Cow position:
Alignm length: 167
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 69, 45

Conread position: 135-296
Cow position:
Alignm length: 172
Alignm identity: 133
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 69, 13

Conread position: 135-318
Cow position:
Alignm length: 189
Alignm identity: 145
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 69, 39

Conread position: 135-322
Cow position:
Alignm length: 196
Alignm identity: 150
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 69, 46

Conread position: 135-327
Cow position:
Alignm length: 202
Alignm identity: 159
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 69, 53

Conread position: 135-329
Cow position:
Alignm length: 206
Alignm identity: 148
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 49, 32

Conread position: 135-330
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 46, 29

Conread position: 135-338
Cow position:
Alignm length: 219
Alignm identity: 158
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 69, 46

Conread position: 137-350
Cow position:
Alignm length: 218
Alignm identity: 152
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 67, 35

Conread position: 138-330
Cow position:
Alignm length: 208
Alignm identity: 155
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 66, 43

Conread position: 140-325
Cow position:
Alignm length: 194
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 18

Conread position: 140-330
Cow position:
Alignm length: 202
Alignm identity: 151
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 98, 27

Conread position: 140-330
Cow position:
Alignm length: 198
Alignm identity: 142
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 64, 27

Conread position: 140-338
Cow position:
Alignm length: 212
Alignm identity: 148
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 141-317
Cow position:
Alignm length: 190
Alignm identity: 145
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 63, 44

Conread position: 141-331
Cow position:
Alignm length: 202
Alignm identity: 147
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 96, 26

Conread position: 168-342
Cow position:
Alignm length: 182
Alignm identity: 137
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 11, 0

Show alignments to all cow chromosomes.