Cow genome map


           Conread name:
           rtra01_e11r1.y1
        

               Conread position:
               1-186
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               137, 59
               

               Conread position:
               1-191
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               148, 59
               

               Conread position:
               1-240
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               100, 57
               

               Conread position:
               1-302
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               44, 61
               

               Conread position:
               1-319
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               249
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               96, 59
               

               Conread position:
               1-324
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               253
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               135, 45
               

               Conread position:
               1-327
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               246
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               106, 59
               

               Conread position:
               1-329
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               253
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               57, 16
               

               Conread position:
               1-329
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               59, 30
               

               Conread position:
               1-331
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               153, 54
               

               Conread position:
               1-333
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               250
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               119, 55
               

               Conread position:
               1-334
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               253
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               18, 52
               

               Conread position:
               1-338
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 57
               

               Conread position:
               1-343
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               34, 52
               

               Conread position:
               1-367
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               287
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               33, 284
               

               Conread position:
               1-384
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               275
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               127, 59
               

               Conread position:
               1-410
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 203
               

               Conread position:
               2-129
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               2-276
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               55, 77
               

               Conread position:
               2-314
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               34, 184
               

               Conread position:
               2-329
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               260
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               32, 209
               

               Conread position:
               2-336
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               247
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               14, 59
               

               Conread position:
               2-338
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               249
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               17, 191
               

               Conread position:
               2-383
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               266
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               56, 367
               

               Conread position:
               3-319
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               31, 39
               

               Conread position:
               4-333
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               256
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               56, 267
               

               Conread position:
               5-327
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               248
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               133, 55
               

               Conread position:
               5-330
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               29, 176
               

               Conread position:
               5-333
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               5-354
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               259
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               55, 168
               

               Conread position:
               10-285
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               24, 66
               

               Conread position:
               15-332
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               19, 168
               

               Conread position:
               24-273
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               40, 209
               

               Conread position:
               25-325
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               242
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               75, 34
               

               Conread position:
               26-316
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               178, 87
               

               Conread position:
               29-301
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               214
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               29, 5
               

               Conread position:
               35-311
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               27, 45
               

               Conread position:
               78-312
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               79-330
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               59, 228
               

               Conread position:
               80-307
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               58, 197
               

               Conread position:
               132-330
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               56, 26
               

               Conread position:
               135-305
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               147, 46
               

               Conread position:
               135-318
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               68, 42
               

               Conread position:
               135-319
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               69, 23
               

               Conread position:
               135-325
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               69, 38
               

               Conread position:
               135-327
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               69, 29
               

               Conread position:
               135-328
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               69, 41
               

               Conread position:
               135-328
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               69, 46
               

               Conread position:
               135-329
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               69, 29
               

               Conread position:
               135-330
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               70, 53
               

               Conread position:
               135-338
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               69, 37
               

               Conread position:
               135-352
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               69, 46
               

               Conread position:
               136-338
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               68, 46
               

               Conread position:
               137-329
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               46, 142
               

               Conread position:
               139-286
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               65, 26
               

               Conread position:
               140-330
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               64, 102
               

               Conread position:
               140-330
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               64, 24
               

               Conread position:
               141-330
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               63, 26
               

               Conread position:
               146-329
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               58, 21
               

               Conread position:
               176-330
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               28, 18
               

               Conread position:
               186-330
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               19, 0
               
Show alignments to all cow chromosomes.