Cow genome map

Conread name: rtra01_e11r1.y1

Conread position: 1-178
Cow position:
Alignm length: 182
Alignm identity: 130
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 137, 54

Conread position: 1-234
Cow position:
Alignm length: 255
Alignm identity: 183
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 1-236
Cow position:
Alignm length: 239
Alignm identity: 167
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 137, 59

Conread position: 1-245
Cow position:
Alignm length: 261
Alignm identity: 192
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 137, 63

Conread position: 1-302
Cow position:
Alignm length: 321
Alignm identity: 221
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 59, 0

Conread position: 1-310
Cow position:
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 1-313
Cow position:
Alignm length: 337
Alignm identity: 232
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 54, 244

Conread position: 1-317
Cow position:
Alignm length: 338
Alignm identity: 244
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 115, 59

Conread position: 1-321
Cow position:
Alignm length: 347
Alignm identity: 248
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 59, 238

Conread position: 1-324
Cow position:
Alignm length: 345
Alignm identity: 234
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 99, 16

Conread position: 1-327
Cow position:
Alignm length: 339
Alignm identity: 235
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 36, 60

Conread position: 1-327
Cow position:
Alignm length: 347
Alignm identity: 242
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 50, 194

Conread position: 1-327
Cow position:
Alignm length: 358
Alignm identity: 245
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 50, 0

Conread position: 1-329
Cow position:
Alignm length: 358
Alignm identity: 260
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 53, 83

Conread position: 1-330
Cow position:
Alignm length: 339
Alignm identity: 238
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 19, 23

Conread position: 1-330
Cow position:
Alignm length: 348
Alignm identity: 232
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 53, 142

Conread position: 1-330
Cow position:
Alignm length: 357
Alignm identity: 243
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 128, 60

Conread position: 1-333
Cow position:
Alignm length: 355
Alignm identity: 245
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 18, 0

Conread position: 2-199
Cow position:
Alignm length: 201
Alignm identity: 152
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 136, 20

Conread position: 2-240
Cow position:
Alignm length: 246
Alignm identity: 177
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 56, 75

Conread position: 2-268
Cow position:
Alignm length: 295
Alignm identity: 209
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 32, 212

Conread position: 2-327
Cow position:
Alignm length: 360
Alignm identity: 249
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 33, 86

Conread position: 2-369
Cow position:
Alignm length: 392
Alignm identity: 268
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 100, 49

Conread position: 2-463
Cow position:
Alignm length: 493
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 182

Conread position: 4-183
Cow position:
Alignm length: 185
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 116

Conread position: 4-282
Cow position:
Alignm length: 297
Alignm identity: 212
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 44, 61

Conread position: 4-329
Cow position:
Alignm length: 347
Alignm identity: 235
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 27, 32

Conread position: 4-330
Cow position:
Alignm length: 349
Alignm identity: 247
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 24, 314

Conread position: 5-329
Cow position:
Alignm length: 334
Alignm identity: 220
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 29, 169

Conread position: 5-330
Cow position:
Alignm length: 342
Alignm identity: 227
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 53, 66

Conread position: 5-330
Cow position:
Alignm length: 343
Alignm identity: 240
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 133, 52

Conread position: 6-158
Cow position:
Alignm length: 155
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 132, 52

Conread position: 6-286
Cow position:
Alignm length: 291
Alignm identity: 211
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 118, 52

Conread position: 6-327
Cow position:
Alignm length: 356
Alignm identity: 244
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 28, 203

Conread position: 6-330
Cow position:
Alignm length: 333
Alignm identity: 218
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 23, 52

Conread position: 10-327
Cow position:
Alignm length: 354
Alignm identity: 250
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 50, 0

Conread position: 25-318
Cow position:
Alignm length: 311
Alignm identity: 208
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 92, 35

Conread position: 27-342
Cow position:
Alignm length: 333
Alignm identity: 229
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 31, 245

Conread position: 39-330
Cow position:
Alignm length: 306
Alignm identity: 210
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 66

Conread position: 58-327
Cow position:
Alignm length: 281
Alignm identity: 191
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 102, 90

Conread position: 135-304
Cow position:
Alignm length: 180
Alignm identity: 141
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 69, 52

Conread position: 135-327
Cow position:
Alignm length: 198
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 69, 33

Conread position: 135-329
Cow position:
Alignm length: 202
Alignm identity: 152
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 69, 40

Conread position: 135-329
Cow position:
Alignm length: 210
Alignm identity: 157
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 135-332
Cow position:
Alignm length: 203
Alignm identity: 144
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 69, 113

Conread position: 135-333
Cow position:
Alignm length: 205
Alignm identity: 148
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 69, 30

Conread position: 135-338
Cow position:
Alignm length: 217
Alignm identity: 159
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 69, 39

Conread position: 135-338
Cow position:
Alignm length: 217
Alignm identity: 165
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 69, 41

Conread position: 135-339
Cow position:
Alignm length: 215
Alignm identity: 161
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 47, 74

Conread position: 135-362
Cow position:
Alignm length: 243
Alignm identity: 175
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 69, 52

Conread position: 138-320
Cow position:
Alignm length: 192
Alignm identity: 142
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 66, 48

Conread position: 139-330
Cow position:
Alignm length: 200
Alignm identity: 146
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 56, 28

Conread position: 139-330
Cow position:
Alignm length: 195
Alignm identity: 148
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 43, 28

Conread position: 140-298
Cow position:
Alignm length: 163
Alignm identity: 125
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 99, 25

Conread position: 140-330
Cow position:
Alignm length: 198
Alignm identity: 148
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 42, 27

Conread position: 144-330
Cow position:
Alignm length: 197
Alignm identity: 146
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 24, 140

Conread position: 146-352
Cow position:
Alignm length: 216
Alignm identity: 150
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 21

Show alignments to all cow chromosomes.