Cow genome map


           Conread name:
           rtra01_e11r1.y1
        

               Conread position:
               1-132
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               1-164
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               54, 103
               

               Conread position:
               1-184
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               137, 56
               

               Conread position:
               1-198
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               137, 43
               

               Conread position:
               1-256
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               192
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               22, 17
               

               Conread position:
               1-262
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               136, 59
               

               Conread position:
               1-286
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               137, 45
               

               Conread position:
               1-319
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 78
               

               Conread position:
               1-319
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               246
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               113, 53
               

               Conread position:
               1-319
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               137, 54
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               111, 16
               

               Conread position:
               1-324
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               255
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               30, 62
               

               Conread position:
               1-327
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               51, 126
               

               Conread position:
               1-338
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               263
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               45, 55
               

               Conread position:
               1-339
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 114
               

               Conread position:
               1-340
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               18, 60
               

               Conread position:
               1-350
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               260
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               59, 30
               

               Conread position:
               1-372
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               261
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               57, 96
               

               Conread position:
               2-240
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               34, 18
               

               Conread position:
               2-319
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               242
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               78, 8
               

               Conread position:
               2-330
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               3-303
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               242
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               57, 102
               

               Conread position:
               3-316
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               15, 205
               

               Conread position:
               4-253
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               54, 96
               

               Conread position:
               4-325
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               132, 45
               

               Conread position:
               6-339
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               132, 34
               

               Conread position:
               9-235
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               10-317
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               48, 82
               

               Conread position:
               10-319
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               24, 12
               

               Conread position:
               10-350
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               259
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               129, 50
               

               Conread position:
               11-240
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               178, 32
               

               Conread position:
               13-327
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               230
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               87, 58
               

               Conread position:
               24-232
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               24-300
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               38, 176
               

               Conread position:
               26-313
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               214
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               105, 30
               

               Conread position:
               28-330
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               28-344
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               87, 27
               

               Conread position:
               29-333
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               7, 83
               

               Conread position:
               40-269
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               98, 20
               

               Conread position:
               44-327
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               13, 77
               

               Conread position:
               46-330
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               56, 156
               

               Conread position:
               47-302
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               91, 52
               

               Conread position:
               53-342
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               10, 305
               

               Conread position:
               58-240
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               135-318
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               106, 46
               

               Conread position:
               135-319
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               15, 57
               

               Conread position:
               135-325
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               47, 32
               

               Conread position:
               135-330
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               69, 52
               

               Conread position:
               135-330
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               47, 28
               

               Conread position:
               135-332
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               69, 32
               

               Conread position:
               135-338
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               69, 29
               

               Conread position:
               135-338
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               68, 31
               

               Conread position:
               135-338
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               96, 46
               

               Conread position:
               135-353
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               69, 12
               

               Conread position:
               138-317
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               66, 49
               

               Conread position:
               139-322
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               65, 49
               

               Conread position:
               139-330
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               65, 28
               

               Conread position:
               139-333
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               65, 28
               

               Conread position:
               140-312
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               64, 27
               

               Conread position:
               140-319
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               140-330
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               63, 24
               

               Conread position:
               145-330
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               59, 22
               

               Conread position:
               152-330
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               52, 36
               
Show alignments to all cow chromosomes.