Cow genome map
| Conread name: | rtra01_e11r1.y1 |
| Conread position: | 1-186 |
| Cow position: | chr25:26457588-26457778 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-297 |
| Cow position: | chr25:17365178-17365487 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 29, 64 |
| Conread position: | 1-317 |
| Cow position: | chr25:14467004-14467335 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 59 |
| Conread position: | 1-329 |
| Cow position: | chr25:34970552-34970214 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 32, 61 |
| Conread position: | 1-330 |
| Cow position: | chr25:20624846-20625195 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 258 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 106, 59 |
| Conread position: | 1-333 |
| Cow position: | chr25:37469828-37469509 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 137, 51 |
| Conread position: | 1-338 |
| Cow position: | chr25:10748411-10748776 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 269 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 57, 73 |
| Conread position: | 1-339 |
| Cow position: | chr25:18000441-18000790 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 250 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 59, 94 |
| Conread position: | 2-198 |
| Cow position: | chr25:15368782-15368587 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 136, 22 |
| Conread position: | 2-330 |
| Cow position: | chr25:17701905-17702229 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 241 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 32, 45 |
| Conread position: | 2-330 |
| Cow position: | chr25:20496627-20496274 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 32, 223 |
| Conread position: | 3-311 |
| Cow position: | chr25:28012562-28012864 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 13, 95 |
| Conread position: | 3-329 |
| Cow position: | chr25:10011971-10012314 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 252 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 55, 94 |
| Conread position: | 4-338 |
| Cow position: | chr25:12234689-12235032 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 96, 32 |
| Conread position: | 5-329 |
| Cow position: | chr25:18448898-18448572 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 17 |
| Conread position: | 5-333 |
| Cow position: | chr25:9349198-9349526 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 29, 19 |
| Conread position: | 6-327 |
| Cow position: | chr25:22909772-22910107 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 115 |
| Conread position: | 10-319 |
| Cow position: | chr25:24136360-24136690 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 26, 51 |
| Conread position: | 10-330 |
| Cow position: | chr25:40956904-40957252 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 195 |
| Conread position: | 11-312 |
| Cow position: | chr25:22736194-22735875 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 117, 47 |
| Conread position: | 23-327 |
| Cow position: | chr25:18206252-18206562 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 33, 12 |
| Conread position: | 24-330 |
| Cow position: | chr25:27504131-27504451 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 36, 67 |
| Conread position: | 25-313 |
| Cow position: | chr25:22575459-22575767 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 208 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 35, 147 |
| Conread position: | 29-329 |
| Cow position: | chr25:33691619-33691289 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 40, 173 |
| Conread position: | 32-338 |
| Cow position: | chr25:13333464-13333147 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 26, 105 |
| Conread position: | 43-327 |
| Cow position: | chr25:33260779-33260477 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 219 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 15, 138 |
| Conread position: | 135-317 |
| Cow position: | chr25:395287-395102 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 69, 42 |
| Conread position: | 135-338 |
| Cow position: | chr25:1735379-1735586 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 69, 28 |
| Conread position: | 135-338 |
| Cow position: | chr25:12239213-12239413 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 68, 46 |
| Conread position: | 140-297 |
| Cow position: | chr25:10218118-10218281 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 64, 24 |
| Conread position: | 140-330 |
| Cow position: | chr25:6464102-6464295 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 64, 27 |
Show alignments to all cow chromosomes.