Cow genome map


           Conread name:
           rtra01_e11r1.y1
        

               Conread position:
               1-121
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               53, 112
               

               Conread position:
               1-132
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               1-171
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               59, 150
               

               Conread position:
               1-194
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               137, 59
               

               Conread position:
               1-205
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               33, 57
               

               Conread position:
               1-240
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               50, 112
               

               Conread position:
               1-272
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               1-295
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               50, 197
               

               Conread position:
               1-302
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               228
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               109, 30
               

               Conread position:
               1-303
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               225
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               32, 217
               

               Conread position:
               1-322
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               137, 16
               

               Conread position:
               1-324
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               99, 59
               

               Conread position:
               1-327
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               59, 12
               

               Conread position:
               1-327
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 180
               

               Conread position:
               1-338
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               264
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               137, 58
               

               Conread position:
               1-339
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               234
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               25, 112
               

               Conread position:
               1-339
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 51
               

               Conread position:
               2-137
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               58, 33
               

               Conread position:
               2-318
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               238
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               2-325
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               2-327
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               71, 112
               

               Conread position:
               2-330
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 11
               

               Conread position:
               4-276
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               204
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               30, 112
               

               Conread position:
               4-330
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 176
               

               Conread position:
               8-338
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               231
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               25, 12
               

               Conread position:
               9-333
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               96, 29
               

               Conread position:
               10-193
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               97, 50
               

               Conread position:
               12-326
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               70, 48
               

               Conread position:
               24-319
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               33, 91
               

               Conread position:
               24-330
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 32
               

               Conread position:
               26-319
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               16, 81
               

               Conread position:
               26-319
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               219
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               32, 173
               

               Conread position:
               32-330
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               25, 66
               

               Conread position:
               42-342
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               96, 18
               

               Conread position:
               135-308
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               69, 46
               

               Conread position:
               135-324
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               69, 46
               

               Conread position:
               135-327
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               69, 46
               

               Conread position:
               135-327
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               49, 35
               

               Conread position:
               135-327
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               69, 40
               

               Conread position:
               135-328
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               155
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               68, 46
               

               Conread position:
               135-329
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               68, 41
               

               Conread position:
               135-330
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               69, 46
               

               Conread position:
               135-330
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               50, 180
               

               Conread position:
               135-330
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               69, 30
               

               Conread position:
               135-330
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               28, 54
               

               Conread position:
               135-338
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               69, 38
               

               Conread position:
               139-330
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               64, 28
               

               Conread position:
               139-353
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               64, 25
               

               Conread position:
               145-341
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               59, 22
               

               Conread position:
               152-296
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               175-331
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               13, 0
               
Show alignments to all cow chromosomes.