Cow genome map


           Conread name:
           rtra01_e11r1.y1
        

               Conread position:
               1-132
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               1-135
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               1-191
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               31, 112
               

               Conread position:
               1-194
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               137, 59
               

               Conread position:
               1-237
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               57, 107
               

               Conread position:
               1-250
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               59, 80
               

               Conread position:
               1-260
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               79, 59
               

               Conread position:
               1-302
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               57, 207
               

               Conread position:
               1-308
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               233
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               53, 73
               

               Conread position:
               1-316
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               33, 228
               

               Conread position:
               1-317
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               59, 43
               

               Conread position:
               1-319
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               73, 25
               

               Conread position:
               1-327
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               242
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               129, 59
               

               Conread position:
               1-329
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               230
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               18, 108
               

               Conread position:
               1-330
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               244
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               116, 54
               

               Conread position:
               1-330
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               1-335
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               255
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               53, 30
               

               Conread position:
               1-342
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               250
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               32, 49
               

               Conread position:
               1-350
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               18, 108
               

               Conread position:
               2-160
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               2-314
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               243
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               17, 79
               

               Conread position:
               2-315
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               230
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               35, 268
               

               Conread position:
               2-319
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               247
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               2-320
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 297
               

               Conread position:
               2-327
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               17, 220
               

               Conread position:
               2-327
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 147
               

               Conread position:
               2-329
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               240
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               33, 76
               

               Conread position:
               3-339
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               57, 29
               

               Conread position:
               4-304
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               29, 9
               

               Conread position:
               4-327
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               254
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               56, 29
               

               Conread position:
               4-338
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               265
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               134, 39
               

               Conread position:
               5-314
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               73, 53
               

               Conread position:
               5-330
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               5-330
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               234
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               30, 63
               

               Conread position:
               5-338
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               52, 75
               

               Conread position:
               5-342
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               257
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               128, 54
               

               Conread position:
               6-319
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               224
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               54, 108
               

               Conread position:
               10-191
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               48, 90
               

               Conread position:
               10-327
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               231
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               121, 45
               

               Conread position:
               10-330
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               231
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               128, 50
               

               Conread position:
               12-313
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               15, 45
               

               Conread position:
               14-327
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               26, 10
               

               Conread position:
               25-330
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               40, 84
               

               Conread position:
               25-338
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               37, 59
               

               Conread position:
               32-247
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               82, 28
               

               Conread position:
               44-319
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               126, 10
               

               Conread position:
               87-307
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               39, 24
               

               Conread position:
               118-385
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               191
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               134-327
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               85, 70
               

               Conread position:
               135-278
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               69, 46
               

               Conread position:
               135-298
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               96, 39
               

               Conread position:
               135-302
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               69, 46
               

               Conread position:
               135-302
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               69, 42
               

               Conread position:
               135-319
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               69, 36
               

               Conread position:
               135-325
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               69, 31
               

               Conread position:
               135-325
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               68, 46
               

               Conread position:
               135-327
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               69, 46
               

               Conread position:
               135-330
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               56, 32
               

               Conread position:
               135-330
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               69, 42
               

               Conread position:
               135-330
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               70, 45
               

               Conread position:
               135-330
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               46, 105
               

               Conread position:
               135-330
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               135-330
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               50, 135
               

               Conread position:
               135-332
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               67, 54
               

               Conread position:
               135-342
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               69, 5
               

               Conread position:
               136-327
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               97, 45
               

               Conread position:
               136-339
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               68, 41
               

               Conread position:
               137-330
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               67, 44
               

               Conread position:
               138-325
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               98, 43
               

               Conread position:
               138-353
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               66, 28
               

               Conread position:
               140-330
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               97, 18
               

               Conread position:
               140-330
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               64, 23
               

               Conread position:
               140-330
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               63, 28
               

               Conread position:
               140-330
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               64, 24
               

               Conread position:
               140-330
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               64, 28
               

               Conread position:
               140-350
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               64, 27
               

               Conread position:
               140-470
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               63, 41
               

               Conread position:
               143-302
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               60, 38
               

               Conread position:
               175-309
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               13, 35
               

               Conread position:
               183-330
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               12, 65
               
Show alignments to all cow chromosomes.