Cow genome map

Conread name: rtra01_e11r1.y1

Conread position: 1-137
Cow position:
Alignm length: 137
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 1-153
Cow position:
Alignm length: 154
Alignm identity: 111
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 132, 59

Conread position: 1-178
Cow position:
Alignm length: 182
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 61, 118

Conread position: 1-184
Cow position:
Alignm length: 190
Alignm identity: 136
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 57, 180

Conread position: 1-191
Cow position:
Alignm length: 196
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 136, 57

Conread position: 1-193
Cow position:
Alignm length: 196
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 129, 59

Conread position: 1-193
Cow position:
Alignm length: 207
Alignm identity: 150
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 99, 30

Conread position: 1-198
Cow position:
Alignm length: 201
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 137, 50

Conread position: 1-224
Cow position:
Alignm length: 230
Alignm identity: 156
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 16

Conread position: 1-236
Cow position:
Alignm length: 246
Alignm identity: 180
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 66, 59

Conread position: 1-301
Cow position:
Alignm length: 320
Alignm identity: 232
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 137, 112

Conread position: 1-302
Cow position:
Alignm length: 324
Alignm identity: 229
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 89, 57

Conread position: 1-302
Cow position:
Alignm length: 304
Alignm identity: 211
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 203, 59

Conread position: 1-302
Cow position:
Alignm length: 322
Alignm identity: 225
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 61, 0

Conread position: 1-302
Cow position:
Alignm length: 329
Alignm identity: 227
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 120, 59

Conread position: 1-309
Cow position:
Alignm length: 320
Alignm identity: 226
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 203, 46

Conread position: 1-322
Cow position:
Alignm length: 351
Alignm identity: 243
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 138, 59

Conread position: 1-325
Cow position:
Alignm length: 355
Alignm identity: 253
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 33, 221

Conread position: 1-326
Cow position:
Alignm length: 345
Alignm identity: 249
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 58, 93

Conread position: 1-326
Cow position:
Alignm length: 343
Alignm identity: 232
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 34, 173

Conread position: 1-327
Cow position:
Alignm length: 348
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 59

Conread position: 1-327
Cow position:
Alignm length: 344
Alignm identity: 230
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 130, 9

Conread position: 1-327
Cow position:
Alignm length: 332
Alignm identity: 236
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 302, 59

Conread position: 1-328
Cow position:
Alignm length: 355
Alignm identity: 246
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 61, 192

Conread position: 1-329
Cow position:
Alignm length: 356
Alignm identity: 248
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 106, 59

Conread position: 1-329
Cow position:
Alignm length: 354
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 1-330
Cow position:
Alignm length: 358
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 47

Conread position: 1-330
Cow position:
Alignm length: 347
Alignm identity: 240
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 54, 81

Conread position: 1-330
Cow position:
Alignm length: 348
Alignm identity: 249
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 59, 119

Conread position: 1-330
Cow position:
Alignm length: 345
Alignm identity: 243
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 33, 115

Conread position: 1-330
Cow position:
Alignm length: 351
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 197

Conread position: 1-342
Cow position:
Alignm length: 356
Alignm identity: 238
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 115, 52

Conread position: 1-350
Cow position:
Alignm length: 377
Alignm identity: 255
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 33, 344

Conread position: 1-355
Cow position:
Alignm length: 389
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 59

Conread position: 2-240
Cow position:
Alignm length: 252
Alignm identity: 176
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 152

Conread position: 2-302
Cow position:
Alignm length: 334
Alignm identity: 227
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 17, 211

Conread position: 2-325
Cow position:
Alignm length: 355
Alignm identity: 252
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 17, 201

Conread position: 2-330
Cow position:
Alignm length: 366
Alignm identity: 250
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 27, 226

Conread position: 2-331
Cow position:
Alignm length: 362
Alignm identity: 244
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 227

Conread position: 2-333
Cow position:
Alignm length: 349
Alignm identity: 241
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 32, 219

Conread position: 2-333
Cow position:
Alignm length: 354
Alignm identity: 249
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 17, 37

Conread position: 2-338
Cow position:
Alignm length: 367
Alignm identity: 249
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 3-241
Cow position:
Alignm length: 244
Alignm identity: 170
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 136, 32

Conread position: 3-241
Cow position:
Alignm length: 262
Alignm identity: 185
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 237

Conread position: 3-302
Cow position:
Alignm length: 327
Alignm identity: 228
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 49, 22

Conread position: 3-328
Cow position:
Alignm length: 337
Alignm identity: 235
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 31, 119

Conread position: 4-317
Cow position:
Alignm length: 333
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 56

Conread position: 4-319
Cow position:
Alignm length: 326
Alignm identity: 216
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 237, 51

Conread position: 4-330
Cow position:
Alignm length: 345
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 178

Conread position: 5-240
Cow position:
Alignm length: 246
Alignm identity: 164
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 30, 0

Conread position: 5-317
Cow position:
Alignm length: 334
Alignm identity: 224
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 35, 30

Conread position: 5-338
Cow position:
Alignm length: 347
Alignm identity: 232
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 29, 191

Conread position: 6-304
Cow position:
Alignm length: 309
Alignm identity: 216
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 28, 181

Conread position: 6-330
Cow position:
Alignm length: 340
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 55

Conread position: 6-332
Cow position:
Alignm length: 342
Alignm identity: 244
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 52, 137

Conread position: 9-325
Cow position:
Alignm length: 350
Alignm identity: 253
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 51, 299

Conread position: 10-302
Cow position:
Alignm length: 318
Alignm identity: 212
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 170

Conread position: 10-327
Cow position:
Alignm length: 341
Alignm identity: 236
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 9, 108

Conread position: 13-330
Cow position:
Alignm length: 332
Alignm identity: 228
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 49, 94

Conread position: 16-325
Cow position:
Alignm length: 323
Alignm identity: 212
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 192, 39

Conread position: 23-350
Cow position:
Alignm length: 343
Alignm identity: 235
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 11, 93

Conread position: 26-198
Cow position:
Alignm length: 178
Alignm identity: 126
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 36, 89

Conread position: 26-330
Cow position:
Alignm length: 319
Alignm identity: 221
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 31, 286

Conread position: 31-330
Cow position:
Alignm length: 321
Alignm identity: 211
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 84

Conread position: 40-327
Cow position:
Alignm length: 322
Alignm identity: 224
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 182

Conread position: 60-295
Cow position:
Alignm length: 259
Alignm identity: 185
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 21, 15

Conread position: 61-353
Cow position:
Alignm length: 315
Alignm identity: 216
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 68, 126

Conread position: 79-330
Cow position:
Alignm length: 267
Alignm identity: 189
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 59, 136

Conread position: 99-327
Cow position:
Alignm length: 241
Alignm identity: 169
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 90, 11

Conread position: 111-330
Cow position:
Alignm length: 234
Alignm identity: 162
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 85, 57

Conread position: 114-322
Cow position:
Alignm length: 210
Alignm identity: 151
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 173, 21

Conread position: 135-288
Cow position:
Alignm length: 166
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 69, 46

Conread position: 135-302
Cow position:
Alignm length: 169
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 153, 52

Conread position: 135-311
Cow position:
Alignm length: 188
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 69, 46

Conread position: 135-316
Cow position:
Alignm length: 194
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 69, 46

Conread position: 135-325
Cow position:
Alignm length: 198
Alignm identity: 146
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 108, 44

Conread position: 135-327
Cow position:
Alignm length: 203
Alignm identity: 153
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 69, 46

Conread position: 135-327
Cow position:
Alignm length: 209
Alignm identity: 160
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 48, 0

Conread position: 135-329
Cow position:
Alignm length: 215
Alignm identity: 162
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 69, 46

Conread position: 135-330
Cow position:
Alignm length: 209
Alignm identity: 159
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 68, 53

Conread position: 135-330
Cow position:
Alignm length: 201
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 104, 40

Conread position: 135-330
Cow position:
Alignm length: 202
Alignm identity: 150
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 69, 46

Conread position: 135-371
Cow position:
Alignm length: 243
Alignm identity: 171
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 66, 46

Conread position: 136-330
Cow position:
Alignm length: 208
Alignm identity: 152
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 67, 28

Conread position: 139-333
Cow position:
Alignm length: 201
Alignm identity: 151
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 65, 28

Conread position: 140-319
Cow position:
Alignm length: 195
Alignm identity: 158
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 64, 41

Conread position: 140-327
Cow position:
Alignm length: 195
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 99

Conread position: 140-330
Cow position:
Alignm length: 204
Alignm identity: 153
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 64, 7

Conread position: 140-331
Cow position:
Alignm length: 202
Alignm identity: 147
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 62, 8

Conread position: 140-338
Cow position:
Alignm length: 213
Alignm identity: 155
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 42, 24

Conread position: 142-338
Cow position:
Alignm length: 207
Alignm identity: 150
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 57, 46

Conread position: 172-330
Cow position:
Alignm length: 163
Alignm identity: 125
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 32, 16

Conread position: 176-333
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 0

Show alignments to all cow chromosomes.