Cow genome map
| Conread name: | rtra01_e11r1.y1 | 
| Conread position: | 1-137 | 
| Cow position: | chr6:50317913-50318045 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 1-153 | 
| Cow position: | chr6:47858418-47858267 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 132, 59 | 
| Conread position: | 1-178 | 
| Cow position: | chr6:13718895-13718715 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 61, 118 | 
| Conread position: | 1-184 | 
| Cow position: | chr6:51840410-51840223 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 57, 180 | 
| Conread position: | 1-191 | 
| Cow position: | chr6:15997086-15997279 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 136, 57 | 
| Conread position: | 1-193 | 
| Cow position: | chr6:7836046-7835854 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 129, 59 | 
| Conread position: | 1-193 | 
| Cow position: | chr6:16733546-16733343 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 99, 30 | 
| Conread position: | 1-198 | 
| Cow position: | chr6:24558010-24557815 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 137, 50 | 
| Conread position: | 1-224 | 
| Cow position: | chr6:59588276-59588501 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 24, 16 | 
| Conread position: | 1-236 | 
| Cow position: | chr6:37612237-37612004 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 66, 59 | 
| Conread position: | 1-301 | 
| Cow position: | chr6:65872019-65871705 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 137, 112 | 
| Conread position: | 1-302 | 
| Cow position: | chr6:2365981-2366301 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 89, 57 | 
| Conread position: | 1-302 | 
| Cow position: | chr6:10237465-10237178 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 203, 59 | 
| Conread position: | 1-302 | 
| Cow position: | chr6:24545745-24545424 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 1-302 | 
| Cow position: | chr6:54144434-54144108 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 120, 59 | 
| Conread position: | 1-309 | 
| Cow position: | chr6:16219934-16220229 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 203, 46 | 
| Conread position: | 1-322 | 
| Cow position: | chr6:827576-827922 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 138, 59 | 
| Conread position: | 1-325 | 
| Cow position: | chr6:48572748-48573101 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 33, 221 | 
| Conread position: | 1-326 | 
| Cow position: | chr6:1907651-1907319 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 58, 93 | 
| Conread position: | 1-326 | 
| Cow position: | chr6:10254357-10254022 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 34, 173 | 
| Conread position: | 1-327 | 
| Cow position: | chr6:6596703-6596361 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 103, 59 | 
| Conread position: | 1-327 | 
| Cow position: | chr6:6994827-6995165 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 130, 9 | 
| Conread position: | 1-327 | 
| Cow position: | chr6:38894981-38895296 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 302, 59 | 
| Conread position: | 1-328 | 
| Cow position: | chr6:24649976-24649626 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 61, 192 | 
| Conread position: | 1-329 | 
| Cow position: | chr6:47326941-47327291 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 106, 59 | 
| Conread position: | 1-329 | 
| Cow position: | chr6:56376217-56376570 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 1-330 | 
| Cow position: | chr6:6943549-6943904 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 47 | 
| Conread position: | 1-330 | 
| Cow position: | chr6:28278808-28278466 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 54, 81 | 
| Conread position: | 1-330 | 
| Cow position: | chr6:38018393-38018050 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 59, 119 | 
| Conread position: | 1-330 | 
| Cow position: | chr6:51387881-51387541 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 33, 115 | 
| Conread position: | 1-330 | 
| Cow position: | chr6:57118810-57119152 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 197 | 
| Conread position: | 1-342 | 
| Cow position: | chr6:37054116-37053780 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 115, 52 | 
| Conread position: | 1-350 | 
| Cow position: | chr6:36652554-36652179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 377 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 33, 344 | 
| Conread position: | 1-355 | 
| Cow position: | chr6:24223027-24223409 (view UCSC Genome Browser custom track) | 
| Alignm length: | 389 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 112, 59 | 
| Conread position: | 2-240 | 
| Cow position: | chr6:50822361-50822112 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 24, 152 | 
| Conread position: | 2-302 | 
| Cow position: | chr6:11159872-11160202 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 17, 211 | 
| Conread position: | 2-325 | 
| Cow position: | chr6:55935846-55936195 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 17, 201 | 
| Conread position: | 2-330 | 
| Cow position: | chr6:63197032-63197395 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 27, 226 | 
| Conread position: | 2-331 | 
| Cow position: | chr6:60930765-60931125 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 17, 227 | 
| Conread position: | 2-333 | 
| Cow position: | chr6:16675940-16675595 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 32, 219 | 
| Conread position: | 2-333 | 
| Cow position: | chr6:57686281-57685932 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 17, 37 | 
| Conread position: | 2-338 | 
| Cow position: | chr6:16626080-16625714 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 32, 0 | 
| Conread position: | 3-241 | 
| Cow position: | chr6:32412510-32412739 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 136, 32 | 
| Conread position: | 3-241 | 
| Cow position: | chr6:53673993-53673736 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 55, 237 | 
| Conread position: | 3-302 | 
| Cow position: | chr6:12652334-12652013 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 49, 22 | 
| Conread position: | 3-328 | 
| Cow position: | chr6:21535169-21534837 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 31, 119 | 
| Conread position: | 4-317 | 
| Cow position: | chr6:50270983-50271305 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 56 | 
| Conread position: | 4-319 | 
| Cow position: | chr6:62345755-62346062 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 237, 51 | 
| Conread position: | 4-330 | 
| Cow position: | chr6:2582988-2582651 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 178 | 
| Conread position: | 5-240 | 
| Cow position: | chr6:26450440-26450195 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 5-317 | 
| Cow position: | chr6:23532782-23532452 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 35, 30 | 
| Conread position: | 5-338 | 
| Cow position: | chr6:5302292-5302636 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 29, 191 | 
| Conread position: | 6-304 | 
| Cow position: | chr6:28079787-28080092 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 28, 181 | 
| Conread position: | 6-330 | 
| Cow position: | chr6:52002482-52002145 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 132, 55 | 
| Conread position: | 6-332 | 
| Cow position: | chr6:20255284-20255614 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 52, 137 | 
| Conread position: | 9-325 | 
| Cow position: | chr6:35415392-35415740 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 51, 299 | 
| Conread position: | 10-302 | 
| Cow position: | chr6:7989292-7989606 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 19, 170 | 
| Conread position: | 10-327 | 
| Cow position: | chr6:6701151-6701489 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 9, 108 | 
| Conread position: | 13-330 | 
| Cow position: | chr6:11789508-11789178 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 49, 94 | 
| Conread position: | 16-325 | 
| Cow position: | chr6:10484830-10485139 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 192, 39 | 
| Conread position: | 23-350 | 
| Cow position: | chr6:54140907-54140569 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 11, 93 | 
| Conread position: | 26-198 | 
| Cow position: | chr6:59633243-59633067 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 36, 89 | 
| Conread position: | 26-330 | 
| Cow position: | chr6:34549508-34549191 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 31, 286 | 
| Conread position: | 31-330 | 
| Cow position: | chr6:11169802-11169484 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 17, 84 | 
| Conread position: | 40-327 | 
| Cow position: | chr6:58594011-58594330 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 18, 182 | 
| Conread position: | 60-295 | 
| Cow position: | chr6:57680366-57680621 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 21, 15 | 
| Conread position: | 61-353 | 
| Cow position: | chr6:50800346-50800652 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 68, 126 | 
| Conread position: | 79-330 | 
| Cow position: | chr6:23986694-23986958 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 59, 136 | 
| Conread position: | 99-327 | 
| Cow position: | chr6:42840180-42839945 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 90, 11 | 
| Conread position: | 111-330 | 
| Cow position: | chr6:9375366-9375598 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 85, 57 | 
| Conread position: | 114-322 | 
| Cow position: | chr6:11382983-11383181 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 173, 21 | 
| Conread position: | 135-288 | 
| Cow position: | chr6:12964431-12964269 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 69, 46 | 
| Conread position: | 135-302 | 
| Cow position: | chr6:6367693-6367854 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 153, 52 | 
| Conread position: | 135-311 | 
| Cow position: | chr6:15782545-15782730 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 69, 46 | 
| Conread position: | 135-316 | 
| Cow position: | chr6:44377245-44377056 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 69, 46 | 
| Conread position: | 135-325 | 
| Cow position: | chr6:22863432-22863619 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 108, 44 | 
| Conread position: | 135-327 | 
| Cow position: | chr6:20172199-20172000 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 69, 46 | 
| Conread position: | 135-327 | 
| Cow position: | chr6:51191802-51191594 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 135-329 | 
| Cow position: | chr6:7173776-7173987 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 69, 46 | 
| Conread position: | 135-330 | 
| Cow position: | chr6:30128343-30128549 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 68, 53 | 
| Conread position: | 135-330 | 
| Cow position: | chr6:33851821-33852007 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 104, 40 | 
| Conread position: | 135-330 | 
| Cow position: | chr6:47624986-47625183 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 69, 46 | 
| Conread position: | 135-371 | 
| Cow position: | chr6:58316023-58315787 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 66, 46 | 
| Conread position: | 136-330 | 
| Cow position: | chr6:24781581-24781787 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 67, 28 | 
| Conread position: | 139-333 | 
| Cow position: | chr6:45160322-45160518 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 65, 28 | 
| Conread position: | 140-319 | 
| Cow position: | chr6:55366345-55366536 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 64, 41 | 
| Conread position: | 140-327 | 
| Cow position: | chr6:66433919-66433727 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 25, 99 | 
| Conread position: | 140-330 | 
| Cow position: | chr6:42961390-42961591 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 64, 7 | 
| Conread position: | 140-331 | 
| Cow position: | chr6:48281969-48281770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 62, 8 | 
| Conread position: | 140-338 | 
| Cow position: | chr6:61515220-61515431 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 42, 24 | 
| Conread position: | 142-338 | 
| Cow position: | chr6:64427162-64426957 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 57, 46 | 
| Conread position: | 172-330 | 
| Cow position: | chr6:12845252-12845093 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 32, 16 | 
| Conread position: | 176-333 | 
| Cow position: | chr6:34204202-34204033 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 9, 0 | 
Show alignments to all cow chromosomes.
