Cow genome map


           Conread name:
           rtra01_e11r1.y1
        

               Conread position:
               1-152
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               136, 57
               

               Conread position:
               1-157
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1-184
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               57, 95
               

               Conread position:
               1-198
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               137, 160
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               57, 115
               

               Conread position:
               1-267
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               21, 201
               

               Conread position:
               1-269
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               57, 114
               

               Conread position:
               1-283
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               218
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               31, 230
               

               Conread position:
               1-284
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               63, 114
               

               Conread position:
               1-289
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               128, 59
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               229
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               57, 74
               

               Conread position:
               1-319
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 57
               

               Conread position:
               1-325
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 93
               

               Conread position:
               1-327
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 59
               

               Conread position:
               1-328
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               233
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               99, 53
               

               Conread position:
               1-329
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 19
               

               Conread position:
               1-330
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               255
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               1-330
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               248
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               110, 37
               

               Conread position:
               1-330
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               59, 114
               

               Conread position:
               1-330
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               250
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               33, 9
               

               Conread position:
               1-338
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 116
               

               Conread position:
               2-232
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               32, 120
               

               Conread position:
               2-242
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               56, 17
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               58, 72
               

               Conread position:
               2-273
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               24, 172
               

               Conread position:
               2-302
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               239
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               96, 54
               

               Conread position:
               2-330
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 113
               

               Conread position:
               2-330
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               231
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               2-332
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               224
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               16, 133
               

               Conread position:
               2-338
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               251
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               153, 58
               

               Conread position:
               2-422
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               304
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               55, 353
               

               Conread position:
               3-319
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               251
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               57, 32
               

               Conread position:
               3-330
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               31, 212
               

               Conread position:
               3-332
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               26, 150
               

               Conread position:
               4-194
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               127, 56
               

               Conread position:
               4-198
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               132, 56
               

               Conread position:
               5-310
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               29, 113
               

               Conread position:
               5-324
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               251
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               39, 201
               

               Conread position:
               5-330
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               29, 19
               

               Conread position:
               5-360
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               101, 18
               

               Conread position:
               6-319
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               256
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               6-330
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               129, 54
               

               Conread position:
               6-330
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               28, 169
               

               Conread position:
               7-327
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 279
               

               Conread position:
               7-328
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               243
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               27, 175
               

               Conread position:
               8-330
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               10-319
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               237
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               50, 104
               

               Conread position:
               10-330
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               234
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               194, 45
               

               Conread position:
               10-338
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               249
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               10-339
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               247
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               24, 112
               

               Conread position:
               17-303
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               225, 42
               

               Conread position:
               27-329
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               31, 147
               

               Conread position:
               31-333
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               67, 7
               

               Conread position:
               45-319
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               46-318
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               52, 14
               

               Conread position:
               59-321
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               69, 193
               

               Conread position:
               59-330
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               85, 250
               

               Conread position:
               73-325
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               86-330
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               36, 82
               

               Conread position:
               135-291
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               63, 46
               

               Conread position:
               135-319
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               69, 46
               

               Conread position:
               135-320
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               70, 40
               

               Conread position:
               135-327
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               40, 177
               

               Conread position:
               135-327
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               69, 46
               

               Conread position:
               135-330
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               87, 32
               

               Conread position:
               135-330
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               69, 46
               

               Conread position:
               135-330
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               69, 32
               

               Conread position:
               135-332
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               50, 65
               

               Conread position:
               135-332
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               38, 54
               

               Conread position:
               135-343
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               69, 31
               

               Conread position:
               135-352
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               176
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               69, 46
               

               Conread position:
               138-330
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               93, 27
               

               Conread position:
               139-296
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               65, 28
               

               Conread position:
               139-323
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               104, 24
               

               Conread position:
               140-329
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               64, 24
               

               Conread position:
               140-330
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               64, 24
               

               Conread position:
               140-338
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               64, 24
               

               Conread position:
               146-338
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               58, 10
               

               Conread position:
               180-330
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               55, 0
               
Show alignments to all cow chromosomes.