Cow genome map
Conread name: | rtra01_e11r1.y1 |
Conread position: | 1-131 |
Cow position: | chr9:64007944-64007816 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 99 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 1-178 |
Cow position: | chr9:49651665-49651840 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 132 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 137, 21 |
Conread position: | 1-181 |
Cow position: | chr9:15033846-15034024 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 129 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 137, 48 |
Conread position: | 1-191 |
Cow position: | chr9:41957744-41957934 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 140 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 137, 58 |
Conread position: | 1-204 |
Cow position: | chr9:21462928-21462730 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 144 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 175, 59 |
Conread position: | 1-237 |
Cow position: | chr9:49985899-49986134 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 184 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 116, 57 |
Conread position: | 1-250 |
Cow position: | chr9:42037590-42037857 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 188 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 61, 157 |
Conread position: | 1-251 |
Cow position: | chr9:9315243-9315511 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 192 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 24, 120 |
Conread position: | 1-257 |
Cow position: | chr9:25468993-25469248 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 197 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 100, 16 |
Conread position: | 1-261 |
Cow position: | chr9:34204067-34204331 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 186 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 57, 112 |
Conread position: | 1-269 |
Cow position: | chr9:49847144-49847422 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 210 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 57, 142 |
Conread position: | 1-281 |
Cow position: | chr9:15006812-15006511 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 216 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 128, 59 |
Conread position: | 1-301 |
Cow position: | chr9:44552684-44553008 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 120 |
Conread position: | 1-310 |
Cow position: | chr9:8657493-8657164 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 222 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 1-319 |
Cow position: | chr9:32266450-32266113 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 232 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 57, 285 |
Conread position: | 1-319 |
Cow position: | chr9:54924557-54924908 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 25 |
Conread position: | 1-323 |
Cow position: | chr9:32624945-32625284 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 248 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 57, 197 |
Conread position: | 1-325 |
Cow position: | chr9:8599544-8599891 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 244 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 33, 84 |
Conread position: | 1-325 |
Cow position: | chr9:54206387-54206044 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 235 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 61, 110 |
Conread position: | 1-325 |
Cow position: | chr9:59924489-59924829 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 245 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 137, 9 |
Conread position: | 1-326 |
Cow position: | chr9:43911867-43912218 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 258 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 59, 20 |
Conread position: | 1-327 |
Cow position: | chr9:5059377-5059077 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 237 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 203, 48 |
Conread position: | 1-327 |
Cow position: | chr9:18093705-18093374 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 221 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 69, 43 |
Conread position: | 1-329 |
Cow position: | chr9:5485805-5486146 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 230 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 18, 137 |
Conread position: | 1-330 |
Cow position: | chr9:14184603-14184968 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 258 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 137, 57 |
Conread position: | 1-330 |
Cow position: | chr9:34309966-34310327 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 258 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 57, 176 |
Conread position: | 1-332 |
Cow position: | chr9:30477838-30477505 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 237 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 28, 195 |
Conread position: | 1-332 |
Cow position: | chr9:35708681-35708327 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 242 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 113, 59 |
Conread position: | 1-333 |
Cow position: | chr9:43037420-43037779 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 263 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 59, 196 |
Conread position: | 1-336 |
Cow position: | chr9:18110927-18110571 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 252 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 137, 30 |
Conread position: | 1-338 |
Cow position: | chr9:3959004-3959354 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 242 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 59, 120 |
Conread position: | 1-342 |
Cow position: | chr9:14960885-14961252 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 256 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 56, 360 |
Conread position: | 1-353 |
Cow position: | chr9:47925861-47926222 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 262 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 35, 107 |
Conread position: | 1-370 |
Cow position: | chr9:214523-214135 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 114 |
Conread position: | 1-389 |
Cow position: | chr9:10667086-10666670 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 286 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 68, 34 |
Conread position: | 2-300 |
Cow position: | chr9:25502593-25502278 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 217 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 17, 186 |
Conread position: | 2-329 |
Cow position: | chr9:25779289-25779628 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 235 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 17, 55 |
Conread position: | 3-301 |
Cow position: | chr9:23042717-23043036 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 223 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 31, 55 |
Conread position: | 3-329 |
Cow position: | chr9:41958847-41958503 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 186 |
Conread position: | 4-189 |
Cow position: | chr9:32817201-32817014 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 134 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 56, 158 |
Conread position: | 4-225 |
Cow position: | chr9:27292338-27292103 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 167 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 54, 86 |
Conread position: | 4-313 |
Cow position: | chr9:19382271-19382598 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 230 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 135, 56 |
Conread position: | 4-325 |
Cow position: | chr9:11201530-11201867 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 234 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 54, 248 |
Conread position: | 4-325 |
Cow position: | chr9:52633550-52633207 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 244 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 110, 54 |
Conread position: | 4-352 |
Cow position: | chr9:39428859-39428495 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 244 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 56, 255 |
Conread position: | 5-330 |
Cow position: | chr9:5327199-5327544 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 242 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 29, 58 |
Conread position: | 6-158 |
Cow position: | chr9:23943221-23943378 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 123 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 6-302 |
Cow position: | chr9:2114064-2113742 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 229 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 39, 104 |
Conread position: | 10-272 |
Cow position: | chr9:8617762-8618023 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 194 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 48, 86 |
Conread position: | 10-342 |
Cow position: | chr9:15951213-15950851 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 257 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 35, 355 |
Conread position: | 11-319 |
Cow position: | chr9:5029457-5029797 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 247 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 47, 140 |
Conread position: | 12-308 |
Cow position: | chr9:9200775-9200454 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 241 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 46, 188 |
Conread position: | 12-329 |
Cow position: | chr9:34568764-34568462 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 236 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 48, 25 |
Conread position: | 14-327 |
Cow position: | chr9:30440655-30440322 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 243 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 25, 17 |
Conread position: | 24-330 |
Cow position: | chr9:63597793-63598114 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 231 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 30, 68 |
Conread position: | 35-327 |
Cow position: | chr9:9416423-9416117 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 227 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 23, 143 |
Conread position: | 40-327 |
Cow position: | chr9:38692558-38692248 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 224 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 17, 74 |
Conread position: | 46-329 |
Cow position: | chr9:55364880-55365181 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 209 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 109, 63 |
Conread position: | 58-324 |
Cow position: | chr9:38193006-38193286 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 194 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 53, 63 |
Conread position: | 59-312 |
Cow position: | chr9:20961282-20961013 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 194 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 79, 160 |
Conread position: | 67-327 |
Cow position: | chr9:7390531-7390263 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 180 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 70, 141 |
Conread position: | 94-370 |
Cow position: | chr9:4858592-4858866 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 199 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 90, 39 |
Conread position: | 135-305 |
Cow position: | chr9:29108630-29108802 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 137 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 69, 46 |
Conread position: | 135-310 |
Cow position: | chr9:41317877-41317695 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 139 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 19, 48 |
Conread position: | 135-318 |
Cow position: | chr9:3169428-3169240 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 135 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 106, 0 |
Conread position: | 135-319 |
Cow position: | chr9:10761257-10761068 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 141 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 101, 60 |
Conread position: | 135-319 |
Cow position: | chr9:30189189-30189380 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 153 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 69, 46 |
Conread position: | 135-319 |
Cow position: | chr9:54437358-54437534 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 138 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 69, 31 |
Conread position: | 135-324 |
Cow position: | chr9:50544535-50544346 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 142 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 147, 43 |
Conread position: | 135-327 |
Cow position: | chr9:8950999-8951192 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 156 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 68, 30 |
Conread position: | 135-327 |
Cow position: | chr9:27052245-27052043 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 157 |
Alignm E-value: | 9e-32 |
Alignm gaps (pig, cow): | 68, 42 |
Conread position: | 135-330 |
Cow position: | chr9:33218857-33218659 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 146 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 69, 17 |
Conread position: | 135-330 |
Cow position: | chr9:34762755-34762560 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 153 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 69, 11 |
Conread position: | 135-330 |
Cow position: | chr9:39152586-39152394 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 149 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 69, 40 |
Conread position: | 135-330 |
Cow position: | chr9:64454029-64453830 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 155 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 104, 23 |
Conread position: | 135-335 |
Cow position: | chr9:16745768-16745974 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 164 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 69, 43 |
Conread position: | 135-336 |
Cow position: | chr9:3594438-3594226 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 165 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 69, 23 |
Conread position: | 135-337 |
Cow position: | chr9:5141172-5141375 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 154 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 69, 46 |
Conread position: | 135-480 |
Cow position: | chr9:44108737-44108387 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 148 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 107, 23 |
Conread position: | 136-327 |
Cow position: | chr9:47875861-47875658 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 152 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 140-317 |
Cow position: | chr9:18002854-18002669 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 140 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 64, 24 |
Conread position: | 140-330 |
Cow position: | chr9:5227073-5226872 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 148 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 64, 24 |
Conread position: | 140-330 |
Cow position: | chr9:19539187-19539390 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 145 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 141-330 |
Cow position: | chr9:35375526-35375714 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 144 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 95, 26 |
Conread position: | 147-339 |
Cow position: | chr9:16300464-16300273 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 142 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 18, 47 |
Conread position: | 148-325 |
Cow position: | chr9:42585520-42585338 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 139 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 56, 19 |
Show alignments to all cow chromosomes.