Cow genome map

Conread name: rtra01_e11r1.y1

Conread position: 1-153
Cow position:
Alignm length: 154
Alignm identity: 111
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 137, 59

Conread position: 1-194
Cow position:
Alignm length: 197
Alignm identity: 142
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 137, 52

Conread position: 1-198
Cow position:
Alignm length: 201
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 137, 59

Conread position: 1-205
Cow position:
Alignm length: 209
Alignm identity: 142
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 59, 112

Conread position: 1-275
Cow position:
Alignm length: 299
Alignm identity: 215
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 137, 59

Conread position: 1-298
Cow position:
Alignm length: 314
Alignm identity: 229
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 112, 59

Conread position: 1-300
Cow position:
Alignm length: 321
Alignm identity: 235
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 24, 60

Conread position: 1-317
Cow position:
Alignm length: 329
Alignm identity: 233
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 57, 113

Conread position: 1-318
Cow position:
Alignm length: 336
Alignm identity: 223
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 33, 194

Conread position: 1-319
Cow position:
Alignm length: 341
Alignm identity: 245
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 46, 23

Conread position: 1-319
Cow position:
Alignm length: 350
Alignm identity: 246
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 57, 72

Conread position: 1-321
Cow position:
Alignm length: 339
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 96

Conread position: 1-324
Cow position:
Alignm length: 340
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 1-325
Cow position:
Alignm length: 359
Alignm identity: 252
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 59, 0

Conread position: 1-327
Cow position:
Alignm length: 341
Alignm identity: 228
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 56, 114

Conread position: 1-327
Cow position:
Alignm length: 344
Alignm identity: 240
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 32, 105

Conread position: 1-327
Cow position:
Alignm length: 364
Alignm identity: 261
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 137, 58

Conread position: 1-327
Cow position:
Alignm length: 357
Alignm identity: 254
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 61, 201

Conread position: 1-327
Cow position:
Alignm length: 348
Alignm identity: 249
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 137, 59

Conread position: 1-330
Cow position:
Alignm length: 349
Alignm identity: 250
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 54, 102

Conread position: 1-330
Cow position:
Alignm length: 345
Alignm identity: 229
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 74, 59

Conread position: 1-330
Cow position:
Alignm length: 350
Alignm identity: 246
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 106, 59

Conread position: 1-330
Cow position:
Alignm length: 368
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 198

Conread position: 1-330
Cow position:
Alignm length: 363
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 211

Conread position: 1-330
Cow position:
Alignm length: 368
Alignm identity: 263
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 60, 210

Conread position: 1-332
Cow position:
Alignm length: 356
Alignm identity: 256
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 59, 33

Conread position: 1-333
Cow position:
Alignm length: 357
Alignm identity: 258
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 36, 60

Conread position: 1-343
Cow position:
Alignm length: 354
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 152

Conread position: 2-158
Cow position:
Alignm length: 162
Alignm identity: 117
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 2-327
Cow position:
Alignm length: 355
Alignm identity: 251
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 32, 196

Conread position: 2-330
Cow position:
Alignm length: 346
Alignm identity: 245
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 31, 76

Conread position: 2-338
Cow position:
Alignm length: 363
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 300

Conread position: 3-318
Cow position:
Alignm length: 329
Alignm identity: 216
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 3-333
Cow position:
Alignm length: 356
Alignm identity: 252
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 29, 181

Conread position: 3-339
Cow position:
Alignm length: 362
Alignm identity: 253
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 17, 176

Conread position: 4-327
Cow position:
Alignm length: 341
Alignm identity: 234
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 25, 203

Conread position: 5-315
Cow position:
Alignm length: 326
Alignm identity: 221
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 29, 0

Conread position: 5-317
Cow position:
Alignm length: 335
Alignm identity: 239
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 53, 187

Conread position: 5-328
Cow position:
Alignm length: 348
Alignm identity: 231
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 52, 44

Conread position: 5-330
Cow position:
Alignm length: 337
Alignm identity: 219
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 29, 8

Conread position: 5-330
Cow position:
Alignm length: 346
Alignm identity: 235
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 29, 174

Conread position: 5-332
Cow position:
Alignm length: 355
Alignm identity: 245
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 32, 55

Conread position: 5-368
Cow position:
Alignm length: 400
Alignm identity: 262
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 177

Conread position: 6-330
Cow position:
Alignm length: 345
Alignm identity: 241
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 28, 197

Conread position: 6-330
Cow position:
Alignm length: 347
Alignm identity: 236
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 23, 247

Conread position: 7-333
Cow position:
Alignm length: 360
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 196

Conread position: 10-158
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 128, 50

Conread position: 10-302
Cow position:
Alignm length: 303
Alignm identity: 217
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 128, 51

Conread position: 10-323
Cow position:
Alignm length: 338
Alignm identity: 233
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 48, 0

Conread position: 10-328
Cow position:
Alignm length: 352
Alignm identity: 236
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 176

Conread position: 10-338
Cow position:
Alignm length: 357
Alignm identity: 258
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 26, 50

Conread position: 11-330
Cow position:
Alignm length: 334
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 44

Conread position: 17-294
Cow position:
Alignm length: 287
Alignm identity: 193
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 43, 73

Conread position: 19-329
Cow position:
Alignm length: 339
Alignm identity: 245
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 30, 64

Conread position: 24-330
Cow position:
Alignm length: 333
Alignm identity: 224
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 25-254
Cow position:
Alignm length: 252
Alignm identity: 181
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 37, 177

Conread position: 25-318
Cow position:
Alignm length: 313
Alignm identity: 218
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 35, 194

Conread position: 26-289
Cow position:
Alignm length: 280
Alignm identity: 206
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 32, 0

Conread position: 26-327
Cow position:
Alignm length: 328
Alignm identity: 229
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 32, 0

Conread position: 28-330
Cow position:
Alignm length: 322
Alignm identity: 212
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 115

Conread position: 28-330
Cow position:
Alignm length: 324
Alignm identity: 219
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 23, 91

Conread position: 31-330
Cow position:
Alignm length: 320
Alignm identity: 213
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 26, 80

Conread position: 32-338
Cow position:
Alignm length: 334
Alignm identity: 239
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 30, 88

Conread position: 35-330
Cow position:
Alignm length: 311
Alignm identity: 214
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 118, 23

Conread position: 40-319
Cow position:
Alignm length: 296
Alignm identity: 209
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 18, 55

Conread position: 44-329
Cow position:
Alignm length: 304
Alignm identity: 204
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 124

Conread position: 52-330
Cow position:
Alignm length: 303
Alignm identity: 215
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 62, 7

Conread position: 60-338
Cow position:
Alignm length: 296
Alignm identity: 204
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 50, 17

Conread position: 78-330
Cow position:
Alignm length: 278
Alignm identity: 191
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 93

Conread position: 107-333
Cow position:
Alignm length: 234
Alignm identity: 165
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 28, 36

Conread position: 135-298
Cow position:
Alignm length: 174
Alignm identity: 140
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 69, 46

Conread position: 135-303
Cow position:
Alignm length: 182
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 135-313
Cow position:
Alignm length: 183
Alignm identity: 145
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 69, 46

Conread position: 135-318
Cow position:
Alignm length: 194
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 135-327
Cow position:
Alignm length: 203
Alignm identity: 141
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 85, 53

Conread position: 135-327
Cow position:
Alignm length: 197
Alignm identity: 148
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 69, 46

Conread position: 135-329
Cow position:
Alignm length: 197
Alignm identity: 145
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 69, 32

Conread position: 135-330
Cow position:
Alignm length: 205
Alignm identity: 147
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 69, 29

Conread position: 135-330
Cow position:
Alignm length: 208
Alignm identity: 156
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 69, 32

Conread position: 135-338
Cow position:
Alignm length: 216
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 69, 40

Conread position: 135-338
Cow position:
Alignm length: 217
Alignm identity: 156
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 46

Conread position: 135-342
Cow position:
Alignm length: 222
Alignm identity: 168
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 98, 50

Conread position: 135-385
Cow position:
Alignm length: 258
Alignm identity: 179
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 104, 46

Conread position: 136-265
Cow position:
Alignm length: 135
Alignm identity: 112
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 67, 51

Conread position: 136-276
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 68, 30

Conread position: 136-329
Cow position:
Alignm length: 199
Alignm identity: 157
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 68, 45

Conread position: 136-330
Cow position:
Alignm length: 201
Alignm identity: 151
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 68, 34

Conread position: 138-300
Cow position:
Alignm length: 165
Alignm identity: 122
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 98, 32

Conread position: 138-330
Cow position:
Alignm length: 202
Alignm identity: 145
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 57, 123

Conread position: 138-335
Cow position:
Alignm length: 205
Alignm identity: 153
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 66, 43

Conread position: 139-324
Cow position:
Alignm length: 200
Alignm identity: 150
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 10, 0

Conread position: 139-339
Cow position:
Alignm length: 221
Alignm identity: 163
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 38, 19

Conread position: 140-321
Cow position:
Alignm length: 191
Alignm identity: 142
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 64, 24

Conread position: 141-333
Cow position:
Alignm length: 207
Alignm identity: 150
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 63, 26

Conread position: 141-338
Cow position:
Alignm length: 206
Alignm identity: 155
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 43, 34

Conread position: 189-376
Cow position:
Alignm length: 196
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 163

Show alignments to all cow chromosomes.