Cow genome map
| Conread name: | rtra01_i24r1.y1 |
| Conread position: | 1-140 |
| Cow position: | chr1:13437667-13437522 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-140 |
| Cow position: | chr1:21224522-21224378 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 1-140 |
| Cow position: | chr1:22216692-22216837 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 1-140 |
| Cow position: | chr1:22241523-22241667 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 1-140 |
| Cow position: | chr1:30715886-30715741 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-140 |
| Cow position: | chr1:31531081-31531223 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 1-218 |
| Cow position: | chr1:92553962-92553752 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 29, 96 |
| Conread position: | 1-219 |
| Cow position: | chr1:12802878-12803090 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 56, 146 |
| Conread position: | 1-219 |
| Cow position: | chr1:22617613-22617403 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 57, 38 |
| Conread position: | 1-219 |
| Cow position: | chr1:58171536-58171747 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 56, 147 |
| Conread position: | 1-219 |
| Cow position: | chr1:72036511-72036300 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 56, 146 |
| Conread position: | 1-219 |
| Cow position: | chr1:89090742-89090529 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 56, 147 |
| Conread position: | 1-226 |
| Cow position: | chr1:4209117-4208899 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 55, 147 |
| Conread position: | 1-226 |
| Cow position: | chr1:6212036-6212255 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 55, 148 |
| Conread position: | 1-226 |
| Cow position: | chr1:7164886-7165105 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 55, 148 |
| Conread position: | 1-226 |
| Cow position: | chr1:8556482-8556700 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 55, 147 |
| Conread position: | 1-226 |
| Cow position: | chr1:9261301-9261526 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 56, 156 |
| Conread position: | 1-226 |
| Cow position: | chr1:11289809-11289591 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 56, 142 |
| Conread position: | 1-226 |
| Cow position: | chr1:13405589-13405371 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 56, 142 |
| Conread position: | 1-226 |
| Cow position: | chr1:25552603-25552820 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 56, 147 |
| Conread position: | 1-226 |
| Cow position: | chr1:28875888-28876106 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 56, 142 |
| Conread position: | 1-226 |
| Cow position: | chr1:29365204-29365422 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 56, 147 |
| Conread position: | 1-226 |
| Cow position: | chr1:31597007-31597223 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 60, 143 |
| Conread position: | 1-226 |
| Cow position: | chr1:33364173-33363955 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 55, 147 |
| Conread position: | 1-226 |
| Cow position: | chr1:39546579-39546796 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 56, 104 |
| Conread position: | 1-226 |
| Cow position: | chr1:40681934-40681717 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 67, 146 |
| Conread position: | 1-226 |
| Cow position: | chr1:59484067-59483849 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 67, 147 |
| Conread position: | 1-226 |
| Cow position: | chr1:63045354-63045135 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 49, 148 |
| Conread position: | 1-226 |
| Cow position: | chr1:63045682-63045899 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 53, 146 |
| Conread position: | 1-226 |
| Cow position: | chr1:71559948-71559730 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 56, 145 |
| Conread position: | 1-226 |
| Cow position: | chr1:76872681-76872896 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 56, 40 |
| Conread position: | 1-226 |
| Cow position: | chr1:82921353-82921135 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 56, 6 |
| Conread position: | 1-226 |
| Cow position: | chr1:89431200-89431417 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 56, 27 |
| Conread position: | 1-226 |
| Cow position: | chr1:90973750-90973980 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 109 |
| Conread position: | 1-226 |
| Cow position: | chr1:91104839-91105056 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 56, 146 |
| Conread position: | 1-307 |
| Cow position: | chr1:34532845-34533167 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 231 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 55, 156 |
| Conread position: | 1-353 |
| Cow position: | chr1:40577735-40578106 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 147 |
| Conread position: | 1-353 |
| Cow position: | chr1:42054724-42054363 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 46 |
| Conread position: | 1-358 |
| Cow position: | chr1:58339726-58340091 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 172 |
| Conread position: | 1-358 |
| Cow position: | chr1:100451862-100451496 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 65, 23 |
| Conread position: | 1-361 |
| Cow position: | chr1:46613496-46613120 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 156 |
| Conread position: | 1-361 |
| Cow position: | chr1:56725965-56726337 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 147 |
| Conread position: | 1-361 |
| Cow position: | chr1:60341847-60342223 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 156 |
| Conread position: | 1-361 |
| Cow position: | chr1:76877829-76878204 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 46 |
| Conread position: | 1-362 |
| Cow position: | chr1:17009894-17009550 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 231 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 67, 146 |
| Conread position: | 1-362 |
| Cow position: | chr1:52335944-52335585 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 250 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 56, 105 |
| Conread position: | 1-362 |
| Cow position: | chr1:57526081-57526449 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 180 |
| Conread position: | 1-362 |
| Cow position: | chr1:63602988-63602616 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 156 |
| Conread position: | 1-362 |
| Cow position: | chr1:77747542-77747917 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 147 |
| Conread position: | 1-362 |
| Cow position: | chr1:90912626-90913002 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 210 |
| Conread position: | 1-363 |
| Cow position: | chr1:5504736-5505112 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 209 |
| Conread position: | 1-363 |
| Cow position: | chr1:7196423-7196045 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 156 |
| Conread position: | 1-363 |
| Cow position: | chr1:8745294-8745672 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 156 |
| Conread position: | 1-363 |
| Cow position: | chr1:11666766-11666388 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 156 |
| Conread position: | 1-363 |
| Cow position: | chr1:14361675-14361297 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 156 |
| Conread position: | 1-363 |
| Cow position: | chr1:17436879-17436501 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 157 |
| Conread position: | 1-363 |
| Cow position: | chr1:20648236-20648614 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 156 |
| Conread position: | 1-363 |
| Cow position: | chr1:20847209-20846839 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 193 |
| Conread position: | 1-363 |
| Cow position: | chr1:21134311-21133933 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 156 |
| Conread position: | 1-363 |
| Cow position: | chr1:21377762-21377384 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 211 |
| Conread position: | 1-363 |
| Cow position: | chr1:22222820-22223198 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 156 |
| Conread position: | 1-363 |
| Cow position: | chr1:22530002-22529634 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 156 |
| Conread position: | 1-363 |
| Cow position: | chr1:24562948-24562574 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 56, 96 |
| Conread position: | 1-363 |
| Cow position: | chr1:24572335-24571961 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 56, 96 |
| Conread position: | 1-363 |
| Cow position: | chr1:28713839-28714213 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 138 |
| Conread position: | 1-363 |
| Cow position: | chr1:30103781-30103403 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 156 |
| Conread position: | 1-363 |
| Cow position: | chr1:33854078-33854441 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 56, 147 |
| Conread position: | 1-363 |
| Cow position: | chr1:33899064-33899430 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 261 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 67, 15 |
| Conread position: | 1-363 |
| Cow position: | chr1:61096294-61096672 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 156 |
| Conread position: | 1-363 |
| Cow position: | chr1:61332165-61331788 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 96 |
| Conread position: | 1-363 |
| Cow position: | chr1:61747362-61746992 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 40 |
| Conread position: | 1-363 |
| Cow position: | chr1:67832345-67831962 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 161 |
| Conread position: | 1-363 |
| Cow position: | chr1:69769609-69769993 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 162 |
| Conread position: | 1-363 |
| Cow position: | chr1:71794333-71794707 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 152 |
| Conread position: | 1-363 |
| Cow position: | chr1:79633756-79633378 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 188 |
| Conread position: | 1-363 |
| Cow position: | chr1:82478781-82479158 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 156 |
| Conread position: | 1-363 |
| Cow position: | chr1:85794753-85795121 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 265 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 56, 156 |
| Conread position: | 1-363 |
| Cow position: | chr1:86593508-86593130 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 156 |
| Conread position: | 1-363 |
| Cow position: | chr1:86600219-86599841 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 156 |
| Conread position: | 1-363 |
| Cow position: | chr1:86704946-86705326 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 212 |
| Conread position: | 1-363 |
| Cow position: | chr1:87722891-87722513 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 156 |
| Conread position: | 1-363 |
| Cow position: | chr1:89493416-89493056 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 149 |
| Conread position: | 1-363 |
| Cow position: | chr1:91673028-91673406 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 156 |
| Conread position: | 1-363 |
| Cow position: | chr1:101131188-101130835 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 149 |
| Conread position: | 1-363 |
| Cow position: | chr1:101833203-101833571 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 147 |
| Conread position: | 1-363 |
| Cow position: | chr1:102551805-102552191 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 109 |
| Conread position: | 2-149 |
| Cow position: | chr1:55318844-55318691 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 2-225 |
| Cow position: | chr1:79454169-79453953 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 55, 146 |
| Conread position: | 2-362 |
| Cow position: | chr1:89111630-89112005 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 131 |
| Conread position: | 3-226 |
| Cow position: | chr1:16798299-16798080 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 168, 77 |
| Conread position: | 3-226 |
| Cow position: | chr1:61342913-61342697 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 54, 145 |
| Conread position: | 3-226 |
| Cow position: | chr1:102322304-102322086 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 47, 81 |
| Conread position: | 3-344 |
| Cow position: | chr1:27493774-27494119 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 245 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 54, 90 |
| Conread position: | 3-347 |
| Cow position: | chr1:34684296-34684640 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 254 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 65, 121 |
| Conread position: | 3-363 |
| Cow position: | chr1:35599006-35598636 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 154 |
| Conread position: | 3-363 |
| Cow position: | chr1:79113236-79113594 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 127, 65 |
| Conread position: | 5-226 |
| Cow position: | chr1:37677356-37677142 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 51, 143 |
| Conread position: | 7-363 |
| Cow position: | chr1:18024994-18024641 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 141 |
| Conread position: | 8-226 |
| Cow position: | chr1:83170443-83170654 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 48, 140 |
| Conread position: | 8-363 |
| Cow position: | chr1:52172006-52171634 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 149 |
| Conread position: | 17-363 |
| Cow position: | chr1:67001022-67001384 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 140 |
| Conread position: | 19-363 |
| Cow position: | chr1:73565663-73565304 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 253 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 37, 142 |
| Conread position: | 40-363 |
| Cow position: | chr1:60251591-60251252 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 117 |
| Conread position: | 43-363 |
| Cow position: | chr1:18487339-18487003 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 241 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 13, 114 |
| Conread position: | 69-363 |
| Cow position: | chr1:61340450-61340146 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 219 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 106, 82 |
| Conread position: | 69-363 |
| Cow position: | chr1:69504501-69504200 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 82 |
| Conread position: | 91-363 |
| Cow position: | chr1:24203755-24203488 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 84, 36 |
| Conread position: | 162-363 |
| Cow position: | chr1:5492088-5492300 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 162-363 |
| Cow position: | chr1:92008244-92008448 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 55, 41 |
| Conread position: | 163-363 |
| Cow position: | chr1:95474937-95474726 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 65, 0 |
Show alignments to all cow chromosomes.