Cow genome map

Conread name: rtra01_i24r1.y1

Conread position: 1-140
Cow position:
Alignm length: 146
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 1-140
Cow position:
Alignm length: 145
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 1-140
Cow position:
Alignm length: 146
Alignm identity: 116
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 1-140
Cow position:
Alignm length: 145
Alignm identity: 117
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 56, 0

Conread position: 1-140
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 1-140
Cow position:
Alignm length: 143
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 1-218
Cow position:
Alignm length: 225
Alignm identity: 164
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 96

Conread position: 1-219
Cow position:
Alignm length: 226
Alignm identity: 171
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 56, 146

Conread position: 1-219
Cow position:
Alignm length: 225
Alignm identity: 168
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 57, 38

Conread position: 1-219
Cow position:
Alignm length: 225
Alignm identity: 169
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 56, 147

Conread position: 1-219
Cow position:
Alignm length: 225
Alignm identity: 171
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 56, 146

Conread position: 1-219
Cow position:
Alignm length: 227
Alignm identity: 172
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 56, 147

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 172
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 55, 147

Conread position: 1-226
Cow position:
Alignm length: 233
Alignm identity: 175
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 55, 148

Conread position: 1-226
Cow position:
Alignm length: 233
Alignm identity: 169
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 148

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 174
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 55, 147

Conread position: 1-226
Cow position:
Alignm length: 239
Alignm identity: 170
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 56, 156

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 168
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 56, 142

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 171
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 56, 142

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 180
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 56, 147

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 175
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 56, 142

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 176
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 56, 147

Conread position: 1-226
Cow position:
Alignm length: 230
Alignm identity: 173
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 60, 143

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 171
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 55, 147

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 175
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 56, 104

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 173
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 67, 146

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 174
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 67, 147

Conread position: 1-226
Cow position:
Alignm length: 233
Alignm identity: 172
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 49, 148

Conread position: 1-226
Cow position:
Alignm length: 231
Alignm identity: 174
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 53, 146

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 175
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 56, 145

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 170
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 56, 40

Conread position: 1-226
Cow position:
Alignm length: 234
Alignm identity: 170
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 56, 6

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 171
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 56, 27

Conread position: 1-226
Cow position:
Alignm length: 233
Alignm identity: 157
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 109

Conread position: 1-226
Cow position:
Alignm length: 231
Alignm identity: 177
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 56, 146

Conread position: 1-307
Cow position:
Alignm length: 324
Alignm identity: 231
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 55, 156

Conread position: 1-353
Cow position:
Alignm length: 373
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 147

Conread position: 1-353
Cow position:
Alignm length: 368
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 46

Conread position: 1-358
Cow position:
Alignm length: 371
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 172

Conread position: 1-358
Cow position:
Alignm length: 378
Alignm identity: 262
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 65, 23

Conread position: 1-361
Cow position:
Alignm length: 378
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-361
Cow position:
Alignm length: 386
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 147

Conread position: 1-361
Cow position:
Alignm length: 378
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-361
Cow position:
Alignm length: 378
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 46

Conread position: 1-362
Cow position:
Alignm length: 369
Alignm identity: 231
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 67, 146

Conread position: 1-362
Cow position:
Alignm length: 371
Alignm identity: 250
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 56, 105

Conread position: 1-362
Cow position:
Alignm length: 373
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 180

Conread position: 1-362
Cow position:
Alignm length: 379
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-362
Cow position:
Alignm length: 389
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 147

Conread position: 1-362
Cow position:
Alignm length: 379
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 210

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 209

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 381
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 157

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 376
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 193

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 381
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 211

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 376
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-363
Cow position:
Alignm length: 381
Alignm identity: 256
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 56, 96

Conread position: 1-363
Cow position:
Alignm length: 381
Alignm identity: 255
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 56, 96

Conread position: 1-363
Cow position:
Alignm length: 376
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 138

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 379
Alignm identity: 262
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 56, 147

Conread position: 1-363
Cow position:
Alignm length: 379
Alignm identity: 261
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 67, 15

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 96

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 40

Conread position: 1-363
Cow position:
Alignm length: 385
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 161

Conread position: 1-363
Cow position:
Alignm length: 386
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 162

Conread position: 1-363
Cow position:
Alignm length: 376
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 152

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 188

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 265
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 56, 156

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-363
Cow position:
Alignm length: 382
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 212

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 374
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 149

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 369
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 149

Conread position: 1-363
Cow position:
Alignm length: 382
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 147

Conread position: 1-363
Cow position:
Alignm length: 390
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 109

Conread position: 2-149
Cow position:
Alignm length: 154
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 2-225
Cow position:
Alignm length: 230
Alignm identity: 177
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 55, 146

Conread position: 2-362
Cow position:
Alignm length: 378
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 131

Conread position: 3-226
Cow position:
Alignm length: 225
Alignm identity: 152
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 168, 77

Conread position: 3-226
Cow position:
Alignm length: 230
Alignm identity: 178
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 54, 145

Conread position: 3-226
Cow position:
Alignm length: 233
Alignm identity: 169
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 47, 81

Conread position: 3-344
Cow position:
Alignm length: 354
Alignm identity: 245
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 54, 90

Conread position: 3-347
Cow position:
Alignm length: 363
Alignm identity: 254
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 65, 121

Conread position: 3-363
Cow position:
Alignm length: 374
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 154

Conread position: 3-363
Cow position:
Alignm length: 373
Alignm identity: 248
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 127, 65

Conread position: 5-226
Cow position:
Alignm length: 228
Alignm identity: 168
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 51, 143

Conread position: 7-363
Cow position:
Alignm length: 371
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 141

Conread position: 8-226
Cow position:
Alignm length: 225
Alignm identity: 166
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 48, 140

Conread position: 8-363
Cow position:
Alignm length: 374
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 149

Conread position: 17-363
Cow position:
Alignm length: 364
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 140

Conread position: 19-363
Cow position:
Alignm length: 362
Alignm identity: 253
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 37, 142

Conread position: 40-363
Cow position:
Alignm length: 341
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 117

Conread position: 43-363
Cow position:
Alignm length: 338
Alignm identity: 241
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 13, 114

Conread position: 69-363
Cow position:
Alignm length: 306
Alignm identity: 219
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 106, 82

Conread position: 69-363
Cow position:
Alignm length: 303
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 82

Conread position: 91-363
Cow position:
Alignm length: 281
Alignm identity: 196
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 84, 36

Conread position: 162-363
Cow position:
Alignm length: 213
Alignm identity: 151
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 162-363
Cow position:
Alignm length: 206
Alignm identity: 151
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 55, 41

Conread position: 163-363
Cow position:
Alignm length: 212
Alignm identity: 155
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 65, 0

Show alignments to all cow chromosomes.