Cow genome map

Conread name: rtra01_i24r1.y1

Conread position: 1-135
Cow position:
Alignm length: 141
Alignm identity: 116
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 55, 0

Conread position: 1-140
Cow position:
Alignm length: 140
Alignm identity: 111
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-140
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 1-140
Cow position:
Alignm length: 145
Alignm identity: 120
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 56, 0

Conread position: 1-201
Cow position:
Alignm length: 208
Alignm identity: 154
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 55, 148

Conread position: 1-219
Cow position:
Alignm length: 225
Alignm identity: 172
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 56, 96

Conread position: 1-219
Cow position:
Alignm length: 226
Alignm identity: 171
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 57, 13

Conread position: 1-220
Cow position:
Alignm length: 226
Alignm identity: 169
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 65, 91

Conread position: 1-226
Cow position:
Alignm length: 233
Alignm identity: 170
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 56, 146

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 171
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 55, 147

Conread position: 1-226
Cow position:
Alignm length: 233
Alignm identity: 169
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 57, 149

Conread position: 1-226
Cow position:
Alignm length: 233
Alignm identity: 169
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 56, 146

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 171
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 56, 147

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 171
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 56, 147

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 171
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 55, 147

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 177
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 65, 147

Conread position: 1-226
Cow position:
Alignm length: 233
Alignm identity: 176
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 56, 148

Conread position: 1-226
Cow position:
Alignm length: 230
Alignm identity: 175
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 56, 110

Conread position: 1-226
Cow position:
Alignm length: 233
Alignm identity: 172
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 51, 117

Conread position: 1-226
Cow position:
Alignm length: 231
Alignm identity: 170
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 58, 146

Conread position: 1-226
Cow position:
Alignm length: 234
Alignm identity: 173
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 33, 144

Conread position: 1-313
Cow position:
Alignm length: 323
Alignm identity: 227
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 56, 139

Conread position: 1-334
Cow position:
Alignm length: 357
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 1-353
Cow position:
Alignm length: 371
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 145

Conread position: 1-357
Cow position:
Alignm length: 374
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-358
Cow position:
Alignm length: 374
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 226

Conread position: 1-361
Cow position:
Alignm length: 378
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 89

Conread position: 1-361
Cow position:
Alignm length: 378
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 315

Conread position: 1-361
Cow position:
Alignm length: 379
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 96

Conread position: 1-361
Cow position:
Alignm length: 376
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-362
Cow position:
Alignm length: 390
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 147

Conread position: 1-362
Cow position:
Alignm length: 375
Alignm identity: 263
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 89, 6

Conread position: 1-363
Cow position:
Alignm length: 381
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 211

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 35

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 211

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 381
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 157

Conread position: 1-363
Cow position:
Alignm length: 379
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 371
Alignm identity: 261
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 56, 134

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 379
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 96

Conread position: 1-363
Cow position:
Alignm length: 376
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-363
Cow position:
Alignm length: 382
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 158

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 91

Conread position: 1-363
Cow position:
Alignm length: 381
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 211

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 381
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 148

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-363
Cow position:
Alignm length: 384
Alignm identity: 261
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 56, 0

Conread position: 1-363
Cow position:
Alignm length: 381
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 157

Conread position: 2-140
Cow position:
Alignm length: 151
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 2-226
Cow position:
Alignm length: 231
Alignm identity: 171
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 55, 146

Conread position: 3-149
Cow position:
Alignm length: 152
Alignm identity: 120
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 54, 13

Conread position: 3-361
Cow position:
Alignm length: 377
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 142

Conread position: 3-363
Cow position:
Alignm length: 378
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 94

Conread position: 7-363
Cow position:
Alignm length: 374
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 204

Conread position: 18-219
Cow position:
Alignm length: 208
Alignm identity: 160
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 39, 130

Conread position: 20-363
Cow position:
Alignm length: 361
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 137

Conread position: 22-361
Cow position:
Alignm length: 356
Alignm identity: 253
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 35, 159

Conread position: 51-363
Cow position:
Alignm length: 322
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 100

Conread position: 69-363
Cow position:
Alignm length: 304
Alignm identity: 212
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 111, 68

Conread position: 92-363
Cow position:
Alignm length: 283
Alignm identity: 198
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 83, 59

Conread position: 162-363
Cow position:
Alignm length: 209
Alignm identity: 153
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 68, 103

Conread position: 165-361
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 70, 150

Conread position: 175-362
Cow position:
Alignm length: 192
Alignm identity: 134
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 41, 89

Show alignments to all cow chromosomes.