Cow genome map

Conread name: rtra01_i24r1.y1

Conread position: 1-125
Cow position:
Alignm length: 133
Alignm identity: 104
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 1-135
Cow position:
Alignm length: 142
Alignm identity: 118
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 56, 0

Conread position: 1-135
Cow position:
Alignm length: 141
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 1-140
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 1-150
Cow position:
Alignm length: 156
Alignm identity: 116
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 1-189
Cow position:
Alignm length: 197
Alignm identity: 141
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 55, 156

Conread position: 1-208
Cow position:
Alignm length: 214
Alignm identity: 156
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 55, 147

Conread position: 1-209
Cow position:
Alignm length: 215
Alignm identity: 159
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 147

Conread position: 1-217
Cow position:
Alignm length: 224
Alignm identity: 161
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 56, 105

Conread position: 1-219
Cow position:
Alignm length: 225
Alignm identity: 175
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 56, 147

Conread position: 1-219
Cow position:
Alignm length: 225
Alignm identity: 168
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 56, 142

Conread position: 1-219
Cow position:
Alignm length: 226
Alignm identity: 179
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 56, 146

Conread position: 1-224
Cow position:
Alignm length: 230
Alignm identity: 176
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 56, 142

Conread position: 1-225
Cow position:
Alignm length: 231
Alignm identity: 179
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 56, 147

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 173
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 56, 147

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 176
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 55, 147

Conread position: 1-226
Cow position:
Alignm length: 242
Alignm identity: 174
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 58, 159

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 177
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 56, 149

Conread position: 1-226
Cow position:
Alignm length: 237
Alignm identity: 177
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 10, 149

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 177
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 56, 142

Conread position: 1-226
Cow position:
Alignm length: 233
Alignm identity: 174
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 55, 148

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 171
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 55, 147

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 175
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 65, 145

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 176
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 65, 145

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 170
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 57, 147

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 182
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 56, 147

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 173
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 56, 145

Conread position: 1-261
Cow position:
Alignm length: 270
Alignm identity: 185
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 56, 156

Conread position: 1-301
Cow position:
Alignm length: 318
Alignm identity: 223
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 55, 156

Conread position: 1-310
Cow position:
Alignm length: 331
Alignm identity: 227
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 49, 231

Conread position: 1-341
Cow position:
Alignm length: 362
Alignm identity: 252
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 56, 132

Conread position: 1-345
Cow position:
Alignm length: 362
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 159

Conread position: 1-361
Cow position:
Alignm length: 369
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 147

Conread position: 1-361
Cow position:
Alignm length: 380
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 141

Conread position: 1-361
Cow position:
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 1-362
Cow position:
Alignm length: 381
Alignm identity: 269
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 56, 20

Conread position: 1-362
Cow position:
Alignm length: 391
Alignm identity: 273
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 56, 149

Conread position: 1-362
Cow position:
Alignm length: 382
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 145

Conread position: 1-363
Cow position:
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 147

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-363
Cow position:
Alignm length: 387
Alignm identity: 280
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 56, 147

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-363
Cow position:
Alignm length: 381
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 165

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 375
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-363
Cow position:
Alignm length: 381
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 148

Conread position: 1-363
Cow position:
Alignm length: 381
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 148

Conread position: 1-363
Cow position:
Alignm length: 382
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 212

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-363
Cow position:
Alignm length: 379
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 382
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 105

Conread position: 1-363
Cow position:
Alignm length: 377
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 145

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 384
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 152

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 381
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 157

Conread position: 1-363
Cow position:
Alignm length: 381
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 157

Conread position: 2-363
Cow position:
Alignm length: 386
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 37

Conread position: 3-214
Cow position:
Alignm length: 218
Alignm identity: 163
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 54, 143

Conread position: 3-348
Cow position:
Alignm length: 359
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 277

Conread position: 3-350
Cow position:
Alignm length: 355
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 145

Conread position: 3-363
Cow position:
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 131

Conread position: 5-345
Cow position:
Alignm length: 361
Alignm identity: 257
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 47, 88

Conread position: 7-147
Cow position:
Alignm length: 147
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 40

Conread position: 8-361
Cow position:
Alignm length: 363
Alignm identity: 239
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 49, 137

Conread position: 16-363
Cow position:
Alignm length: 365
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 141

Conread position: 34-226
Cow position:
Alignm length: 197
Alignm identity: 143
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 25, 61

Conread position: 53-350
Cow position:
Alignm length: 321
Alignm identity: 221
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 175, 10

Conread position: 59-363
Cow position:
Alignm length: 313
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 68

Conread position: 86-363
Cow position:
Alignm length: 289
Alignm identity: 202
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 89, 65

Conread position: 162-363
Cow position:
Alignm length: 212
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 79, 65

Show alignments to all cow chromosomes.