Cow genome map


           Conread name:
           rtra01_i24r1.y1
        

               Conread position:
               1-136
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               1-218
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               55, 147
               

               Conread position:
               1-219
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               55, 147
               

               Conread position:
               1-219
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               56, 143
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               55, 147
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               67, 145
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               56, 147
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               56, 150
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               65, 107
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               66, 146
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               56, 147
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               56, 147
               

               Conread position:
               1-308
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               52, 237
               

               Conread position:
               1-318
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               55, 156
               

               Conread position:
               1-345
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               248
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               59, 156
               

               Conread position:
               1-360
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 157
               

               Conread position:
               1-361
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               266
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               56, 159
               

               Conread position:
               1-361
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               258
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               56, 96
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 156
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               255
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               55, 147
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 131
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 157
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 99
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 156
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 210
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 156
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               253
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               100, 35
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 156
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               260
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               56, 100
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 156
               

               Conread position:
               3-362
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               262
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               54, 202
               

               Conread position:
               3-363
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 154
               

               Conread position:
               4-140
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               53, 39
               

               Conread position:
               5-315
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               52, 152
               

               Conread position:
               10-363
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 147
               

               Conread position:
               54-226
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               92, 26
               

               Conread position:
               59-363
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               12, 94
               

               Conread position:
               96-363
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               79, 8
               
Show alignments to all cow chromosomes.