Cow genome map
Conread name: | rtra01_i24r1.y1 |
Conread position: | 1-136 |
Cow position: | chr12:24993224-24993083 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 111 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 1-140 |
Cow position: | chr12:22571586-22571731 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 115 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 1-218 |
Cow position: | chr12:31424052-31423842 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 165 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 55, 147 |
Conread position: | 1-219 |
Cow position: | chr12:15539541-15539752 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 167 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 55, 147 |
Conread position: | 1-219 |
Cow position: | chr12:21610335-21610547 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 168 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 56, 143 |
Conread position: | 1-226 |
Cow position: | chr12:14569072-14568854 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 169 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 55, 143 |
Conread position: | 1-226 |
Cow position: | chr12:22518169-22517951 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 174 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 55, 147 |
Conread position: | 1-226 |
Cow position: | chr12:24980464-24980682 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 171 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 67, 145 |
Conread position: | 1-226 |
Cow position: | chr12:25266590-25266372 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 179 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 56, 147 |
Conread position: | 1-226 |
Cow position: | chr12:28764259-28764038 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 177 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 56, 150 |
Conread position: | 1-226 |
Cow position: | chr12:34964555-34964338 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 166 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 65, 107 |
Conread position: | 1-226 |
Cow position: | chr12:35548383-35548166 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 177 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 66, 146 |
Conread position: | 1-226 |
Cow position: | chr12:36212999-36213217 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 172 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 56, 147 |
Conread position: | 1-226 |
Cow position: | chr12:38893105-38893323 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 174 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 56, 147 |
Conread position: | 1-308 |
Cow position: | chr12:21057952-21057629 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 215 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 52, 237 |
Conread position: | 1-318 |
Cow position: | chr12:36405925-36405592 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 233 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 55, 156 |
Conread position: | 1-345 |
Cow position: | chr12:21392281-21391920 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 248 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 59, 156 |
Conread position: | 1-360 |
Cow position: | chr12:3363685-3364061 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 157 |
Conread position: | 1-361 |
Cow position: | chr12:19156111-19155741 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 266 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 56, 159 |
Conread position: | 1-361 |
Cow position: | chr12:32656298-32656667 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 258 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 56, 96 |
Conread position: | 1-363 |
Cow position: | chr12:536826-536448 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 156 |
Conread position: | 1-363 |
Cow position: | chr12:1437671-1438030 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 255 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 55, 147 |
Conread position: | 1-363 |
Cow position: | chr12:1775172-1774798 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 131 |
Conread position: | 1-363 |
Cow position: | chr12:6106605-6106228 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 157 |
Conread position: | 1-363 |
Cow position: | chr12:20995014-20994644 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 99 |
Conread position: | 1-363 |
Cow position: | chr12:21664879-21665256 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 156 |
Conread position: | 1-363 |
Cow position: | chr12:21719429-21719056 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 210 |
Conread position: | 1-363 |
Cow position: | chr12:24993080-24992702 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 156 |
Conread position: | 1-363 |
Cow position: | chr12:25143958-25143605 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 253 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 100, 35 |
Conread position: | 1-363 |
Cow position: | chr12:27958783-27958405 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 156 |
Conread position: | 1-363 |
Cow position: | chr12:35312148-35311791 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 260 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 56, 100 |
Conread position: | 1-363 |
Cow position: | chr12:46163482-46163860 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 156 |
Conread position: | 3-362 |
Cow position: | chr12:21904117-21904486 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 262 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 54, 202 |
Conread position: | 3-363 |
Cow position: | chr12:39929913-39930289 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 154 |
Conread position: | 4-140 |
Cow position: | chr12:27479525-27479666 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 111 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 53, 39 |
Conread position: | 5-315 |
Cow position: | chr12:21211495-21211821 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 226 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 52, 152 |
Conread position: | 10-363 |
Cow position: | chr12:24696298-24696666 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 147 |
Conread position: | 54-226 |
Cow position: | chr12:1107834-1108003 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 125 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 92, 26 |
Conread position: | 59-363 |
Cow position: | chr12:25148813-25148497 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 221 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 12, 94 |
Conread position: | 96-363 |
Cow position: | chr12:32757541-32757817 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 195 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 79, 8 |
Show alignments to all cow chromosomes.