Cow genome map


           Conread name:
           rtra01_i24r1.y1
        

               Conread position:
               1-136
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               64, 42
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               56, 147
               

               Conread position:
               1-212
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               56, 147
               

               Conread position:
               1-219
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               56, 150
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               55, 142
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               56, 146
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               182
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               56, 142
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               56, 147
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               56, 148
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               56, 118
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               56, 147
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               56, 148
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               56, 147
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               56, 147
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               56, 113
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               55, 147
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               65, 95
               

               Conread position:
               1-308
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               235
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               56, 147
               

               Conread position:
               1-345
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 157
               

               Conread position:
               1-349
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 156
               

               Conread position:
               1-361
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               262
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               56, 92
               

               Conread position:
               1-362
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 137
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 164
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 156
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 156
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 156
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 213
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 105
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 157
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 157
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 157
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 156
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 142
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 159
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 131
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 161
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 210
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 156
               

               Conread position:
               2-363
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 154
               

               Conread position:
               3-226
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               49, 140
               

               Conread position:
               3-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 154
               

               Conread position:
               8-363
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 140
               

               Conread position:
               13-226
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               44, 135
               

               Conread position:
               13-226
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               45, 135
               

               Conread position:
               14-349
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               249
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               52, 10
               

               Conread position:
               15-363
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 142
               

               Conread position:
               19-226
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               38, 129
               

               Conread position:
               54-363
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               26, 100
               
Show alignments to all cow chromosomes.