Cow genome map

Conread name: rtra01_i24r1.y1

Conread position: 1-140
Cow position: chr14:35383247-35383105 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 119
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 56, 0

Conread position: 1-226
Cow position: chr14:5644808-5645028 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 67, 149

Conread position: 1-226
Cow position: chr14:9047242-9047460 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 175
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 56, 147

Conread position: 1-226
Cow position: chr14:9811085-9811303 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 173
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 56, 142

Conread position: 1-226
Cow position: chr14:11474890-11474668 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 175
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 56, 149

Conread position: 1-226
Cow position: chr14:14182634-14182852 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 173
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 55, 147

Conread position: 1-226
Cow position: chr14:14421012-14420783 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 50, 136

Conread position: 1-226
Cow position: chr14:23254934-23254716 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 176
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 56, 147

Conread position: 1-226
Cow position: chr14:38435437-38435655 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 172
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 67, 145

Conread position: 1-226
Cow position: chr14:41445409-41445627 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 176
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 50, 147

Conread position: 1-226
Cow position: chr14:43563480-43563717 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 56, 89

Conread position: 1-226
Cow position: chr14:44773422-44773198 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 20

Conread position: 1-302
Cow position: chr14:45165424-45165740 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 221
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 51, 208

Conread position: 1-357
Cow position: chr14:12482839-12483177 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 255
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 56, 88

Conread position: 1-361
Cow position: chr14:15272857-15272482 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 211

Conread position: 1-363
Cow position: chr14:749194-748816 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 1-363
Cow position: chr14:1660860-1661228 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 147

Conread position: 1-363
Cow position: chr14:7226812-7227190 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position: chr14:11563944-11564317 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 260
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 57, 132

Conread position: 1-363
Cow position: chr14:13237395-13237017 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 147

Conread position: 1-363
Cow position: chr14:15337229-15336851 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position: chr14:17488919-17488557 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 116

Conread position: 1-363
Cow position: chr14:17762983-17762607 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 148

Conread position: 1-363
Cow position: chr14:19418498-19418876 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position: chr14:22104153-22103775 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position: chr14:26450088-26449734 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 136

Conread position: 1-363
Cow position: chr14:28351292-28350916 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 15

Conread position: 1-363
Cow position: chr14:29773718-29773346 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 262
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 56, 116

Conread position: 1-363
Cow position: chr14:35419285-35419659 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-363
Cow position: chr14:44236054-44236429 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 157

Conread position: 1-363
Cow position: chr14:45789380-45789753 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 158

Conread position: 1-363
Cow position: chr14:47579022-47579400 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 2-208
Cow position: chr14:18288803-18289002 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 161
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 55, 146

Conread position: 3-363
Cow position: chr14:21390938-21390579 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 145

Conread position: 3-363
Cow position: chr14:46375719-46376092 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 209

Conread position: 8-219
Cow position: chr14:34629791-34629587 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 166
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 48, 140

Conread position: 9-363
Cow position: chr14:40968567-40968937 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 148

Conread position: 13-362
Cow position: chr14:23230347-23229986 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 245
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 143, 56

Conread position: 36-361
Cow position: chr14:13463841-13464172 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 241
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 21, 173

Conread position: 51-363
Cow position: chr14:13683026-13683348 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 100

Conread position: 62-363
Cow position: chr14:28208815-28208501 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 217
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 9, 91

Conread position: 69-363
Cow position: chr14:16037078-16037382 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 219
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 106, 82

Show alignments to all cow chromosomes.