Cow genome map


           Conread name:
           rtra01_i24r1.y1
        

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               56, 149
               

               Conread position:
               1-219
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               56, 147
               

               Conread position:
               1-225
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               56, 147
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               56, 147
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               55, 147
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               55, 147
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               56, 141
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               70, 110
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               56, 147
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               55, 145
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               55, 147
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               56, 147
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               56, 147
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               55, 147
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               56, 147
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               55, 147
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               65, 46
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               56, 147
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               56, 147
               

               Conread position:
               1-318
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               235
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               55, 156
               

               Conread position:
               1-325
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               238
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               56, 228
               

               Conread position:
               1-347
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               246
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               145, 67
               

               Conread position:
               1-356
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               252
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               56, 147
               

               Conread position:
               1-361
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 24
               

               Conread position:
               1-362
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 188
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               252
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               67, 207
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 156
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 155
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 24
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 210
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               265
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               44, 102
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 158
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 156
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 156
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               274
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               9, 158
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 156
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 156
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 156
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 156
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 21
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 156
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 157
               

               Conread position:
               3-363
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               3-363
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               275
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               63, 145
               

               Conread position:
               5-226
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               51, 143
               

               Conread position:
               5-361
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               256
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               72, 46
               

               Conread position:
               6-363
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 93
               

               Conread position:
               8-363
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 89
               

               Conread position:
               16-223
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               44-226
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               72-363
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               214
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               103, 79
               

               Conread position:
               91-363
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               84, 60
               
Show alignments to all cow chromosomes.