Cow genome map
Conread name: | rtra01_i24r1.y1 |
Conread position: | 1-149 |
Cow position: | chr16:1958580-1958426 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 121 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 1-213 |
Cow position: | chr16:5762852-5763072 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 156 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 65, 99 |
Conread position: | 1-214 |
Cow position: | chr16:56861370-56861576 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 163 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 55, 147 |
Conread position: | 1-219 |
Cow position: | chr16:34505759-34505971 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 176 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 50, 146 |
Conread position: | 1-219 |
Cow position: | chr16:46520988-46520773 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 171 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 59, 151 |
Conread position: | 1-226 |
Cow position: | chr16:839344-839562 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 177 |
Alignm E-value: | 9e-36 |
Alignm gaps (pig, cow): | 56, 147 |
Conread position: | 1-226 |
Cow position: | chr16:3819425-3819643 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 174 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 57, 105 |
Conread position: | 1-226 |
Cow position: | chr16:4756084-4756303 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 175 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 67, 146 |
Conread position: | 1-226 |
Cow position: | chr16:6733807-6733589 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 171 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 55, 147 |
Conread position: | 1-226 |
Cow position: | chr16:16150688-16150469 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 174 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 56, 148 |
Conread position: | 1-226 |
Cow position: | chr16:23098401-23098619 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 180 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 56, 147 |
Conread position: | 1-226 |
Cow position: | chr16:29049492-29049710 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 176 |
Alignm E-value: | 9e-36 |
Alignm gaps (pig, cow): | 56, 149 |
Conread position: | 1-226 |
Cow position: | chr16:29207161-29206950 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 168 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 51, 99 |
Conread position: | 1-226 |
Cow position: | chr16:41161409-41161180 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 180 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 56, 160 |
Conread position: | 1-226 |
Cow position: | chr16:46102556-46102338 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 175 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 56, 149 |
Conread position: | 1-226 |
Cow position: | chr16:49463518-49463300 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 169 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 55, 147 |
Conread position: | 1-345 |
Cow position: | chr16:53991024-53991380 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 154 |
Conread position: | 1-350 |
Cow position: | chr16:44675529-44675872 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 240 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 70, 97 |
Conread position: | 1-359 |
Cow position: | chr16:27711117-27710765 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 46 |
Conread position: | 1-362 |
Cow position: | chr16:42074828-42074461 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 46 |
Conread position: | 1-363 |
Cow position: | chr16:34560-34938 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 142 |
Conread position: | 1-363 |
Cow position: | chr16:5526045-5525666 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 212 |
Conread position: | 1-363 |
Cow position: | chr16:11744601-11744979 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 156 |
Conread position: | 1-363 |
Cow position: | chr16:12650990-12651366 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 154 |
Conread position: | 1-363 |
Cow position: | chr16:13539364-13538986 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 156 |
Conread position: | 1-363 |
Cow position: | chr16:15311343-15311721 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 156 |
Conread position: | 1-363 |
Cow position: | chr16:15812129-15812506 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 112 |
Conread position: | 1-363 |
Cow position: | chr16:17111312-17111690 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 156 |
Conread position: | 1-363 |
Cow position: | chr16:18974926-18975306 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 151 |
Conread position: | 1-363 |
Cow position: | chr16:21017620-21017997 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 107 |
Conread position: | 1-363 |
Cow position: | chr16:21189318-21189696 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 156 |
Conread position: | 1-363 |
Cow position: | chr16:23876469-23876092 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 156 |
Conread position: | 1-363 |
Cow position: | chr16:24621637-24621259 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 156 |
Conread position: | 1-363 |
Cow position: | chr16:25260185-25260562 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 156 |
Conread position: | 1-363 |
Cow position: | chr16:28168257-28167880 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 155 |
Conread position: | 1-363 |
Cow position: | chr16:29035954-29036315 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 143 |
Conread position: | 1-363 |
Cow position: | chr16:34532355-34532732 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 210 |
Conread position: | 1-363 |
Cow position: | chr16:37146037-37146415 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 156 |
Conread position: | 1-363 |
Cow position: | chr16:37478800-37478422 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 211 |
Conread position: | 1-363 |
Cow position: | chr16:41515195-41515570 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 63 |
Conread position: | 1-363 |
Cow position: | chr16:45704731-45704355 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 164 |
Conread position: | 1-363 |
Cow position: | chr16:54431634-54432012 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 156 |
Conread position: | 1-363 |
Cow position: | chr16:55591915-55591542 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 201 |
Conread position: | 2-226 |
Cow position: | chr16:26389108-26388887 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 174 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 51, 150 |
Conread position: | 2-333 |
Cow position: | chr16:20377523-20377870 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 210 |
Conread position: | 2-363 |
Cow position: | chr16:29157711-29158060 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 259 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 55, 155 |
Conread position: | 3-226 |
Cow position: | chr16:23097102-23096886 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 178 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 54, 145 |
Conread position: | 3-363 |
Cow position: | chr16:39615302-39615662 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 257 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 62, 119 |
Conread position: | 3-363 |
Cow position: | chr16:49219892-49219511 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 258 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 54, 144 |
Conread position: | 6-140 |
Cow position: | chr16:49171022-49170883 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 108 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 51, 135 |
Conread position: | 53-363 |
Cow position: | chr16:28066176-28066495 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 228 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 122, 12 |
Conread position: | 65-363 |
Cow position: | chr16:4973392-4973087 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 213 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 110, 86 |
Conread position: | 69-363 |
Cow position: | chr16:24988583-24988279 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 220 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 106, 82 |
Conread position: | 105-363 |
Cow position: | chr16:26316881-26317149 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 191 |
Alignm E-value: | 8e-35 |
Alignm gaps (pig, cow): | 70, 46 |
Show alignments to all cow chromosomes.