Cow genome map


           Conread name:
           rtra01_i24r1.y1
        

               Conread position:
               1-124
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               1-125
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               70, 50
               

               Conread position:
               1-136
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               49, 39
               

               Conread position:
               1-136
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               59, 91
               

               Conread position:
               1-147
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               56, 18
               

               Conread position:
               1-149
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               53, 108
               

               Conread position:
               1-199
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               56, 131
               

               Conread position:
               1-217
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               56, 155
               

               Conread position:
               1-219
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               70, 143
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               55, 147
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               65, 137
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               55, 147
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               55, 147
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               55, 147
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               56, 146
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               55, 147
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               55, 147
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               55, 147
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               56, 148
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               56, 144
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               55, 105
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               56, 147
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               56, 149
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               56, 148
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               56, 149
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               55, 147
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               56, 147
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               56, 148
               

               Conread position:
               1-314
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               56, 209
               

               Conread position:
               1-325
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               70, 144
               

               Conread position:
               1-339
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 155
               

               Conread position:
               1-340
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 166
               

               Conread position:
               1-349
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               251
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               56, 31
               

               Conread position:
               1-358
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 64
               

               Conread position:
               1-358
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               263
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               42, 131
               

               Conread position:
               1-358
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               254
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               52, 218
               

               Conread position:
               1-360
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               264
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               56, 170
               

               Conread position:
               1-361
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 104
               

               Conread position:
               1-362
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               56, 95
               

               Conread position:
               1-362
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               261
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               56, 147
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               264
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               57, 211
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 46
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 156
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 96
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 158
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 149
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 107
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 149
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 149
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 156
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 119
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 156
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 156
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 157
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 156
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               268
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               56, 157
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               281
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               55, 147
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 156
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 156
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               264
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               49, 28
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 156
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               276
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               191, 67
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 156
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 96
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 156
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 185
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 218
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 178
               

               Conread position:
               2-219
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               64, 104
               

               Conread position:
               2-226
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               63, 141
               

               Conread position:
               2-226
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               64, 146
               

               Conread position:
               3-226
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               53, 146
               

               Conread position:
               3-226
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               54, 145
               

               Conread position:
               3-363
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               265
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               63, 29
               

               Conread position:
               3-363
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 181
               

               Conread position:
               8-226
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               48, 140
               

               Conread position:
               8-361
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 140
               

               Conread position:
               14-363
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               266
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               39, 190
               

               Conread position:
               18-363
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               257
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               39, 115
               

               Conread position:
               21-363
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 136
               

               Conread position:
               39-363
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 118
               

               Conread position:
               81-333
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               94, 70
               
Show alignments to all cow chromosomes.