Cow genome map


           Conread name:
           rtra01_i24r1.y1
        

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               51, 141
               

               Conread position:
               1-217
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               64, 147
               

               Conread position:
               1-219
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               56, 145
               

               Conread position:
               1-225
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               63, 148
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               55, 147
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               55, 147
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               56, 148
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               64, 147
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               56, 145
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               55, 147
               

               Conread position:
               1-337
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               242
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               55, 179
               

               Conread position:
               1-349
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               240
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               56, 16
               

               Conread position:
               1-362
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 160
               

               Conread position:
               1-362
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 156
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 156
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 187
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 107
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 156
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 156
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 156
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               254
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               174, 67
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 66
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 150
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 156
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 156
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               259
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               56, 134
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 210
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 156
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 156
               

               Conread position:
               2-226
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               66, 146
               

               Conread position:
               2-362
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               262
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               54, 103
               

               Conread position:
               3-226
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               54, 145
               

               Conread position:
               5-346
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 96
               

               Conread position:
               7-363
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 94
               

               Conread position:
               9-363
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 148
               

               Conread position:
               12-256
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               44, 145
               

               Conread position:
               32-363
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               253
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               25, 119
               

               Conread position:
               50-363
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 101
               

               Conread position:
               52-363
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               31, 95
               

               Conread position:
               86-363
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               89, 65
               

               Conread position:
               168-363
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               60, 0
               
Show alignments to all cow chromosomes.