Cow genome map

Conread name: rtra01_i24r1.y1

Conread position: 1-140
Cow position: chr21:7062745-7062612 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 1-219
Cow position: chr21:47976932-47977143 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 167
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 55, 147

Conread position: 1-226
Cow position: chr21:3923186-3923406 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 67, 99

Conread position: 1-226
Cow position: chr21:11508861-11509081 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 176
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 65, 149

Conread position: 1-226
Cow position: chr21:18979725-18979946 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 63, 150

Conread position: 1-226
Cow position: chr21:26634304-26634087 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 66, 153

Conread position: 1-226
Cow position: chr21:27286880-27287122 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 182
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 56, 0

Conread position: 1-226
Cow position: chr21:36375912-36376130 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 178
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 56, 147

Conread position: 1-226
Cow position: chr21:39428325-39428542 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 55, 20

Conread position: 1-273
Cow position: chr21:34901910-34901628 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 192
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 55, 156

Conread position: 1-298
Cow position: chr21:34656879-34657195 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 227
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 65, 158

Conread position: 1-353
Cow position: chr21:26757807-26757439 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 117

Conread position: 1-361
Cow position: chr21:3046257-3046637 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 269
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 56, 91

Conread position: 1-361
Cow position: chr21:21026421-21026788 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 246
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 15, 114

Conread position: 1-362
Cow position: chr21:1285333-1284959 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 259
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 59, 211

Conread position: 1-363
Cow position: chr21:4899040-4898664 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 276
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 55, 148

Conread position: 1-363
Cow position: chr21:11405958-11405580 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position: chr21:27148629-27148251 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-363
Cow position: chr21:30056782-30056404 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position: chr21:41796798-41796421 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-363
Cow position: chr21:42916716-42917093 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-363
Cow position: chr21:48274275-48273897 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 2-362
Cow position: chr21:6864629-6864257 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 264
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 55, 304

Conread position: 3-363
Cow position: chr21:26699740-26699365 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 261
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 54, 91

Conread position: 3-363
Cow position: chr21:34181173-34180797 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 154

Conread position: 5-225
Cow position: chr21:13314381-13314595 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 83, 72

Conread position: 8-363
Cow position: chr21:44632-45003 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 309

Conread position: 26-363
Cow position: chr21:4097549-4097875 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 244
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 42, 13

Conread position: 65-361
Cow position: chr21:27522904-27522604 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 220
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 86, 156

Show alignments to all cow chromosomes.