Cow genome map

Conread name: rtra01_i24r1.y1

Conread position: 1-140
Cow position:
Alignm length: 146
Alignm identity: 116
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 1-219
Cow position:
Alignm length: 225
Alignm identity: 166
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 56, 149

Conread position: 1-224
Cow position:
Alignm length: 230
Alignm identity: 168
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 59, 147

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 169
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 55, 147

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 172
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 56, 147

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 168
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 55, 147

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 176
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 56, 142

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 174
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 56, 147

Conread position: 1-327
Cow position:
Alignm length: 344
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-333
Cow position:
Alignm length: 349
Alignm identity: 234
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 57, 142

Conread position: 1-339
Cow position:
Alignm length: 357
Alignm identity: 247
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 56, 211

Conread position: 1-353
Cow position:
Alignm length: 370
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-358
Cow position:
Alignm length: 374
Alignm identity: 247
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 56, 127

Conread position: 1-360
Cow position:
Alignm length: 373
Alignm identity: 260
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 50, 149

Conread position: 1-360
Cow position:
Alignm length: 371
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 150

Conread position: 1-361
Cow position:
Alignm length: 368
Alignm identity: 266
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 65, 18

Conread position: 1-361
Cow position:
Alignm length: 378
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 106

Conread position: 1-363
Cow position:
Alignm length: 382
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 161

Conread position: 1-363
Cow position:
Alignm length: 379
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 1-363
Cow position:
Alignm length: 381
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 157

Conread position: 1-363
Cow position:
Alignm length: 381
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 161

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 227

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 382
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 99

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 156

Conread position: 1-363
Cow position:
Alignm length: 379
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 28

Conread position: 1-363
Cow position:
Alignm length: 387
Alignm identity: 278
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 49, 133

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 379
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 119

Conread position: 1-363
Cow position:
Alignm length: 375
Alignm identity: 255
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 49, 128

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 347

Conread position: 1-363
Cow position:
Alignm length: 381
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 157

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 376
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 138

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 375
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 87

Conread position: 1-363
Cow position:
Alignm length: 383
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 142

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 147

Conread position: 1-363
Cow position:
Alignm length: 393
Alignm identity: 262
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 53, 116

Conread position: 2-337
Cow position:
Alignm length: 349
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 131

Conread position: 2-361
Cow position:
Alignm length: 378
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 157

Conread position: 3-218
Cow position:
Alignm length: 225
Alignm identity: 158
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 49, 122

Conread position: 3-363
Cow position:
Alignm length: 381
Alignm identity: 270
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 54, 145

Conread position: 3-363
Cow position:
Alignm length: 389
Alignm identity: 279
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 44, 119

Conread position: 4-219
Cow position:
Alignm length: 222
Alignm identity: 170
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 53, 144

Conread position: 5-363
Cow position:
Alignm length: 378
Alignm identity: 260
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 41, 154

Conread position: 5-363
Cow position:
Alignm length: 376
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 152

Conread position: 16-307
Cow position:
Alignm length: 309
Alignm identity: 209
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 51, 141

Conread position: 43-363
Cow position:
Alignm length: 329
Alignm identity: 221
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 27, 109

Conread position: 51-363
Cow position:
Alignm length: 322
Alignm identity: 211
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 91, 0

Conread position: 54-363
Cow position:
Alignm length: 323
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 99

Conread position: 162-362
Cow position:
Alignm length: 211
Alignm identity: 151
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 54, 113

Conread position: 190-363
Cow position:
Alignm length: 181
Alignm identity: 129
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 38, 131

Show alignments to all cow chromosomes.