Cow genome map
| Conread name: | rtra01_i24r1.y1 |
| Conread position: | 1-219 |
| Cow position: | chr25:26781550-26781339 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 56, 147 |
| Conread position: | 1-219 |
| Cow position: | chr25:32578125-32577920 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 1-219 |
| Cow position: | chr25:33688687-33688476 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 57, 145 |
| Conread position: | 1-226 |
| Cow position: | chr25:11955304-11955534 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 44, 148 |
| Conread position: | 1-226 |
| Cow position: | chr25:18190843-18190620 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 56, 154 |
| Conread position: | 1-226 |
| Cow position: | chr25:18489584-18489814 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 57, 135 |
| Conread position: | 1-226 |
| Cow position: | chr25:27019705-27019487 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 56, 147 |
| Conread position: | 1-226 |
| Cow position: | chr25:29803216-29802995 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 56, 143 |
| Conread position: | 1-345 |
| Cow position: | chr25:18179556-18179913 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 209 |
| Conread position: | 1-345 |
| Cow position: | chr25:18264758-18265088 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 245 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 43, 34 |
| Conread position: | 1-353 |
| Cow position: | chr25:25481075-25480708 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 95 |
| Conread position: | 1-358 |
| Cow position: | chr25:11665204-11665580 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 211 |
| Conread position: | 1-361 |
| Cow position: | chr25:34503697-34503314 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 1-362 |
| Cow position: | chr25:12939675-12939298 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 211 |
| Conread position: | 1-363 |
| Cow position: | chr25:16923605-16923231 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 191 |
| Conread position: | 1-363 |
| Cow position: | chr25:17554937-17554558 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 15 |
| Conread position: | 1-363 |
| Cow position: | chr25:21949330-21949708 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 320 |
| Conread position: | 1-363 |
| Cow position: | chr25:22197854-22197476 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 156 |
| Conread position: | 1-363 |
| Cow position: | chr25:24007440-24007818 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 156 |
| Conread position: | 1-363 |
| Cow position: | chr25:29526329-29525951 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 156 |
| Conread position: | 1-363 |
| Cow position: | chr25:35553224-35553580 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 272 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 56, 24 |
| Conread position: | 1-363 |
| Cow position: | chr25:39387168-39387546 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 210 |
| Conread position: | 2-360 |
| Cow position: | chr25:35561965-35561592 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 38, 33 |
| Conread position: | 2-363 |
| Cow position: | chr25:13959604-13959977 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 210 |
| Conread position: | 3-363 |
| Cow position: | chr25:41098661-41098286 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 83 |
| Conread position: | 51-362 |
| Cow position: | chr25:37648040-37648341 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 234 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 175, 77 |
| Conread position: | 56-363 |
| Cow position: | chr25:7223840-7223521 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 15, 97 |
| Conread position: | 87-361 |
| Cow position: | chr25:28421073-28420791 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 211 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 59, 89 |
| Conread position: | 102-363 |
| Cow position: | chr25:35571459-35571730 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 73, 49 |
Show alignments to all cow chromosomes.