Cow genome map

Conread name: rtra01_i24r1.y1

Conread position: 1-140
Cow position: chr28:5767688-5767834 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 121
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 56, 0

Conread position: 1-140
Cow position: chr28:14891742-14891886 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 55, 109

Conread position: 1-149
Cow position: chr28:25334090-25333936 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 1-219
Cow position: chr28:9181659-9181870 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 56, 148

Conread position: 1-219
Cow position: chr28:14110860-14111071 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 55, 147

Conread position: 1-219
Cow position: chr28:24591663-24591874 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 56, 147

Conread position: 1-219
Cow position: chr28:24885650-24885861 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 56, 147

Conread position: 1-220
Cow position: chr28:4958713-4958508 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 170
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 70, 33

Conread position: 1-225
Cow position: chr28:2088362-2088580 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 179
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 56, 143

Conread position: 1-226
Cow position: chr28:444196-444415 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 171
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 56, 148

Conread position: 1-226
Cow position: chr28:1215041-1214823 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 177
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 56, 147

Conread position: 1-226
Cow position: chr28:1812170-1811952 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 175
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 56, 147

Conread position: 1-226
Cow position: chr28:3004730-3004514 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 56, 147

Conread position: 1-226
Cow position: chr28:6777215-6776996 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 176
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 64, 148

Conread position: 1-226
Cow position: chr28:8718183-8717946 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 1-226
Cow position: chr28:11502441-11502209 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 175
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 56, 169

Conread position: 1-226
Cow position: chr28:12217500-12217282 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 172
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 55, 147

Conread position: 1-226
Cow position: chr28:15604400-15604618 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 172
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 67, 147

Conread position: 1-226
Cow position: chr28:22040619-22040401 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 173
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 65, 147

Conread position: 1-226
Cow position: chr28:26420211-26419993 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 173
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 56, 147

Conread position: 1-226
Cow position: chr28:28357994-28357776 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 175
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 56, 147

Conread position: 1-226
Cow position: chr28:28470812-28471030 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 174
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 56, 147

Conread position: 1-273
Cow position: chr28:10643699-10643415 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 196
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 65, 179

Conread position: 1-353
Cow position: chr28:5824624-5824994 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 211

Conread position: 1-362
Cow position: chr28:5569160-5569530 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 104

Conread position: 1-363
Cow position: chr28:482919-482541 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position: chr28:1956158-1956536 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 277
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 55, 149

Conread position: 1-363
Cow position: chr28:2644504-2644882 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-363
Cow position: chr28:4929661-4929283 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position: chr28:5791720-5791344 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 251

Conread position: 1-363
Cow position: chr28:5816441-5816811 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 97

Conread position: 1-363
Cow position: chr28:6478009-6478386 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 210

Conread position: 1-363
Cow position: chr28:6536007-6535631 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 1-363
Cow position: chr28:7829296-7829673 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 158

Conread position: 1-363
Cow position: chr28:10302629-10303005 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 157

Conread position: 1-363
Cow position: chr28:21896084-21896449 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 143

Conread position: 1-363
Cow position: chr28:25761686-25762051 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 156

Conread position: 1-363
Cow position: chr28:28928625-28929003 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position: chr28:34582713-34583091 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 2-362
Cow position: chr28:13880313-13880686 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 272
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 55, 148

Conread position: 2-363
Cow position: chr28:15917734-15917358 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 278
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 55, 27

Conread position: 3-359
Cow position: chr28:12936620-12936247 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 180

Conread position: 3-363
Cow position: chr28:5636842-5637217 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 145

Conread position: 4-226
Cow position: chr28:14665940-14666154 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 176
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 53, 17

Conread position: 5-363
Cow position: chr28:5210915-5211289 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 155

Conread position: 6-361
Cow position: chr28:30305215-30304848 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 258
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 29, 206

Conread position: 49-363
Cow position: chr28:34730577-34730899 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 191
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 97, 133

Conread position: 51-363
Cow position: chr28:7443624-7443302 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 100

Conread position: 65-363
Cow position: chr28:15600875-15600570 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 220
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 85, 158

Conread position: 69-363
Cow position: chr28:25849424-25849728 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 82

Conread position: 98-363
Cow position: chr28:5311866-5312141 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 194
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 77, 53

Show alignments to all cow chromosomes.