Cow genome map
Conread name: | rtra01_i24r1.y1 |
Conread position: | 1-140 |
Cow position: | chr28:5767688-5767834 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 121 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 1-140 |
Cow position: | chr28:14891742-14891886 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 113 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 55, 109 |
Conread position: | 1-149 |
Cow position: | chr28:25334090-25333936 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 115 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 1-219 |
Cow position: | chr28:9181659-9181870 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 167 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 56, 148 |
Conread position: | 1-219 |
Cow position: | chr28:14110860-14111071 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 165 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 55, 147 |
Conread position: | 1-219 |
Cow position: | chr28:24591663-24591874 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 163 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 56, 147 |
Conread position: | 1-219 |
Cow position: | chr28:24885650-24885861 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 171 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 56, 147 |
Conread position: | 1-220 |
Cow position: | chr28:4958713-4958508 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 170 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 70, 33 |
Conread position: | 1-225 |
Cow position: | chr28:2088362-2088580 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 179 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 56, 143 |
Conread position: | 1-226 |
Cow position: | chr28:444196-444415 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 171 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 56, 148 |
Conread position: | 1-226 |
Cow position: | chr28:1215041-1214823 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 177 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 56, 147 |
Conread position: | 1-226 |
Cow position: | chr28:1812170-1811952 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 175 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 56, 147 |
Conread position: | 1-226 |
Cow position: | chr28:3004730-3004514 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 175 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 56, 147 |
Conread position: | 1-226 |
Cow position: | chr28:6777215-6776996 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 176 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 64, 148 |
Conread position: | 1-226 |
Cow position: | chr28:8718183-8717946 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 164 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 1-226 |
Cow position: | chr28:11502441-11502209 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 175 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 56, 169 |
Conread position: | 1-226 |
Cow position: | chr28:12217500-12217282 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 172 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 55, 147 |
Conread position: | 1-226 |
Cow position: | chr28:15604400-15604618 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 172 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 67, 147 |
Conread position: | 1-226 |
Cow position: | chr28:22040619-22040401 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 173 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 65, 147 |
Conread position: | 1-226 |
Cow position: | chr28:26420211-26419993 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 173 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 56, 147 |
Conread position: | 1-226 |
Cow position: | chr28:28357994-28357776 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 175 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 56, 147 |
Conread position: | 1-226 |
Cow position: | chr28:28470812-28471030 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 174 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 56, 147 |
Conread position: | 1-273 |
Cow position: | chr28:10643699-10643415 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 196 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 65, 179 |
Conread position: | 1-353 |
Cow position: | chr28:5824624-5824994 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 211 |
Conread position: | 1-362 |
Cow position: | chr28:5569160-5569530 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 104 |
Conread position: | 1-363 |
Cow position: | chr28:482919-482541 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 156 |
Conread position: | 1-363 |
Cow position: | chr28:1956158-1956536 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 277 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 55, 149 |
Conread position: | 1-363 |
Cow position: | chr28:2644504-2644882 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 156 |
Conread position: | 1-363 |
Cow position: | chr28:4929661-4929283 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 156 |
Conread position: | 1-363 |
Cow position: | chr28:5791720-5791344 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 251 |
Conread position: | 1-363 |
Cow position: | chr28:5816441-5816811 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 97 |
Conread position: | 1-363 |
Cow position: | chr28:6478009-6478386 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 210 |
Conread position: | 1-363 |
Cow position: | chr28:6536007-6535631 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 1-363 |
Cow position: | chr28:7829296-7829673 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 158 |
Conread position: | 1-363 |
Cow position: | chr28:10302629-10303005 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 157 |
Conread position: | 1-363 |
Cow position: | chr28:21896084-21896449 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 143 |
Conread position: | 1-363 |
Cow position: | chr28:25761686-25762051 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 156 |
Conread position: | 1-363 |
Cow position: | chr28:28928625-28929003 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 156 |
Conread position: | 1-363 |
Cow position: | chr28:34582713-34583091 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 156 |
Conread position: | 2-362 |
Cow position: | chr28:13880313-13880686 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 272 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 55, 148 |
Conread position: | 2-363 |
Cow position: | chr28:15917734-15917358 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 278 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 55, 27 |
Conread position: | 3-359 |
Cow position: | chr28:12936620-12936247 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 180 |
Conread position: | 3-363 |
Cow position: | chr28:5636842-5637217 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 145 |
Conread position: | 4-226 |
Cow position: | chr28:14665940-14666154 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 176 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 53, 17 |
Conread position: | 5-363 |
Cow position: | chr28:5210915-5211289 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 155 |
Conread position: | 6-361 |
Cow position: | chr28:30305215-30304848 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 258 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 29, 206 |
Conread position: | 49-363 |
Cow position: | chr28:34730577-34730899 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 191 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 97, 133 |
Conread position: | 51-363 |
Cow position: | chr28:7443624-7443302 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 124, 100 |
Conread position: | 65-363 |
Cow position: | chr28:15600875-15600570 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 220 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 85, 158 |
Conread position: | 69-363 |
Cow position: | chr28:25849424-25849728 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 82 |
Conread position: | 98-363 |
Cow position: | chr28:5311866-5312141 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 194 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 77, 53 |
Show alignments to all cow chromosomes.