Cow genome map

Conread name: rtra01_i24r1.y1

Conread position: 1-140
Cow position:
Alignm length: 147
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 133

Conread position: 1-140
Cow position:
Alignm length: 146
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 1-140
Cow position:
Alignm length: 146
Alignm identity: 117
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 1-217
Cow position:
Alignm length: 223
Alignm identity: 166
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 56, 147

Conread position: 1-218
Cow position:
Alignm length: 226
Alignm identity: 168
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 68, 101

Conread position: 1-219
Cow position:
Alignm length: 225
Alignm identity: 170
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 52, 7

Conread position: 1-219
Cow position:
Alignm length: 227
Alignm identity: 176
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 56, 149

Conread position: 1-219
Cow position:
Alignm length: 225
Alignm identity: 169
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 56, 147

Conread position: 1-226
Cow position:
Alignm length: 234
Alignm identity: 159
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 39

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 176
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 56, 147

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 176
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 56, 39

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 177
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 56, 96

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 174
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 55, 142

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 174
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 56, 147

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 176
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 66, 147

Conread position: 1-226
Cow position:
Alignm length: 234
Alignm identity: 173
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 56, 33

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 167
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 65, 154

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 170
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 56, 147

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 169
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 65, 145

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 178
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 56, 147

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 174
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 57, 147

Conread position: 1-226
Cow position:
Alignm length: 233
Alignm identity: 176
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 56, 145

Conread position: 1-226
Cow position:
Alignm length: 231
Alignm identity: 169
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 56, 33

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 178
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 56, 147

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 177
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 66, 147

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 172
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 55, 147

Conread position: 1-226
Cow position:
Alignm length: 235
Alignm identity: 172
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 56, 145

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 175
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 56, 142

Conread position: 1-226
Cow position:
Alignm length: 233
Alignm identity: 172
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 56, 148

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 173
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 65, 145

Conread position: 1-226
Cow position:
Alignm length: 228
Alignm identity: 159
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 69, 26

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 175
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 55, 147

Conread position: 1-227
Cow position:
Alignm length: 234
Alignm identity: 179
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 56, 146

Conread position: 1-306
Cow position:
Alignm length: 323
Alignm identity: 227
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 55, 156

Conread position: 1-345
Cow position:
Alignm length: 353
Alignm identity: 232
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 56, 152

Conread position: 1-349
Cow position:
Alignm length: 359
Alignm identity: 240
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 56, 146

Conread position: 1-358
Cow position:
Alignm length: 385
Alignm identity: 274
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 51, 122

Conread position: 1-361
Cow position:
Alignm length: 390
Alignm identity: 273
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 52, 145

Conread position: 1-362
Cow position:
Alignm length: 381
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 146

Conread position: 1-363
Cow position:
Alignm length: 381
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 182

Conread position: 1-363
Cow position:
Alignm length: 377
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 1-363
Cow position:
Alignm length: 374
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 147

Conread position: 1-363
Cow position:
Alignm length: 381
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 211

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 370
Alignm identity: 248
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 56, 149

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-363
Cow position:
Alignm length: 379
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 132

Conread position: 1-363
Cow position:
Alignm length: 388
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 142

Conread position: 1-363
Cow position:
Alignm length: 378
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 1-363
Cow position:
Alignm length: 372
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 149

Conread position: 1-363
Cow position:
Alignm length: 371
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 22

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 392
Alignm identity: 280
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 56, 142

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 381
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 187

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-363
Cow position:
Alignm length: 381
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 157

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 156

Conread position: 1-363
Cow position:
Alignm length: 376
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 12

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-363
Cow position:
Alignm length: 382
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 20

Conread position: 1-363
Cow position:
Alignm length: 379
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 160

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-363
Cow position:
Alignm length: 379
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 46

Conread position: 2-135
Cow position:
Alignm length: 140
Alignm identity: 116
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 55, 0

Conread position: 2-219
Cow position:
Alignm length: 224
Alignm identity: 168
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 55, 146

Conread position: 2-226
Cow position:
Alignm length: 231
Alignm identity: 177
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 55, 146

Conread position: 2-271
Cow position:
Alignm length: 278
Alignm identity: 203
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 55, 118

Conread position: 3-347
Cow position:
Alignm length: 359
Alignm identity: 244
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 63, 145

Conread position: 4-363
Cow position:
Alignm length: 382
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 144

Conread position: 12-363
Cow position:
Alignm length: 371
Alignm identity: 251
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 26, 41

Conread position: 16-363
Cow position:
Alignm length: 365
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 141

Conread position: 24-363
Cow position:
Alignm length: 357
Alignm identity: 249
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 32, 133

Conread position: 43-363
Cow position:
Alignm length: 338
Alignm identity: 240
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 13, 114

Conread position: 162-349
Cow position:
Alignm length: 198
Alignm identity: 144
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 68, 89

Conread position: 163-361
Cow position:
Alignm length: 201
Alignm identity: 153
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 111, 48

Show alignments to all cow chromosomes.