Cow genome map

Conread name: rtra01_i24r1.y1

Conread position: 1-139
Cow position:
Alignm length: 145
Alignm identity: 114
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 1-140
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 1-214
Cow position:
Alignm length: 221
Alignm identity: 155
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 66, 131

Conread position: 1-217
Cow position:
Alignm length: 223
Alignm identity: 171
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 56, 145

Conread position: 1-219
Cow position:
Alignm length: 225
Alignm identity: 172
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 65, 147

Conread position: 1-219
Cow position:
Alignm length: 225
Alignm identity: 168
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 55, 147

Conread position: 1-219
Cow position:
Alignm length: 225
Alignm identity: 169
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 55, 147

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 175
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 56, 147

Conread position: 1-226
Cow position:
Alignm length: 233
Alignm identity: 172
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 67, 148

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 172
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 56, 147

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 176
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 56, 20

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 170
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 56, 91

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 172
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 55, 147

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 177
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 56, 152

Conread position: 1-226
Cow position:
Alignm length: 233
Alignm identity: 178
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 65, 133

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 175
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 55, 147

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 175
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 56, 96

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 173
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 55, 147

Conread position: 1-334
Cow position:
Alignm length: 354
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 159

Conread position: 1-336
Cow position:
Alignm length: 354
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 159

Conread position: 1-343
Cow position:
Alignm length: 362
Alignm identity: 253
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 56, 212

Conread position: 1-353
Cow position:
Alignm length: 362
Alignm identity: 248
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 33, 144

Conread position: 1-356
Cow position:
Alignm length: 373
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-358
Cow position:
Alignm length: 388
Alignm identity: 267
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 51, 120

Conread position: 1-361
Cow position:
Alignm length: 379
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-361
Cow position:
Alignm length: 380
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 145

Conread position: 1-361
Cow position:
Alignm length: 385
Alignm identity: 265
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 56, 0

Conread position: 1-361
Cow position:
Alignm length: 378
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 20

Conread position: 1-362
Cow position:
Alignm length: 373
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 232

Conread position: 1-362
Cow position:
Alignm length: 393
Alignm identity: 276
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 49, 159

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 147

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-363
Cow position:
Alignm length: 386
Alignm identity: 270
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 68, 160

Conread position: 1-363
Cow position:
Alignm length: 379
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 96

Conread position: 1-363
Cow position:
Alignm length: 376
Alignm identity: 258
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 174, 32

Conread position: 1-363
Cow position:
Alignm length: 375
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 167

Conread position: 1-363
Cow position:
Alignm length: 378
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 208

Conread position: 1-363
Cow position:
Alignm length: 373
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 53

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 372
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 150

Conread position: 1-363
Cow position:
Alignm length: 376
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 152

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 147

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 374
Alignm identity: 265
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 65, 32

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 381
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-363
Cow position:
Alignm length: 375
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 152

Conread position: 3-226
Cow position:
Alignm length: 230
Alignm identity: 169
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 53, 145

Conread position: 3-363
Cow position:
Alignm length: 392
Alignm identity: 270
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 53, 145

Conread position: 5-363
Cow position:
Alignm length: 376
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 152

Conread position: 6-225
Cow position:
Alignm length: 228
Alignm identity: 172
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 51, 161

Conread position: 7-363
Cow position:
Alignm length: 370
Alignm identity: 259
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 51, 139

Conread position: 8-226
Cow position:
Alignm length: 225
Alignm identity: 168
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 49, 140

Conread position: 8-363
Cow position:
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 149

Conread position: 8-363
Cow position:
Alignm length: 363
Alignm identity: 245
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 44, 149

Conread position: 9-362
Cow position:
Alignm length: 367
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 132

Conread position: 23-226
Cow position:
Alignm length: 210
Alignm identity: 154
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 125

Conread position: 63-363
Cow position:
Alignm length: 312
Alignm identity: 217
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 112, 12

Conread position: 72-363
Cow position:
Alignm length: 303
Alignm identity: 213
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 103, 79

Conread position: 103-363
Cow position:
Alignm length: 272
Alignm identity: 189
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 72, 48

Show alignments to all cow chromosomes.