Cow genome map
Conread name: | rtra01_i24r1.y1 |
Conread position: | 1-136 |
Cow position: | chr6:13367797-13367938 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 113 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 1-140 |
Cow position: | chr6:46296991-46297136 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 115 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 1-140 |
Cow position: | chr6:53810335-53810475 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 110 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 1-148 |
Cow position: | chr6:40318309-40318462 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 113 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 1-186 |
Cow position: | chr6:18912756-18912565 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 111 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 1-212 |
Cow position: | chr6:50112806-50112996 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 158 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 1-214 |
Cow position: | chr6:33810509-33810715 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 161 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 55, 147 |
Conread position: | 1-219 |
Cow position: | chr6:43620449-43620660 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 170 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 56, 147 |
Conread position: | 1-226 |
Cow position: | chr6:1795949-1795732 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 171 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 56, 142 |
Conread position: | 1-226 |
Cow position: | chr6:2377422-2377640 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 172 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 59, 154 |
Conread position: | 1-226 |
Cow position: | chr6:2876313-2876095 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 172 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 56, 142 |
Conread position: | 1-226 |
Cow position: | chr6:7138622-7138404 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 179 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 56, 145 |
Conread position: | 1-226 |
Cow position: | chr6:7467933-7467714 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 179 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 56, 148 |
Conread position: | 1-226 |
Cow position: | chr6:12351547-12351764 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 173 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 65, 133 |
Conread position: | 1-226 |
Cow position: | chr6:12663597-12663379 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 175 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 56, 147 |
Conread position: | 1-226 |
Cow position: | chr6:14928177-14928395 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 172 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 67, 145 |
Conread position: | 1-226 |
Cow position: | chr6:15138448-15138230 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 176 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 56, 149 |
Conread position: | 1-226 |
Cow position: | chr6:19713514-19713298 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 172 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 55, 145 |
Conread position: | 1-226 |
Cow position: | chr6:21711279-21711497 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 177 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 56, 147 |
Conread position: | 1-226 |
Cow position: | chr6:28185612-28185394 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 174 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 55, 147 |
Conread position: | 1-226 |
Cow position: | chr6:28400533-28400315 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 172 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 55, 147 |
Conread position: | 1-226 |
Cow position: | chr6:34018131-34018349 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 174 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 65, 147 |
Conread position: | 1-226 |
Cow position: | chr6:39912043-39912261 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 176 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 56, 147 |
Conread position: | 1-226 |
Cow position: | chr6:45591266-45591484 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 170 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 55, 147 |
Conread position: | 1-226 |
Cow position: | chr6:45937015-45937234 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 171 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 55, 148 |
Conread position: | 1-226 |
Cow position: | chr6:45975227-45975445 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 170 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 55, 147 |
Conread position: | 1-226 |
Cow position: | chr6:51149660-51149878 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 173 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 59, 147 |
Conread position: | 1-226 |
Cow position: | chr6:51867713-51867931 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 171 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 57, 147 |
Conread position: | 1-271 |
Cow position: | chr6:39435203-39434925 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 214 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 35, 152 |
Conread position: | 1-301 |
Cow position: | chr6:28001662-28001342 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 224 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 55, 160 |
Conread position: | 1-301 |
Cow position: | chr6:35967748-35967432 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 223 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 55, 156 |
Conread position: | 1-318 |
Cow position: | chr6:12971199-12970871 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 230 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 55, 156 |
Conread position: | 1-357 |
Cow position: | chr6:24624678-24624333 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 247 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 65, 149 |
Conread position: | 1-361 |
Cow position: | chr6:11870213-11869840 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 208 |
Conread position: | 1-362 |
Cow position: | chr6:10267374-10266996 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 1-362 |
Cow position: | chr6:66189082-66188705 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 156 |
Conread position: | 1-363 |
Cow position: | chr6:127414-127036 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 156 |
Conread position: | 1-363 |
Cow position: | chr6:3272762-3272385 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 211 |
Conread position: | 1-363 |
Cow position: | chr6:3485680-3485323 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 145 |
Conread position: | 1-363 |
Cow position: | chr6:4904256-4903890 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 174, 67 |
Conread position: | 1-363 |
Cow position: | chr6:6120261-6119891 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 147 |
Conread position: | 1-363 |
Cow position: | chr6:10043933-10044311 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 156 |
Conread position: | 1-363 |
Cow position: | chr6:11019375-11019753 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 156 |
Conread position: | 1-363 |
Cow position: | chr6:13308667-13308301 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 145 |
Conread position: | 1-363 |
Cow position: | chr6:16418962-16418586 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 274 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 56, 28 |
Conread position: | 1-363 |
Cow position: | chr6:16704014-16703647 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 140 |
Conread position: | 1-363 |
Cow position: | chr6:16767118-16766744 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 156 |
Conread position: | 1-363 |
Cow position: | chr6:17595567-17595189 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 156 |
Conread position: | 1-363 |
Cow position: | chr6:20351371-20350993 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 156 |
Conread position: | 1-363 |
Cow position: | chr6:22679573-22679951 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 156 |
Conread position: | 1-363 |
Cow position: | chr6:26325481-26325103 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 147 |
Conread position: | 1-363 |
Cow position: | chr6:27151722-27151345 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 156 |
Conread position: | 1-363 |
Cow position: | chr6:27475132-27475507 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 46 |
Conread position: | 1-363 |
Cow position: | chr6:28064709-28065087 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 156 |
Conread position: | 1-363 |
Cow position: | chr6:28488847-28488482 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 144 |
Conread position: | 1-363 |
Cow position: | chr6:34129175-34129553 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 157 |
Conread position: | 1-363 |
Cow position: | chr6:36230808-36230430 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 156 |
Conread position: | 1-363 |
Cow position: | chr6:37387298-37387674 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 209 |
Conread position: | 1-363 |
Cow position: | chr6:40277777-40278155 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 156 |
Conread position: | 1-363 |
Cow position: | chr6:41389734-41389360 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 277 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 51, 155 |
Conread position: | 1-363 |
Cow position: | chr6:43087874-43087494 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 156 |
Conread position: | 1-363 |
Cow position: | chr6:50720816-50721194 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 142 |
Conread position: | 1-363 |
Cow position: | chr6:55238413-55238792 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 157 |
Conread position: | 1-363 |
Cow position: | chr6:56452377-56451999 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 156 |
Conread position: | 1-363 |
Cow position: | chr6:60378881-60379259 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 156 |
Conread position: | 1-363 |
Cow position: | chr6:62664493-62664871 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 156 |
Conread position: | 2-226 |
Cow position: | chr6:4467325-4467547 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 171 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 43, 95 |
Conread position: | 2-353 |
Cow position: | chr6:18497038-18497386 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 246 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 67, 147 |
Conread position: | 2-363 |
Cow position: | chr6:6474718-6474351 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 161 |
Conread position: | 2-363 |
Cow position: | chr6:8204899-8205284 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 84 |
Conread position: | 2-363 |
Cow position: | chr6:14065167-14065540 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 258 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 55, 192 |
Conread position: | 2-363 |
Cow position: | chr6:27172549-27172925 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 155 |
Conread position: | 2-363 |
Cow position: | chr6:43186823-43187201 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 211 |
Conread position: | 3-226 |
Cow position: | chr6:26668304-26668087 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 170 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 54, 146 |
Conread position: | 3-226 |
Cow position: | chr6:51717266-51717492 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 168 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 54, 138 |
Conread position: | 3-362 |
Cow position: | chr6:6720702-6721066 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 154 |
Conread position: | 3-363 |
Cow position: | chr6:11354443-11354082 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 145 |
Conread position: | 5-218 |
Cow position: | chr6:65929968-65930173 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 158 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 51, 126 |
Conread position: | 5-363 |
Cow position: | chr6:31913453-31913079 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 152 |
Conread position: | 8-219 |
Cow position: | chr6:20553516-20553312 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 165 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 49, 138 |
Conread position: | 18-363 |
Cow position: | chr6:27761435-27761798 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 141 |
Conread position: | 51-363 |
Cow position: | chr6:888331-888653 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 226 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 124, 100 |
Conread position: | 54-361 |
Cow position: | chr6:1402751-1402435 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 223 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 121, 100 |
Conread position: | 54-361 |
Cow position: | chr6:1407339-1407023 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 223 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 121, 100 |
Conread position: | 59-339 |
Cow position: | chr6:9586845-9587137 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 210 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 12, 94 |
Conread position: | 69-363 |
Cow position: | chr6:49826460-49826156 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 220 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 106, 82 |
Conread position: | 103-363 |
Cow position: | chr6:6556787-6557057 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 191 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 72, 48 |
Show alignments to all cow chromosomes.