Cow genome map

Conread name: rtra01_i24r1.y1

Conread position: 1-140
Cow position:
Alignm length: 146
Alignm identity: 115
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 1-140
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 1-140
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 39

Conread position: 1-219
Cow position:
Alignm length: 227
Alignm identity: 168
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 56, 144

Conread position: 1-219
Cow position:
Alignm length: 225
Alignm identity: 168
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 56, 147

Conread position: 1-225
Cow position:
Alignm length: 228
Alignm identity: 165
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 56, 93

Conread position: 1-225
Cow position:
Alignm length: 228
Alignm identity: 172
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 69, 146

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 171
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 56, 147

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 171
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 56, 149

Conread position: 1-226
Cow position:
Alignm length: 231
Alignm identity: 171
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 56, 146

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 171
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 56, 145

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 176
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 56, 149

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 172
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 56, 147

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 171
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 65, 145

Conread position: 1-226
Cow position:
Alignm length: 233
Alignm identity: 170
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 56, 148

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 170
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 56, 21

Conread position: 1-226
Cow position:
Alignm length: 236
Alignm identity: 174
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 151

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 175
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 55, 147

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 172
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 56, 147

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 178
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 56, 147

Conread position: 1-226
Cow position:
Alignm length: 239
Alignm identity: 175
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 56, 0

Conread position: 1-226
Cow position:
Alignm length: 230
Alignm identity: 166
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 65, 144

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 175
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 55, 146

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 176
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 56, 147

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 172
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 65, 147

Conread position: 1-226
Cow position:
Alignm length: 233
Alignm identity: 173
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 56, 95

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 169
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 56, 85

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 176
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 56, 143

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 170
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 55, 147

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 173
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 56, 113

Conread position: 1-268
Cow position:
Alignm length: 282
Alignm identity: 194
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 55, 156

Conread position: 1-310
Cow position:
Alignm length: 327
Alignm identity: 230
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 55, 156

Conread position: 1-316
Cow position:
Alignm length: 333
Alignm identity: 234
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 56, 156

Conread position: 1-349
Cow position:
Alignm length: 366
Alignm identity: 257
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 56, 219

Conread position: 1-357
Cow position:
Alignm length: 376
Alignm identity: 259
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 57, 24

Conread position: 1-358
Cow position:
Alignm length: 375
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-361
Cow position:
Alignm length: 371
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 140

Conread position: 1-362
Cow position:
Alignm length: 389
Alignm identity: 278
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 55, 147

Conread position: 1-362
Cow position:
Alignm length: 371
Alignm identity: 245
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 56, 142

Conread position: 1-363
Cow position:
Alignm length: 384
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 147

Conread position: 1-363
Cow position:
Alignm length: 378
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 154

Conread position: 1-363
Cow position:
Alignm length: 377
Alignm identity: 260
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 56, 46

Conread position: 1-363
Cow position:
Alignm length: 392
Alignm identity: 274
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 56, 105

Conread position: 1-363
Cow position:
Alignm length: 381
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 148

Conread position: 1-363
Cow position:
Alignm length: 378
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 395
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 225

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-363
Cow position:
Alignm length: 378
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 154

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 24

Conread position: 1-363
Cow position:
Alignm length: 379
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 142

Conread position: 1-363
Cow position:
Alignm length: 384
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 142

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 382
Alignm identity: 258
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 65, 209

Conread position: 1-363
Cow position:
Alignm length: 382
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 199

Conread position: 2-140
Cow position:
Alignm length: 143
Alignm identity: 113
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 64, 129

Conread position: 2-225
Cow position:
Alignm length: 230
Alignm identity: 171
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 55, 50

Conread position: 2-347
Cow position:
Alignm length: 356
Alignm identity: 241
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 148, 31

Conread position: 3-140
Cow position:
Alignm length: 144
Alignm identity: 110
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 3-363
Cow position:
Alignm length: 378
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 216

Conread position: 3-363
Cow position:
Alignm length: 385
Alignm identity: 262
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 54, 99

Conread position: 5-363
Cow position:
Alignm length: 376
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 152

Conread position: 13-363
Cow position:
Alignm length: 362
Alignm identity: 241
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 44, 137

Conread position: 36-363
Cow position:
Alignm length: 339
Alignm identity: 242
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 30, 11

Conread position: 162-363
Cow position:
Alignm length: 204
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 118, 59

Show alignments to all cow chromosomes.