Cow genome map

Conread name: rtra01_i24r1.y1

Conread position: 1-130
Cow position:
Alignm length: 136
Alignm identity: 108
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 1-137
Cow position:
Alignm length: 141
Alignm identity: 119
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 61, 0

Conread position: 1-140
Cow position:
Alignm length: 141
Alignm identity: 110
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 102, 0

Conread position: 1-147
Cow position:
Alignm length: 153
Alignm identity: 123
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 55, 147

Conread position: 1-214
Cow position:
Alignm length: 220
Alignm identity: 164
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 55, 147

Conread position: 1-215
Cow position:
Alignm length: 221
Alignm identity: 164
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 65, 147

Conread position: 1-215
Cow position:
Alignm length: 222
Alignm identity: 165
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 67, 148

Conread position: 1-218
Cow position:
Alignm length: 224
Alignm identity: 167
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 51, 142

Conread position: 1-219
Cow position:
Alignm length: 226
Alignm identity: 174
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 56, 148

Conread position: 1-219
Cow position:
Alignm length: 225
Alignm identity: 169
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 55, 147

Conread position: 1-224
Cow position:
Alignm length: 231
Alignm identity: 158
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 67, 141

Conread position: 1-226
Cow position:
Alignm length: 233
Alignm identity: 179
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 56, 148

Conread position: 1-226
Cow position:
Alignm length: 233
Alignm identity: 171
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 49, 105

Conread position: 1-226
Cow position:
Alignm length: 242
Alignm identity: 177
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 56, 159

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 172
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 56, 96

Conread position: 1-226
Cow position:
Alignm length: 233
Alignm identity: 173
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 55, 148

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 173
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 55, 145

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 173
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 56, 147

Conread position: 1-226
Cow position:
Alignm length: 235
Alignm identity: 176
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 56, 150

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 175
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 56, 147

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 172
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 56, 24

Conread position: 1-226
Cow position:
Alignm length: 233
Alignm identity: 171
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 56, 148

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 172
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 56, 152

Conread position: 1-226
Cow position:
Alignm length: 235
Alignm identity: 165
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 16, 157

Conread position: 1-226
Cow position:
Alignm length: 231
Alignm identity: 168
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 48, 146

Conread position: 1-226
Cow position:
Alignm length: 235
Alignm identity: 180
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 56, 170

Conread position: 1-226
Cow position:
Alignm length: 233
Alignm identity: 168
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 56, 146

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 179
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 56, 142

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 178
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 56, 147

Conread position: 1-226
Cow position:
Alignm length: 233
Alignm identity: 171
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 56, 148

Conread position: 1-226
Cow position:
Alignm length: 228
Alignm identity: 171
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 70, 143

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 171
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 56, 147

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 172
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 56, 147

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 179
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 65, 145

Conread position: 1-226
Cow position:
Alignm length: 232
Alignm identity: 173
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 56, 99

Conread position: 1-226
Cow position:
Alignm length: 231
Alignm identity: 176
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 56, 96

Conread position: 1-226
Cow position:
Alignm length: 234
Alignm identity: 163
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 141

Conread position: 1-226
Cow position:
Alignm length: 236
Alignm identity: 173
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 55, 153

Conread position: 1-266
Cow position:
Alignm length: 281
Alignm identity: 193
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 56, 156

Conread position: 1-291
Cow position:
Alignm length: 308
Alignm identity: 214
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 55, 156

Conread position: 1-302
Cow position:
Alignm length: 322
Alignm identity: 227
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 56, 213

Conread position: 1-339
Cow position:
Alignm length: 356
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-342
Cow position:
Alignm length: 360
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 157

Conread position: 1-358
Cow position:
Alignm length: 365
Alignm identity: 249
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 145, 169

Conread position: 1-361
Cow position:
Alignm length: 374
Alignm identity: 254
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 56, 35

Conread position: 1-362
Cow position:
Alignm length: 390
Alignm identity: 278
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 56, 147

Conread position: 1-362
Cow position:
Alignm length: 380
Alignm identity: 265
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 56, 236

Conread position: 1-362
Cow position:
Alignm length: 386
Alignm identity: 254
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 57, 139

Conread position: 1-362
Cow position:
Alignm length: 379
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-362
Cow position:
Alignm length: 377
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 209

Conread position: 1-362
Cow position:
Alignm length: 379
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 156

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-363
Cow position:
Alignm length: 379
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 142

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 91

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 156

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 96

Conread position: 1-363
Cow position:
Alignm length: 378
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-363
Cow position:
Alignm length: 386
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 100

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 142

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 228

Conread position: 1-363
Cow position:
Alignm length: 381
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 210

Conread position: 1-363
Cow position:
Alignm length: 381
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 210

Conread position: 1-363
Cow position:
Alignm length: 374
Alignm identity: 257
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 227, 35

Conread position: 1-363
Cow position:
Alignm length: 383
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 147

Conread position: 1-363
Cow position:
Alignm length: 381
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 211

Conread position: 1-363
Cow position:
Alignm length: 382
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 168

Conread position: 1-363
Cow position:
Alignm length: 379
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 187

Conread position: 1-363
Cow position:
Alignm length: 389
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 148

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 83

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 216

Conread position: 1-363
Cow position:
Alignm length: 381
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-363
Cow position:
Alignm length: 376
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 147

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 96

Conread position: 1-363
Cow position:
Alignm length: 373
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-363
Cow position:
Alignm length: 381
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 147

Conread position: 1-363
Cow position:
Alignm length: 381
Alignm identity: 268
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 56, 114

Conread position: 1-363
Cow position:
Alignm length: 378
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 157

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 156

Conread position: 1-363
Cow position:
Alignm length: 386
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 162

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 1-363
Cow position:
Alignm length: 380
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 1-363
Cow position:
Alignm length: 384
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 38

Conread position: 1-363
Cow position:
Alignm length: 393
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 97

Conread position: 1-363
Cow position:
Alignm length: 386
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 250

Conread position: 1-363
Cow position:
Alignm length: 378
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 32

Conread position: 2-149
Cow position:
Alignm length: 155
Alignm identity: 119
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 2-226
Cow position:
Alignm length: 232
Alignm identity: 178
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 48, 145

Conread position: 3-226
Cow position:
Alignm length: 230
Alignm identity: 172
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 54, 145

Conread position: 3-226
Cow position:
Alignm length: 230
Alignm identity: 175
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 54, 145

Conread position: 3-362
Cow position:
Alignm length: 387
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 210

Conread position: 3-363
Cow position:
Alignm length: 378
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 154

Conread position: 4-363
Cow position:
Alignm length: 378
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 208

Conread position: 6-363
Cow position:
Alignm length: 375
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 10

Conread position: 19-363
Cow position:
Alignm length: 369
Alignm identity: 254
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 37, 145

Conread position: 22-363
Cow position:
Alignm length: 359
Alignm identity: 249
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 34, 135

Conread position: 22-363
Cow position:
Alignm length: 359
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 135

Conread position: 22-363
Cow position:
Alignm length: 359
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 135

Conread position: 27-363
Cow position:
Alignm length: 354
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 130

Conread position: 43-363
Cow position:
Alignm length: 338
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 114

Conread position: 51-363
Cow position:
Alignm length: 324
Alignm identity: 229
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 124, 100

Conread position: 59-363
Cow position:
Alignm length: 318
Alignm identity: 220
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 12, 94

Conread position: 159-363
Cow position:
Alignm length: 208
Alignm identity: 161
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 5, 57

Show alignments to all cow chromosomes.