Cow genome map

Conread name: rtra03_h21r1.y1

Conread position: 2-613
Cow position:
Alignm length: 619
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 7

Conread position: 11-457
Cow position:
Alignm length: 461
Alignm identity: 311
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 34, 6

Conread position: 11-559
Cow position:
Alignm length: 564
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 17

Conread position: 13-298
Cow position:
Alignm length: 289
Alignm identity: 207
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 16, 129

Conread position: 13-331
Cow position:
Alignm length: 322
Alignm identity: 228
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 28, 156

Conread position: 13-366
Cow position:
Alignm length: 361
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 43

Conread position: 13-378
Cow position:
Alignm length: 374
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-410
Cow position:
Alignm length: 406
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-423
Cow position:
Alignm length: 421
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-459
Cow position:
Alignm length: 463
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 157

Conread position: 13-475
Cow position:
Alignm length: 480
Alignm identity: 305
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 32, 6

Conread position: 13-477
Cow position:
Alignm length: 480
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-574
Cow position:
Alignm length: 595
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 14

Conread position: 13-579
Cow position:
Alignm length: 583
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 26

Conread position: 13-594
Cow position:
Alignm length: 599
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-596
Cow position:
Alignm length: 602
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-596
Cow position:
Alignm length: 601
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 24

Conread position: 13-596
Cow position:
Alignm length: 603
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-596
Cow position:
Alignm length: 601
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-596
Cow position:
Alignm length: 603
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-596
Cow position:
Alignm length: 603
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-596
Cow position:
Alignm length: 603
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-596
Cow position:
Alignm length: 601
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 157

Conread position: 13-596
Cow position:
Alignm length: 602
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 199

Conread position: 13-596
Cow position:
Alignm length: 607
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-596
Cow position:
Alignm length: 603
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-596
Cow position:
Alignm length: 602
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 198

Conread position: 13-596
Cow position:
Alignm length: 596
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 182

Conread position: 13-596
Cow position:
Alignm length: 599
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 154

Conread position: 13-596
Cow position:
Alignm length: 603
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-596
Cow position:
Alignm length: 603
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-596
Cow position:
Alignm length: 604
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 9

Conread position: 13-601
Cow position:
Alignm length: 601
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-601
Cow position:
Alignm length: 607
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 199

Conread position: 13-601
Cow position:
Alignm length: 608
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 156

Conread position: 13-601
Cow position:
Alignm length: 608
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-601
Cow position:
Alignm length: 609
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-601
Cow position:
Alignm length: 608
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-601
Cow position:
Alignm length: 608
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 154

Conread position: 13-601
Cow position:
Alignm length: 610
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-601
Cow position:
Alignm length: 607
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-604
Cow position:
Alignm length: 608
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 161

Conread position: 13-604
Cow position:
Alignm length: 609
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-604
Cow position:
Alignm length: 612
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-604
Cow position:
Alignm length: 610
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 156

Conread position: 13-605
Cow position:
Alignm length: 609
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 353, 28

Conread position: 13-611
Cow position:
Alignm length: 624
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 202

Conread position: 13-613
Cow position:
Alignm length: 620
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 73

Conread position: 13-615
Cow position:
Alignm length: 628
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 28

Conread position: 14-408
Cow position:
Alignm length: 400
Alignm identity: 270
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 83, 59

Conread position: 14-582
Cow position:
Alignm length: 595
Alignm identity: 381
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 27, 5

Conread position: 14-586
Cow position:
Alignm length: 589
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 28

Conread position: 14-587
Cow position:
Alignm length: 582
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 198

Conread position: 14-613
Cow position:
Alignm length: 612
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 155

Conread position: 14-613
Cow position:
Alignm length: 618
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 206

Conread position: 14-625
Cow position:
Alignm length: 633
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 123

Conread position: 14-625
Cow position:
Alignm length: 632
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 109

Conread position: 15-469
Cow position:
Alignm length: 472
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 154

Conread position: 16-613
Cow position:
Alignm length: 620
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 50

Conread position: 19-528
Cow position:
Alignm length: 521
Alignm identity: 347
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 25, 119

Conread position: 20-578
Cow position:
Alignm length: 569
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 21

Conread position: 20-604
Cow position:
Alignm length: 615
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 140

Conread position: 22-587
Cow position:
Alignm length: 583
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 147

Conread position: 24-550
Cow position:
Alignm length: 553
Alignm identity: 352
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 68, 150

Conread position: 24-580
Cow position:
Alignm length: 571
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 143

Conread position: 25-400
Cow position:
Alignm length: 383
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 144

Conread position: 25-546
Cow position:
Alignm length: 535
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 192

Conread position: 28-601
Cow position:
Alignm length: 593
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 141

Conread position: 33-587
Cow position:
Alignm length: 583
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 197

Conread position: 37-382
Cow position:
Alignm length: 354
Alignm identity: 244
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 54, 26

Conread position: 39-625
Cow position:
Alignm length: 603
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 124

Conread position: 48-605
Cow position:
Alignm length: 575
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 120

Conread position: 48-605
Cow position:
Alignm length: 574
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 163

Conread position: 51-469
Cow position:
Alignm length: 434
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 118

Conread position: 60-604
Cow position:
Alignm length: 566
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 24

Conread position: 66-601
Cow position:
Alignm length: 553
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 102

Conread position: 71-625
Cow position:
Alignm length: 563
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 145

Conread position: 75-601
Cow position:
Alignm length: 542
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 93

Conread position: 84-601
Cow position:
Alignm length: 536
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 84

Conread position: 84-625
Cow position:
Alignm length: 553
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 110

Conread position: 96-625
Cow position:
Alignm length: 549
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 119

Conread position: 101-539
Cow position:
Alignm length: 455
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 66

Conread position: 104-410
Cow position:
Alignm length: 313
Alignm identity: 225
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 70, 63

Conread position: 106-304
Cow position:
Alignm length: 199
Alignm identity: 141
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 106-351
Cow position:
Alignm length: 248
Alignm identity: 178
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 68, 61

Conread position: 112-596
Cow position:
Alignm length: 511
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 55

Conread position: 115-505
Cow position:
Alignm length: 405
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 51

Conread position: 121-596
Cow position:
Alignm length: 486
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 90

Conread position: 125-604
Cow position:
Alignm length: 498
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 43

Conread position: 140-624
Cow position:
Alignm length: 503
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 71

Conread position: 144-587
Cow position:
Alignm length: 461
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 23

Conread position: 146-601
Cow position:
Alignm length: 473
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 9

Conread position: 159-596
Cow position:
Alignm length: 455
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 59

Conread position: 172-612
Cow position:
Alignm length: 457
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 37

Conread position: 177-587
Cow position:
Alignm length: 424
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 33

Conread position: 180-616
Cow position:
Alignm length: 456
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 30

Conread position: 197-576
Cow position:
Alignm length: 402
Alignm identity: 262
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 46

Conread position: 210-587
Cow position:
Alignm length: 392
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 25

Conread position: 219-542
Cow position:
Alignm length: 338
Alignm identity: 237
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 109, 27

Conread position: 219-573
Cow position:
Alignm length: 374
Alignm identity: 244
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 85, 27

Conread position: 219-601
Cow position:
Alignm length: 399
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 34

Conread position: 219-612
Cow position:
Alignm length: 406
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 32

Conread position: 219-613
Cow position:
Alignm length: 411
Alignm identity: 282
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 98, 10

Conread position: 219-615
Cow position:
Alignm length: 412
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 34

Conread position: 228-613
Cow position:
Alignm length: 402
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 25

Conread position: 253-587
Cow position:
Alignm length: 347
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 253-601
Cow position:
Alignm length: 365
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 253-601
Cow position:
Alignm length: 365
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 253-601
Cow position:
Alignm length: 366
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 253-601
Cow position:
Alignm length: 366
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 254-578
Cow position:
Alignm length: 334
Alignm identity: 229
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 71, 188

Conread position: 260-625
Cow position:
Alignm length: 375
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 224

Conread position: 263-601
Cow position:
Alignm length: 359
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 275-613
Cow position:
Alignm length: 356
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 299-611
Cow position:
Alignm length: 331
Alignm identity: 232
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 34, 302

Conread position: 307-625
Cow position:
Alignm length: 336
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 216

Conread position: 335-511
Cow position:
Alignm length: 182
Alignm identity: 140
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 15, 0

Show alignments to all cow chromosomes.